| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,221,653 | G→A | 10.5% | intergenic (+68/‑148) | rpoZ → / → coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,221,653 | 0 | G | A | 10.5% | 654.3 / 46.4 | 224 | intergenic (+68/‑148) | rpoZ/coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Reads supporting (aligned to +/- strand): ref base G (94/106); new base A (2/22); total (96/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 232 total aligned reads displayed.
GTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221563‑1221743 | gTGATTATTATGGTAAAGAATAGTGTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACg < 2:8593/91‑1 (MQ=255) tGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGc < 1:1266701/91‑1 (MQ=255) gATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCa < 1:1026483/91‑1 (MQ=255) gATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCa > 2:2411808/1‑91 (MQ=255) attattATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAc < 2:2348244/91‑1 (MQ=255) ttattaTGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAcc < 1:45332/91‑1 (MQ=255) attagGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTa < 2:454153/91‑1 (MQ=255) ttatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTAt < 1:1024094/91‑1 (MQ=255) tatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATg > 2:3326930/1‑91 (MQ=255) tatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTaca < 1:1366214/91‑3 (MQ=255) tatGGTAAAGAATAGTTTCGACCATTAAAAACATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATg > 1:3509017/1‑91 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGt > 2:2291441/1‑91 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 2:1154097/91‑4 (MQ=255) tGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTa < 1:669293/91‑1 (MQ=255) tGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacata < 1:192278/91‑5 (MQ=255) gTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAgg < 2:2069661/91‑1 (MQ=255) tAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgt < 1:260937/91‑1 (MQ=255) tAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgt < 2:3154093/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgt > 2:2986055/1‑91 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtgc < 1:991931/91‑2 (MQ=255) aGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtg < 2:1029066/91‑1 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtgt < 1:3598009/91‑1 (MQ=255) aaTAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtt < 1:2041659/91‑1 (MQ=255) aTAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttt > 2:3573719/1‑91 (MQ=255) tAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttt < 1:1600933/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 1:867888/91‑1 (MQ=255) ttCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTa > 2:2814700/1‑91 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg < 1:1164342/91‑1 (MQ=255) cGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGt > 2:1802695/1‑91 (MQ=255) gACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGtt > 2:1430759/1‑91 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTAt < 2:2141694/91‑1 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTAt < 2:2865242/91‑1 (MQ=255) ttAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCACATCAAACGCACCTATGCAGGCGTGTTTTTTTAGTTTATcc > 2:2185277/1‑91 (MQ=255) ttAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATcc > 1:2140931/1‑91 (MQ=255) ttAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATcc > 1:186685/1‑91 (MQ=255) tAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCa > 1:180912/1‑91 (MQ=255) tAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCa < 1:1157909/91‑1 (MQ=255) tAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCa < 2:1493270/91‑1 (MQ=255) aaaaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAt > 1:595399/1‑91 (MQ=255) aaaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATTCAAtg > 2:110784/1‑91 (MQ=255) aaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtga > 2:877278/1‑91 (MQ=255) aaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtga < 2:2209528/91‑1 (MQ=255) aaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtga < 1:3275354/91‑1 (MQ=255) tatGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGCTTTTTTAGTTTATCCAAtgatt > 2:3184380/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 1:704105/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 1:1755112/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATACCCAAATCAAACGCCCCTATGTAGGTGTATTTTTTTAGTTTATCCAAtcattga > 1:3679492/1‑91 (MQ=255) gtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattgat > 1:1107416/1‑91 (MQ=255) aaGCTAGACGTACATCTAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGtt < 2:3035465/91‑1 (MQ=255) aaGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGtt < 1:2002768/91‑1 (MQ=255) gCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTtat < 1:2249165/91‑1 (MQ=255) cTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTtata < 2:3307094/91‑1 (MQ=255) gACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataata < 1:881628/91‑1 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAAGGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat < 2:1985264/91‑1 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat < 1:1754194/91‑1 (MQ=255) tACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATAc < 2:501087/91‑1 (MQ=255) aCATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACt < 2:1010398/91‑1 (MQ=255) cATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTa > 1:3814206/1‑91 (MQ=255) cATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTa < 1:3392889/91‑1 (MQ=255) gcAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGCGTTATTTTAGTTTATCCAATGCTTGATGTTATAATAATACTaaa > 2:732501/2‑91 (MQ=255) aaaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAtt < 2:1532526/91‑1 (MQ=255) aaaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAtt < 1:1124071/91‑1 (MQ=255) aaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAttt < 2:1682141/91‑1 (MQ=255) aaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAttt < 2:3822389/91‑1 (MQ=255) aTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTg < 2:1714134/91‑1 (MQ=255) tACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGt > 2:2945960/1‑91 (MQ=255) aCGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTa > 1:1144051/1‑91 (MQ=255) aCGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTa > 1:2181849/1‑91 (MQ=255) cGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTAt < 1:3090554/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc > 1:1416952/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc > 2:2256365/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:1511459/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 2:2554701/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:3022370/91‑1 (MQ=255) cAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCta > 2:2645753/1‑91 (MQ=255) cAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCta > 2:685065/1‑91 (MQ=255) aaGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtat < 1:1895431/91‑1 (MQ=255) aaGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtat > 2:728826/1‑91 (MQ=255) aGGCATATCCAAATCAGACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtata < 2:3777012/91‑1 (MQ=255) ggCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaa > 2:2169686/1‑91 (MQ=255) gCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaa < 1:3240845/91‑1 (MQ=255) gCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaa < 2:1363345/91‑1 (MQ=255) cATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaa < 1:404891/91‑1 (MQ=255) cATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaa > 1:308048/1‑91 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:1542101/91‑1 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:2823199/91‑1 (MQ=255) tatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaataaa > 1:3188624/1‑91 (MQ=255) atCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAg > 2:1562397/1‑91 (MQ=255) tCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGt > 2:3959545/1‑91 (MQ=255) aaaaaaaCACACCTACATAGGTGCGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg > 1:2916120/5‑91 (MQ=37) aaTCAAACGCACCTATGTAGGTTTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 2:2603898/91‑1 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 2:46691/91‑1 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 1:3512303/91‑1 (MQ=255) tCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg > 2:780416/1‑91 (MQ=255) aaaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCa > 2:3065246/1‑91 (MQ=255) aaaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCa < 2:1595411/91‑1 (MQ=255) aaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATATGTATCTATAAAAAAGTAATGAGCAt > 1:386474/1‑91 (MQ=255) aCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAtt > 1:125663/1‑91 (MQ=255) aCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAtt > 2:1955499/1‑91 (MQ=255) cGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAttt > 1:264958/1‑91 (MQ=255) | GTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221563‑1221743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |