| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,405,986 | C→A | 8.4% | A77D (GCT→GAT) | trpG_2 → | Anthranilate synthase component 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,405,986 | 0 | C | A | 8.4% | 773.1 / 42.9 | 226 | A77D (GCT→GAT) | trpG_2 | Anthranilate synthase component 2 |
| Reads supporting (aligned to +/- strand): ref base C (104/103); new base A (7/12); total (111/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
CTGGTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATCGCA > USA300TCH1516_ALE/1405896‑1406076 | cTGGTCCAGGGCATCCATTAGACGATCAACAGTTAATGAGAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGc < 1:3904310/91‑1 (MQ=255)cTGGTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGCTTAGGGGc > 1:2934930/1‑91 (MQ=255) ggTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTc > 2:169069/1‑91 (MQ=255) ggTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTc > 2:228781/1‑91 (MQ=255) ggTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTc < 2:2329307/91‑1 (MQ=255) ggTCCAGGGCATCCATTAGACGATCAACACTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTAAGGGGCTc > 2:3444638/1‑91 (MQ=255) gTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCa < 1:1067281/91‑1 (MQ=255) gTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCa < 1:1067514/91‑1 (MQ=255) tCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAg > 1:1157685/1‑91 (MQ=255) ccAGGGCATCCATTAGACGATCAACAGTTAATAAAAATCATATCACCCTGTCAACTCAAACCCATTTTAGGTATTTGTTTAGGGGCTCAgg < 2:1225069/91‑1 (MQ=255) cAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGc > 1:691763/1‑91 (MQ=255) cAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGc > 1:359559/1‑91 (MQ=255) aGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGATCAGGCa < 1:511022/91‑1 (MQ=255) gggCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCAc < 2:566426/91‑1 (MQ=255) ggCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTCGGGGCTCAGGCACt > 1:1688274/1‑91 (MQ=255) ggCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACt < 1:1727221/91‑1 (MQ=255) ggCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACt < 2:1753649/91‑1 (MQ=255) gCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTg < 1:151680/91‑1 (MQ=255) gCAACCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTCTCAACACAAAACCATTTTAGGTATTTGTTAAGGGGCTCAGGCACTg > 2:3866602/1‑91 (MQ=255) tCCATTAGACGATCAACAGTTACTGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACt > 2:3326752/1‑91 (MQ=255) tCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACt > 1:1864026/1‑91 (MQ=255) ccATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACtt < 2:903089/91‑1 (MQ=255) ccATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACtt > 1:2205644/1‑91 (MQ=255) cATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTg > 2:872014/1‑91 (MQ=255) ttAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGtt < 2:1312043/91‑1 (MQ=255) ttAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGtt < 1:2985244/91‑1 (MQ=255) ttAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGtt > 2:1363938/1‑91 (MQ=255) ttAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGtt < 2:305724/91‑1 (MQ=255) tAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTta > 1:3095014/1‑91 (MQ=255) tAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTta > 2:2836802/1‑91 (MQ=255) aGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTtac < 2:1973844/91‑1 (MQ=255) cGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTtactac < 1:1385742/91‑1 (MQ=255) cGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTtactac < 1:780562/91‑1 (MQ=255) tCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGt > 1:3448240/1‑91 (MQ=255) cAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTg > 2:2864300/1‑91 (MQ=255) aCAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGga > 2:2274463/1‑91 (MQ=255) aCAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGga > 1:85273/1‑91 (MQ=255) cAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGgag > 2:1178763/1‑91 (MQ=255) aGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGgaga < 2:3649162/91‑1 (MQ=255) ttAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAg > 2:3939217/1‑91 (MQ=255) tAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGt < 1:3538059/91‑1 (MQ=255) aaTGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTc < 1:1015042/91‑1 (MQ=255) aaTGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTc < 1:3772759/91‑1 (MQ=255) aTGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCa > 2:2638041/1‑91 (MQ=255) gAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCAtt > 2:2420978/1‑91 (MQ=255) aaaTCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTaa < 1:364671/91‑1 (MQ=255) aaaTCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTaa > 2:3854411/1‑91 (MQ=255) aaaTCATATCAACCTATCAACACAAACCCATTTTAGGCATTTGTTTACGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTaa > 2:554974/1‑91 (MQ=255) aaTCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTaaa > 1:1813283/1‑91 (MQ=255) aaTCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTaaa < 2:3751419/91‑1 (MQ=255) aTCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAg > 1:731221/1‑91 (MQ=255) cATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGc > 1:1720667/1‑91 (MQ=255) atCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGAc < 2:1276994/91‑1 (MQ=255) tCAACCTATCAACACAAACCCATTTTAGGTATATGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACa < 1:3365684/91‑1 (MQ=255) cAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACaa < 2:2812640/91‑1 (MQ=255) ccTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGt > 1:2577574/1‑91 (MQ=255) ccTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGATCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGt < 2:2760224/91‑1 (MQ=255) tATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTa < 2:857584/91‑1 (MQ=255) tCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATg < 1:427975/91‑1 (MQ=255) tCAACACAAACCCATTTTAGGTATTTGTTTAGGGGATCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATg > 1:1313734/1‑91 (MQ=255) cAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGc < 1:1516455/91‑1 (MQ=255) cAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGc > 1:2591842/1‑91 (MQ=255) cAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGc > 1:2164222/1‑91 (MQ=255) cAACACAAACCCATTTTAGGTATTTGTTTAGGGGATCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGc < 1:1393263/91‑1 (MQ=255) acaAACCCATGTTAGGTATTTGTTGAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACgg < 1:3711146/91‑1 (MQ=255) aaCCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCaa > 1:2907127/1‑91 (MQ=255) cccATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAg < 1:2635990/91‑1 (MQ=255) ccATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGt > 2:3258558/1‑91 (MQ=255) ccATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGt > 1:3214278/1‑91 (MQ=255) cATTTTAGGTATTTGTTTAGGGGATCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGtt < 2:639224/91‑1 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa > 1:3733619/1‑91 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa < 2:3373814/91‑1 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa < 1:2201638/91‑1 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa > 2:2692055/1‑91 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa < 1:728694/91‑1 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa > 2:1625703/1‑91 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa < 1:1943007/91‑1 (MQ=255) ttttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGa > 2:1092170/1‑91 (MQ=255) tttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGAt < 1:2396775/91‑1 (MQ=255) tttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGAt < 1:2397030/91‑1 (MQ=255) ttAGGTATTTGTTTAGGGGCTCAGGCACTGAGTTGTTACTACGGGGGAGAAGTGATTCAAGGCGACAAGGTTATGCACGGCAAAGTTGATa < 1:3156496/91‑1 (MQ=255) ttAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATa > 2:2017483/1‑91 (MQ=255) aGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATaca > 2:2944261/1‑91 (MQ=255) ttGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAg < 2:702647/91‑1 (MQ=255) tGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAgg > 2:2477242/1‑91 (MQ=255) gTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGt > 2:691343/1‑91 (MQ=255) tttAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTATAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGtt < 1:2282954/91‑1 (MQ=255) tAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTtat > 2:3421858/1‑91 (MQ=255) tAGGGGCTCAGGCACTGACTTGTTACTACGGGGGAGGAGTCATTAAAGGCGAAAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTtat < 2:42875/91‑1 (MQ=255) ggggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTatat > 1:3484236/1‑91 (MQ=255) ggggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTatat < 1:1802663/91‑1 (MQ=255) ggggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTatat < 2:1757421/91‑1 (MQ=255) ggggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATCAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTatat > 2:2998972/1‑91 (MQ=255) ggggATCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTatat < 1:827334/91‑1 (MQ=255) gggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATc > 1:3743675/1‑91 (MQ=255) ggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATCg < 2:1008336/91‑1 (MQ=255) ggCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGAACGGCAAAGTTGATACACTAAAGGTTATATCg < 1:1783958/91‑1 (MQ=255) gCTCAGGCACTGTCTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGGTATATCgt > 1:3026361/1‑90 (MQ=255) cTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATCGca > 2:2174836/1‑91 (MQ=255) cTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATCGca > 2:2509508/1‑91 (MQ=255) | CTGGTCCAGGGCATCCATTAGACGATCAACAGTTAATGAAAATCATATCAACCTATCAACACAAACCCATTTTAGGTATTTGTTTAGGGGCTCAGGCACTGACTTGTTACTACGGTGGAGAAGTCATTAAAGGCGACAAGGTTATGCACGGCAAAGTTGATACACTAAAGGTTATATCGCA > USA300TCH1516_ALE/1405896‑1406076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |