| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,158,443 | T→C | 7.7% | intergenic (+27/‑297) | uvrC → / → sdhC | UvrABC system protein C/Succinate dehydrogenase cytochrome b558 subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,158,443 | 0 | T | C | 7.7% | 760.3 / 33.9 | 253 | intergenic (+27/‑297) | uvrC/sdhC | UvrABC system protein C/Succinate dehydrogenase cytochrome b558 subunit |
| Reads supporting (aligned to +/- strand): ref base T (121/111); new base C (18/2); total (139/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.05e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
TTTTAAAAATATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAGTT > USA300TCH1516_ALE/1158353‑1158532 | tAAAAATATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGcc < 2:1188191/91‑1 (MQ=255) tAAAAATATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATCCTCATGcc > 2:3653999/1‑91 (MQ=255) aaaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGccc < 2:2202592/91‑1 (MQ=255) aaaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGccc > 1:1204385/1‑91 (MQ=255) aaaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGccc > 1:1483368/1‑91 (MQ=255) aaaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGccc > 1:1744087/1‑91 (MQ=255) aaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGcccc < 1:993135/91‑1 (MQ=255) aaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGcccc < 2:1500696/91‑1 (MQ=255) aaaaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGcccc > 1:3831666/1‑91 (MQ=255) aaTATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCaa > 1:1383629/1‑91 (MQ=255) atatAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCaaa > 2:3917654/1‑91 (MQ=255) tataGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCaaaa < 2:3114254/91‑1 (MQ=255) tataGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCaaaa < 2:2589933/91‑1 (MQ=255) tataGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCaaaa < 2:3731249/91‑1 (MQ=255) tATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATg > 1:3661977/1‑91 (MQ=255) aTTCCTGAAAACGTCGCAGAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGa < 1:859958/91‑1 (MQ=255) aTTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGa > 2:362406/1‑91 (MQ=255) ttCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGaa < 2:3148357/91‑1 (MQ=255) tGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAaataa > 1:2915120/1‑91 (MQ=255) aaaaCGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATCACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATg > 2:3052634/1‑91 (MQ=255) aaaCGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGt < 1:2821736/91‑1 (MQ=255) aaCGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGtt < 2:2026614/91‑1 (MQ=255) aaCGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGtt < 1:3232037/91‑1 (MQ=255) aCGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTa > 2:3011310/1‑91 (MQ=255) cGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTAc > 1:2325989/1‑91 (MQ=255) tCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACaa > 1:2935832/1‑91 (MQ=255) cGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCTAAAATATATGAAATAATGTTACAat > 1:3691445/1‑91 (MQ=255) cGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAat > 2:860155/1‑91 (MQ=255) gCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAata > 2:3232116/1‑91 (MQ=255) aaaGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATg < 2:1442583/91‑1 (MQ=255) aaaGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATg < 2:3536040/91‑1 (MQ=255) aaGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATgg < 2:2594869/91‑1 (MQ=255) aaGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATgg > 2:1243659/1‑91 (MQ=255) aGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGt > 2:1665923/1‑91 (MQ=255) aGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGt < 2:2843159/91‑1 (MQ=255) aGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGt < 1:532723/91‑1 (MQ=255) gAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCCTGCCCCCAAATATATGAAATAATGTTACAACATGGtt > 1:694119/1‑91 (MQ=255) aCCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTaa > 2:3370459/1‑91 (MQ=255) ccTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAAc > 2:503545/1‑91 (MQ=255) tACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACaa > 2:2392225/1‑91 (MQ=255) aTGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGt < 2:1094710/91‑1 (MQ=255) aTGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGt < 1:1003962/91‑1 (MQ=255) aTGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGt < 2:2201040/91‑1 (MQ=255) gAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTa > 1:2647212/1‑91 (MQ=255) aaCAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAt > 1:2176290/1‑91 (MQ=255) aaCAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAt > 1:1614004/1‑91 (MQ=255) cAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAttt > 2:2925515/1‑91 (MQ=255) aaTTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAtttt > 2:675655/1‑91 (MQ=255) aTTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAttttt > 1:913306/1‑91 (MQ=255) ttGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAtttttt > 2:585287/1‑91 (MQ=255) tGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTAttttttt > 2:306594/1‑91 (MQ=255) tGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAACATATGAAATAATGTTACAATATGGTTAACAAAGTTAttttttt > 1:3944178/1‑91 (MQ=255) cATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGa > 2:2386852/1‑91 (MQ=255) ataaataaATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGaa > 1:1764622/1‑91 (MQ=255) ataaataaATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGaa > 1:1673665/1‑91 (MQ=255) ataaataaATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTATGaa < 1:3122323/91‑1 (MQ=255) aaataaatTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATg < 2:1122000/91‑1 (MQ=255) aataaatTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGt > 1:2859773/1‑91 (MQ=255) taaatTACTGAGCGTGTGATTCATTCTCATGATCCGTATTATATGAAATAAGGTTACGATATGGTTAACAAAGTTATTTTTGGGAATGTAc < 2:454356/91‑1 (MQ=255) atTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTg > 1:2429481/1‑91 (MQ=255) atTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTg > 1:2538758/1‑91 (MQ=255) atTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTg > 1:3229858/1‑91 (MQ=255) atTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTg > 2:961563/1‑91 (MQ=255) ttACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTgg > 1:3602192/1‑91 (MQ=255) tACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGa < 2:1317360/91‑1 (MQ=255) ttggggCATGAGAATGATTCTCACGCCCCAATATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTCGAATGTACGTAGaa > 1:3564139/4‑91 (MQ=25) ttggggCATGAGAATGATTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGaa > 1:3286116/4‑91 (MQ=38) cTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAg > 2:1874185/1‑91 (MQ=255) ggggCATGAGAATGATTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGc > 2:1750655/2‑91 (MQ=38) ggggCATGAGAATGATTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGc > 1:765977/2‑91 (MQ=38) gggCGTGAGAATCATTCTCATGCCCCAAAAGATATGAAAGAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCg < 1:3914391/91‑1 (MQ=255) ggCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGt < 2:1011617/91‑1 (MQ=255) gagaATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCt < 1:2766837/91‑1 (MQ=255) gagaATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCt < 2:3335692/91‑1 (MQ=255) agaATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTa < 1:3057013/91‑1 (MQ=255) agaATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGCTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTa > 2:3496345/1‑91 (MQ=255) agaATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGCTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTa > 2:2788481/1‑91 (MQ=255) aatgaTTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTaaa > 2:1692229/5‑91 (MQ=255) aatgaTTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTaaa > 2:3297882/5‑91 (MQ=255) aatgaTTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTaaa > 1:826082/5‑91 (MQ=255) aaTCATTCTCATGCCACAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTaaa < 2:3855073/91‑1 (MQ=255) atgaTTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGCATGTACGTGGACGCGTTTTCTACAt > 2:3408749/4‑91 (MQ=255) atgaTTCTCACGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAAt > 1:1908583/4‑91 (MQ=255) aTCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAAt > 1:1101243/1‑91 (MQ=255) aTCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAAt > 1:3354691/1‑91 (MQ=255) aTCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAAt > 1:1442460/1‑91 (MQ=255) tCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATg > 1:593146/1‑91 (MQ=255) cATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATga > 2:1966246/1‑91 (MQ=255) aTTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATgag < 2:1812105/91‑1 (MQ=255) aTTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATgag > 2:980404/1‑91 (MQ=255) ttCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATgaga > 2:2807999/1‑91 (MQ=255) ttCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATgaga > 1:3831088/1‑91 (MQ=255) tctcATGCCACAAAATATGTGAAGTAATGTTACAAAATGGTTAACAAAGTTAGTTTTTTGGATGTACGAGTCAGCATTTTCTAAATTAGaa < 2:293861/91‑1 (MQ=255) ctcATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGaaa < 2:3264277/91‑1 (MQ=255) tcATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAg < 2:2734655/91‑1 (MQ=255) tcATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAg < 2:148444/91‑1 (MQ=255) tcATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAg < 1:3396554/91‑1 (MQ=255) tcATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAg > 1:2061023/1‑91 (MQ=255) cATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAGt > 2:276186/1‑91 (MQ=255) aTGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAGtt < 1:981985/91‑1 (MQ=255) | TTTTAAAAATATAGGTATTCCTGAAAACGTCGCAAAGAACCTACATGAACAATTGCATAAATAAATTACTGGGCGTGAGAATCATTCTCATGCCCCAAAATATATGAAATAATGTTACAATATGGTTAACAAAGTTATTTTTTTGAATGTACGTGGAAGCGTTTTCTAAATGAGAAAGTT > USA300TCH1516_ALE/1158353‑1158532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |