| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 77,984 | T→C | 7.8% | intergenic (+93/‑334) | USA300HOU_RS00350 → / → USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 77,984 | 0 | T | C | 7.8% | 862.9 / 42.4 | 289 | intergenic (+93/‑334) | USA300HOU_RS00350/USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (130/135); new base C (17/6); total (147/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTACTC > USA300TCH1516_ALE/77894‑78074 | aGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTT < 2:3240491‑M1/91‑1 (MQ=255) aGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTT > 2:3455486‑M1/1‑91 (MQ=255) gTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTT > 1:2283166‑M1/1‑91 (MQ=255) tataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTC < 1:1145107‑M1/91‑1 (MQ=255) ataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCA > 1:1252595‑M1/1‑91 (MQ=255) ataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCA < 1:283636‑M1/91‑1 (MQ=255) ataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCA < 2:2568794‑M1/91‑1 (MQ=255) taGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCAT > 1:853498‑M1/1‑91 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATTGATTTTTTCATAGC < 2:3358707‑M1/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGC < 2:1615603‑M1/91‑1 (MQ=255) ttCCGTGTATTGGGTTATAAGAAATTATGGGGATATGAAACGTACTAAGCTTAGCTATGAAGAAATCTAG‑GACGATAGATTTTTTCATAGc < 2:170550/91‑1 (MQ=21) ccGTGTATTTGATTCTAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTA > 2:2586526‑M1/1‑91 (MQ=255) ccGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTA < 1:1518‑M1/91‑1 (MQ=255) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAtt < 1:2171757/91‑1 (MQ=255) tgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTAatc < 2:1180021‑M1/91‑4 (MQ=255) tATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAttttt > 2:307702/1‑91 (MQ=255) tATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAttttt > 2:1841754/1‑91 (MQ=255) tATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTActttt < 1:3125797/91‑1 (MQ=255) tttGATTATAAGAAATTATGAGGATATTAAATATATTAAGATTAGCTATGAAAAAATCTAT‑CGTTATAGATTTCTTCATAGCTAatcttag < 2:1766633‑M1/91‑8 (MQ=255) tttGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑CGTCATAGATTTCTTCATAGCTAatcttag > 1:559112‑M1/1‑84 (MQ=255) gATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatag < 2:2255472/91‑1 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 2:1083897/91‑1 (MQ=255) tataAGATATTATGAGGATATTAAACATACTATGTTTAGCTATGAAGAAATCTAT‑GACGATAGATTGTTTCATAGCTATTTTttatagtta < 2:2172547/91‑1 (MQ=18) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagtta < 1:340966/91‑1 (MQ=255) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagtta < 2:801755/91‑1 (MQ=255) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAGTTTttatagtta < 1:3048356/91‑1 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat > 2:2200912/1‑91 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat > 2:682227/1‑91 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata < 1:2228738/91‑1 (MQ=255) aaGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttatag > 2:388206/1‑91 (MQ=255) gAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagag > 2:437582/1‑91 (MQ=255) aaaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagaga < 2:2897238/91‑1 (MQ=255) aTGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGCGAGGAGt > 1:1956885/1‑91 (MQ=255) tGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTa < 1:1103667/91‑1 (MQ=255) aGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGa > 1:583516/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 2:2784387/1‑91 (MQ=255) atatTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTg < 2:3169879/91‑1 (MQ=255) atatTAAACATACTAAGAGTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTg < 1:2426637/91‑1 (MQ=255) aaaCATACTAAGATTAGCTCTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTTCaa > 2:2086803/1‑90 (MQ=255) aaaCATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAg > 1:1563685/1‑91 (MQ=255) aaaCATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAg < 1:2923511/91‑1 (MQ=255) aaaCATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAg < 1:1645639/91‑1 (MQ=255) aaaCATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAg > 2:3848833/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 1:483009/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 2:872756/1‑91 (MQ=255) tACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGActct > 2:2468044/1‑91 (MQ=255) tAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTgg < 2:471180/91‑1 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGCTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 2:2412628/1‑91 (MQ=255) aaaatAGCTATGAAAAAATCTAT‑CGTCATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt > 2:1748504/5‑91 (MQ=17) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGCCTCTTGGAt > 1:3784346/1‑91 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 1:428575/91‑1 (MQ=255) aatAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt > 2:1029627/3‑91 (MQ=17) aTTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt > 2:1924693/1‑91 (MQ=255) aTTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt < 1:1559035/91‑1 (MQ=255) aTTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt < 1:3640573/91‑1 (MQ=255) ttAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt > 2:2497896/1‑91 (MQ=255) ttAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt > 2:1511807/1‑91 (MQ=255) atAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt > 1:2385044/2‑91 (MQ=17) aGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTaa > 2:2309844/1‑91 (MQ=255) aGCTATGAAAAAATCTAT‑CGTCATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTaa > 1:3286485/1‑91 (MQ=17) gCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTaaa > 2:2985784/1‑91 (MQ=255) gCTATGAAAAACTCTAT‑CGTCATAGCTTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGCGTAGACTGTCCAGACTCTTGGATTTTcaa > 1:2933711/1‑91 (MQ=17) gCTATGAAAAAATCTAT‑CGTCATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTaaa > 1:1026248/1‑91 (MQ=17) cTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt < 1:220371/91‑1 (MQ=255) cTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt < 2:2527232/91‑1 (MQ=255) cTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt > 2:3773655/1‑91 (MQ=17) aTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATcc > 2:1111310/1‑91 (MQ=255) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:3934888/91‑1 (MQ=255) gaagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGt < 1:802009/91‑1 (MQ=255) gaagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGt > 1:701206/1‑91 (MQ=255) gaagaaATCTAT‑GACGATAGATTTTGTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGt < 1:3690948/91‑1 (MQ=255) agaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaa > 2:9173/1‑91 (MQ=255) agaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaa < 1:2717772/91‑1 (MQ=255) agaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTACAGACTCTTGGATTTTAAATCCGTaa < 2:3594398/91‑1 (MQ=255) gaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaa > 1:1843114/1‑91 (MQ=255) aaTCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGACAGGAGTAGACTGTCCAGACACTTGGATTTTAAATTTGTaaaaa > 2:3684438/1‑91 (MQ=17) aTCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaa > 1:598805/1‑91 (MQ=255) aTCGAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAACCGTaaaaaa < 2:2025845/91‑1 (MQ=255) tCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaa > 2:2852213/1‑91 (MQ=255) tAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAAc < 1:2880051/91‑1 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 1:417249/1‑91 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 1:1716293/1‑91 (MQ=255) aggACGATAGGTTTTTTCATAGCTATTTTTTATAGTTGGAGAGAGGAGTAGACTGTCCTGACTCTTGGATTTTAAATACGAAAAAAAAACa < 2:2657547/89‑1 (MQ=14) aggACGAGAGATTGTGTCAAAGCGAGTTTTTATAGTTAGAGAGAGGAGTAGACTGTCCAGACGCTTGGATTTTAAATCAGAAAAAAAAACa < 2:3260881/89‑1 (MQ=255) gACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAg < 1:2624129/91‑1 (MQ=255) aCGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGt > 2:1816430/1‑91 (MQ=255) aCGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGt > 1:2187334/1‑91 (MQ=255) cGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCATACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTc > 2:348172/1‑91 (MQ=255) cGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTc > 2:1474814/1‑91 (MQ=255) cGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTc < 1:3007939/91‑1 (MQ=255) cGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTc < 1:3507670/91‑1 (MQ=255) gATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCa > 1:1199956/1‑91 (MQ=255) aTAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAg < 2:3277159/91‑1 (MQ=255) aTAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAg < 1:1394314/91‑1 (MQ=255) aTTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCttt < 2:563631/91‑1 (MQ=255) ttttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTa > 2:1406351/1‑91 (MQ=255) ttttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTa > 2:858795/1‑91 (MQ=255) tttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCATAAAAAAAACAAGTCAGCTTTAc < 1:2093346/91‑1 (MQ=255) tttCATATCTTTTTTTTATCGTTATAGAGAGGAGTAGCCTGTCCTGACTGTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTActt > 2:178757/1‑90 (MQ=255) tttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTActc > 1:2256908/1‑91 (MQ=255) | CAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTACTC > USA300TCH1516_ALE/77894‑78074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |