| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,667,524 | G→T | 6.1% | intergenic (‑35/+91) | znuC_2 ← / ← nfo | High‑affinity zinc uptake system ATP‑binding protein ZnuC/putative endonuclease 4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,667,524 | 0 | G | T | 6.1% | 920.7 / 30.4 | 263 | intergenic (‑35/+91) | znuC_2/nfo | High‑affinity zinc uptake system ATP‑binding protein ZnuC/putative endonuclease 4 |
| Reads supporting (aligned to +/- strand): ref base G (127/119); new base T (2/15); total (129/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
TAGTAATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTATCATT > USA300TCH1516_ALE/1667434‑1667614 | tagtaATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAg > 1:2624575/1‑91 (MQ=255)tagtaATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAg > 1:236629/1‑91 (MQ=255) agtaATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGt > 2:593463/1‑91 (MQ=255) agtaATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGt < 1:694640/91‑1 (MQ=255) taATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACATTac < 2:2672636/91‑2 (MQ=255) taATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACATTac < 2:2894143/91‑2 (MQ=255) ttGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGt < 1:1090889/91‑1 (MQ=255) ttGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGt > 1:2670865/1‑91 (MQ=255) gACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGttt > 1:3604837/1‑91 (MQ=255) aCATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACATTACTGTTTa < 1:130100/91‑1 (MQ=255) aCATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTa > 1:871189/1‑91 (MQ=255) cATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACATTACTGTTTAc < 1:109152/91‑1 (MQ=255) cATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACATTACTGTTTAc < 1:1821528/91‑1 (MQ=255) aTTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACg < 1:3779560/91‑1 (MQ=255) aTTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACg < 2:1011337/91‑1 (MQ=255) aTTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACg < 2:1522948/91‑1 (MQ=255) tttttCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGa < 2:3238640/91‑1 (MQ=255) tttttCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGa > 2:559123/1‑91 (MQ=255) tttCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACt > 2:2604241/1‑91 (MQ=255) caattcaaAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCaa < 1:1533211/91‑1 (MQ=255) tcaaAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAAtt < 1:1520241/91‑1 (MQ=255) caaAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTa < 2:2558580/91‑1 (MQ=255) aaaGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAg > 1:2141741/1‑91 (MQ=255) aaaGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAg > 1:1145923/1‑91 (MQ=255) aGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTCGAc > 1:3560402/1‑91 (MQ=255) aGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGAc < 1:3541683/91‑1 (MQ=255) aCTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACaa < 2:2817201/91‑1 (MQ=255) tGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACaaaa < 1:2746387/91‑1 (MQ=255) tGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACaaaa < 2:3073879/91‑1 (MQ=255) tGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACaaaa < 1:1279685/91‑1 (MQ=255) ggTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAAt > 2:322813/1‑91 (MQ=255) tCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAag > 2:3902441/1‑91 (MQ=255) aTCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAagag > 2:3160030/1‑91 (MQ=255) tCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAgaga > 2:1144335/1‑91 (MQ=255) tCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAgaga < 1:1385582/91‑1 (MQ=255) cGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGat < 2:1676829/91‑1 (MQ=255) cGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGat > 1:3826585/1‑91 (MQ=255) tATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGatat > 1:579406/1‑91 (MQ=255) tATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGatat > 2:3132372/1‑91 (MQ=255) aTTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACACAATAAAGAGATATg > 1:1406141/1‑91 (MQ=255) aTTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATg > 2:2938227/1‑91 (MQ=255) aTTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATg < 2:266279/91‑1 (MQ=255) tctcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcc > 1:1270194/1‑91 (MQ=255) tctcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcc > 1:294675/1‑91 (MQ=255) tctcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcc > 1:2513479/1‑91 (MQ=255) tctcACCTCGCATTCAACTATACAACACCTAGTAACATCTGTAAACAGTGATGTTTACGACTCAATATTAGACCAAATAAAGAGATATGcc < 2:1754332/91‑1 (MQ=255) tcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcccc < 2:3828748/91‑1 (MQ=255) tcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcccc > 2:2431516/1‑91 (MQ=255) tcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGcccc < 1:2044093/91‑1 (MQ=255) tcACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGACATGcccc > 1:1957689/1‑91 (MQ=255) cACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGccccc < 1:3591035/91‑1 (MQ=255) cACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGccccc < 2:1831032/91‑1 (MQ=255) cACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGccccc > 1:2915369/1‑91 (MQ=255) aCCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCt > 1:879076/1‑91 (MQ=255) aCCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCt < 2:1451278/91‑1 (MQ=255) cTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTc < 2:716915/91‑1 (MQ=255) cTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTc > 1:3288093/1‑91 (MQ=255) cATTCAACTTTACAAGTCCTAGTAATGTATGTAATCCGTAATGTTTACGCCTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGt < 2:3427409/91‑1 (MQ=255) cATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGt < 2:3359038/91‑1 (MQ=255) cATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGt < 2:2175924/91‑1 (MQ=255) aTTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGtt > 2:136435/1‑91 (MQ=255) aTTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGACATATGCCCCCTTCAAGtt < 2:2123800/91‑1 (MQ=255) ttCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAGATTAGACAAAATAAAGAGATATGCCCCCTTCAAGttt < 1:3351492/91‑1 (MQ=255) tCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGtttt > 2:3719114/1‑91 (MQ=255) aaCTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTtttat > 1:3724915/1‑91 (MQ=255) aCTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTtttatt > 1:937125/1‑91 (MQ=255) tataCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTtttattta > 1:1918056/1‑91 (MQ=255) tataCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTtttattta < 2:2998162/91‑1 (MQ=255) ataCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTttatttat < 2:1604849/91‑1 (MQ=255) taCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATc > 2:2309737/1‑91 (MQ=255) taCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATc > 2:3895805/1‑91 (MQ=255) taCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATc > 2:542473/1‑91 (MQ=255) aCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCg < 1:1597723/91‑1 (MQ=255) aCAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCg > 1:633180/1‑91 (MQ=255) cAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGc > 1:323277/1‑91 (MQ=255) cAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGc > 2:620434/1‑91 (MQ=255) aaCTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCa < 1:2160899/91‑1 (MQ=255) aCTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCAt > 1:506557/1‑91 (MQ=255) aCTCCTAGTAAAATATGTAAAAAGTAATGTTTACGACTCAAAATTACACAAAATAAAGAAATATAACTCCATCAAGTTTTATTTATCACAt > 2:3530546/1‑91 (MQ=255) cTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCAtt < 2:2083442/91‑1 (MQ=255) ccTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTc > 1:3041518/1‑91 (MQ=255) tAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCtt < 1:2984951/91‑1 (MQ=255) tAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGaa < 2:2516372/91‑1 (MQ=255) tAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGaa > 2:1779224/1‑91 (MQ=255) aCATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAaga < 1:2266261/91‑1 (MQ=255) aCATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAaga < 2:1369875/91‑1 (MQ=255) cATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAagag > 2:2179566/1‑91 (MQ=255) atatGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAagaga < 1:2810391/91‑1 (MQ=255) atatGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAagaga < 2:422439/91‑1 (MQ=255) tatGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAagagag > 1:1689518/1‑91 (MQ=255) tatGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAagagag > 2:1192980/1‑91 (MQ=255) atGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGc > 2:1310533/1‑91 (MQ=255) tGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCa > 1:3410857/1‑91 (MQ=255) gTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCAt > 2:1807868/1‑91 (MQ=255) tAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCAtt < 1:3531901/91‑1 (MQ=255) aaCAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTAt < 1:628167/91‑1 (MQ=255) aaCAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTAt < 2:906148/91‑1 (MQ=255) cAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTATCa > 2:2861392/1‑91 (MQ=255) cAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTATCa > 2:2086834/1‑91 (MQ=255) gTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGCGCATTATCAtt > 2:831250/1‑91 (MQ=255) | TAGTAATTGACATTTTTCAATTCAAAGACTGGTGTCATCGTATTCTCACCTCGCATTCAACTATACAACTCCTAGTAACATATGTAAACAGTAATGTTTACGACTCAAAATTAGACAAAATAAAGAGATATGCCCCCTTCAAGTTTTATTTATCGCATTTCTTGAAGAGAGCATTATCATT > USA300TCH1516_ALE/1667434‑1667614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |