| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 954,787 | T→C | 7.2% | intergenic (+441/+62) | gluD → / ← glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 954,787 | 0 | T | C | 7.2% | 772.6 / 33.9 | 237 | intergenic (+441/+62) | gluD/glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base T (95/125); new base C (8/9); total (103/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATCAG > USA300TCH1516_ALE/954697‑954877 | ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCt < 1:2608751/91‑1 (MQ=255)ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCt < 2:302685/91‑1 (MQ=255) gTGGGACGACGAAATAAATTTTGCGAAGATTTCATTTCTGTCCCACTCAAGAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCtt < 2:3666978/91‑1 (MQ=21) gTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCtt < 1:3447530/91‑1 (MQ=255) tGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTa > 1:129749/1‑91 (MQ=255) gggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAc < 2:2895199/91‑1 (MQ=255) ggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAct > 2:517704/1‑91 (MQ=255) ggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAct < 1:2262156/91‑1 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg > 2:2268212/1‑91 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg > 1:2532139/1‑91 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg < 2:632348/91‑1 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTTTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTTAAATTATCCTActgc < 1:3368200/91‑1 (MQ=12) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgc < 2:3212824/91‑1 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAAACAGCAGTAAGATATTTCCAAATTGAAATTATCCTActgc < 2:3354672/91‑1 (MQ=14) gactaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAcggctg < 1:3118974/91‑1 (MQ=255) gacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgctg < 2:922124/91‑1 (MQ=255) gacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAAACAGCAGTAAGATATTTCCAAATTGAAATGATCCTActgctg < 1:3029723/91‑1 (MQ=9) acgaAAGAAATTTTGCGAAAATATCATTTCTGTCCCACTCACAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGt < 2:713705/91‑1 (MQ=255) cgaAATAAATGTTGCGAAAATATCATTTCTGTCCCACTCCAAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtt < 2:2852727/91‑1 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAGCGCTGtttttt > 2:3017930/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttttt > 2:2770935/1‑91 (MQ=255) taaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTta > 2:412666/1‑91 (MQ=255) ttttGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGt > 1:3725168/1‑91 (MQ=255) ttGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTaa < 1:3933243/91‑1 (MQ=255) gCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATa > 2:1614953/1‑91 (MQ=255) gCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATa < 1:2743018/91‑1 (MQ=255) cGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAg < 1:2936568/91‑1 (MQ=255) gAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGc > 2:2503723/1‑91 (MQ=255) gAAAATATCATTTCTGTCACACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGc < 2:2082659/91‑1 (MQ=255) atatCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCtata < 2:334720/91‑1 (MQ=255) atCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAtt > 2:36045/1‑91 (MQ=255) cATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAtttt > 2:138187/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:1672046/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:46237/1‑91 (MQ=255) tttCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTg < 1:430937/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa < 2:1797118/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa < 1:1528672/91‑1 (MQ=255) cTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAt < 2:1717837/91‑1 (MQ=255) cTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAt < 1:1638215/91‑1 (MQ=255) tGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt < 1:2032085/91‑1 (MQ=255) tGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt < 2:3307025/91‑1 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:1319529/91‑1 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:2703560/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:764551/91‑1 (MQ=255) ccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATg < 1:2739267/91‑1 (MQ=255) tCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGtttt < 1:1378715/91‑1 (MQ=255) acacAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGtttt < 2:3583014/88‑1 (MQ=255) cAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTa < 2:3126395/91‑1 (MQ=255) taaaaaaCAGCAGTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAg > 2:3386727/2‑91 (MQ=14) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt > 1:692766/1‑91 (MQ=255) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt > 1:628432/1‑91 (MQ=255) aaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGtt > 1:2806627/1‑91 (MQ=255) aaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGttt > 1:1731241/1‑91 (MQ=255) aCAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAAc > 1:737523/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:1286982/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:560304/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTCACTACTGTTTTTCATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 1:3153435/1‑91 (MQ=255) cagcagTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:2414620/1‑91 (MQ=17) agcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAt > 1:2371250/1‑91 (MQ=255) gcagTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAtt > 1:19252/1‑91 (MQ=18) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta < 2:383899/91‑1 (MQ=255) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta < 1:3783890/91‑1 (MQ=255) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta > 2:2032595/1‑91 (MQ=255) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta < 1:1125318/91‑1 (MQ=255) agTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtac < 1:3803159/91‑1 (MQ=255) gcaGGATAATTTCAATTTGGAAATATCTTACTGCTGTCTTTTCTAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtact > 2:966704/3‑91 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta < 2:3117957/91‑1 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:3397434/1‑91 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:1588291/1‑91 (MQ=255) tAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTaa > 2:391502/1‑91 (MQ=255) aaTTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAAt > 2:1524751/1‑91 (MQ=255) aTTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATg > 1:3517148/1‑91 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa > 2:1410984/1‑91 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa < 1:1043163/91‑1 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa > 1:810595/1‑91 (MQ=255) ttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGAc < 2:2803126/91‑1 (MQ=255) tCAATTTGGAAATATCTTACTGCTGTTTTTTTTTTTTTTTGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGAct > 2:2446578/1‑91 (MQ=255) tCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGAct < 1:2678251/91‑1 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTGTAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc < 1:3172877/91‑1 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc < 1:3246080/91‑1 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc < 2:2969945/91‑1 (MQ=255) aTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 1:1782353/1‑91 (MQ=255) aTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 1:2358193/1‑91 (MQ=255) aTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 1:913339/1‑91 (MQ=255) aTTTGGAAATATCTTACTGCCGTATTTTATAGTAATAGCGATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 2:177936/1‑91 (MQ=255) ttGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCttt < 2:1439194/91‑1 (MQ=255) tGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTta < 2:3662844/91‑1 (MQ=255) tGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTta > 1:256875/1‑91 (MQ=255) tGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTta < 2:3181860/91‑1 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATCTTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:224206/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTTTTTTTTTTTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:3376647/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:254757/1‑91 (MQ=255) aaTATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATAtt > 1:18580/1‑91 (MQ=255) atatCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATAttt < 2:326445/91‑1 (MQ=255) atCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTAt > 1:3207176/1‑91 (MQ=255) tCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATc < 2:53905/91‑1 (MQ=255) cTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATCa < 2:184744/91‑1 (MQ=255) cTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATCa < 1:1071445/91‑1 (MQ=255) ttACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTTGTGTGACATTACTACTTAATGACTTCTTTATATTTATCAg < 1:1414439/91‑1 (MQ=255) ttACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATCAg > 1:738174/1‑91 (MQ=255) | GGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTTATCAG > USA300TCH1516_ALE/954697‑954877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |