| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,268,572 | A→T | 8.6% | intergenic (‑1008/+78) | USA300HOU_RS11605 ← / ← ywpJ_2 | hypothetical protein/Phosphatase YwpJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,268,572 | 0 | A | T | 8.6% | 1125.4 / 73.1 | 336 | intergenic (‑1008/+78) | USA300HOU_RS11605/ywpJ_2 | hypothetical protein/Phosphatase YwpJ |
| Reads supporting (aligned to +/- strand): ref base A (135/172); new base T (12/17); total (147/189) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
Only 100 of 346 total aligned reads displayed.
AACAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAGCTAAA > USA300TCH1516_ALE/2268482‑2268662 | aaCAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTaa < 1:159421/91‑1 (MQ=255) aCAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAAt < 1:545087/91‑1 (MQ=255) aCAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAAt < 1:2675539/91‑1 (MQ=255) cAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATa < 1:389178/91‑1 (MQ=255) cAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATa > 1:2993835/1‑91 (MQ=255) cAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATa < 2:2040732/91‑1 (MQ=255) aaTATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAg < 1:2277858/91‑1 (MQ=255) atatTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGa < 2:814433/91‑1 (MQ=255) tatttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGaa > 2:2004574/1‑91 (MQ=255) tatttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AACACATTTTCTAATAGaa > 2:3783167/1‑91 (MQ=255) atttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAGATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGaaa < 1:3946645/91‑1 (MQ=255) tttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGaaaa > 2:594386/1‑91 (MQ=255) tttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGaaaa > 1:735190/1‑91 (MQ=255) ttattCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAAt > 1:2879140/1‑91 (MQ=255) attCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATaa > 1:926368/1‑91 (MQ=255) attCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATaa > 1:2749840/1‑91 (MQ=255) ttCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTATTAGAAAAtgtc < 2:156433/91‑4 (MQ=255) ttCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAAc < 2:1323351/91‑1 (MQ=255) ttCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAAc < 2:1070305/91‑1 (MQ=255) tctcATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGTAAAGTTATTTTCTATTAGAAAAtgtc < 2:3875091/91‑4 (MQ=25) ctcATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGTAAAGTTATTTTCTATTAGAAAAtgtct < 2:1343386/91‑5 (MQ=21) ctcATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACtt < 1:2249866/91‑1 (MQ=255) tcATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACttt < 1:1116522/91‑1 (MQ=255) tcATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACttt < 1:2946268/91‑1 (MQ=255) tAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACt < 2:2912437/91‑1 (MQ=255) tAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACt < 2:1308096/91‑1 (MQ=255) tAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACt < 1:2412326/91‑1 (MQ=255) tAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACt < 1:133484/91‑1 (MQ=255) gagTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGc < 2:2512955/91‑1 (MQ=255) gagTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGc < 2:2812421/91‑1 (MQ=255) gagTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGc < 1:1014770/91‑1 (MQ=255) agTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGct < 1:1065738/91‑1 (MQ=255) gTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGctc < 1:1146720/91‑1 (MQ=255) gTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGctc < 2:1898063/91‑1 (MQ=255) ttGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCtt > 2:2440916/1‑91 (MQ=255) ttGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCtt > 2:109339/1‑91 (MQ=255) gTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTg > 1:594960/1‑91 (MQ=255) gTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTg < 2:147489/91‑1 (MQ=255) gTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTg < 2:1215065/91‑1 (MQ=255) tCCAATTAAATATAGATGATTCAAAGATTTATAGGCATACAAAAGGGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGt < 2:917286/91‑1 (MQ=255) ccAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTa > 2:1781154/1‑91 (MQ=255) aTTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACAt > 1:3532421/1‑91 (MQ=255) aaaTATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTAc < 2:3374/91‑1 (MQ=255) aaaTATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTATACATTAc > 2:3435789/1‑91 (MQ=255) tataGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACtca < 2:224938/91‑1 (MQ=255) cataGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACtca < 2:3925389/90‑1 (MQ=255) ataGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACtcat < 2:1733890/91‑1 (MQ=255) taGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACtcatc > 2:2698981/1‑91 (MQ=255) taGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTCTACTGCTCTTTGTACATTACtcatc > 1:3679681/1‑91 (MQ=255) aGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACtcatca > 2:2131447/1‑91 (MQ=255) gatgatTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCaa < 1:612531/91‑1 (MQ=255) tgatTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGTAAATAACTTTACTGCTCTTTGTACATTACTCATCAACt < 2:195081/91‑1 (MQ=255) tgatTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACt < 1:475937/91‑1 (MQ=255) gatTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTa < 2:3822269/91‑1 (MQ=255) tCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTg < 2:2753719/91‑1 (MQ=255) tCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTg < 1:3713823/91‑1 (MQ=255) aaTATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaa > 2:1416848/1‑91 (MQ=255) atatTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaa > 1:2556764/1‑91 (MQ=255) atTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaatt < 1:312000/91‑1 (MQ=255) atTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaatt > 2:3225840/1‑91 (MQ=255) ttATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaattaa < 1:1488082/91‑1 (MQ=255) ataAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaattaaat < 1:2628532/91‑1 (MQ=255) ataAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaattaaat > 1:1262740/1‑91 (MQ=255) ataAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGtaaattaaat < 2:184266/91‑1 (MQ=255) taAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaata > 1:3774515/1‑91 (MQ=255) taAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaata > 2:3272254/1‑91 (MQ=255) aaGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataa < 2:2095254/91‑1 (MQ=255) aaGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataa < 2:3366082/91‑1 (MQ=255) aaGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCACCAACTATTGTAAATtaaataa > 1:1844079/1‑91 (MQ=255) aTACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataataaa > 2:2850461/1‑91 (MQ=255) aCAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataataaata > 2:2589996/1‑91 (MQ=255) aCAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataataaata < 1:964501/91‑1 (MQ=255) cAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATtaaataataaataa < 1:639142/91‑1 (MQ=255) aaaaGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAAc > 2:422932/1‑91 (MQ=255) aaaGAGCAGTAAAGTTATTTTCTATTAGAAAATGTC‑TTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACt > 1:565883/1‑91 (MQ=14) aaGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTa < 1:3595050/91‑1 (MQ=255) agagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGCAAATTAAATAATAAATAACtcc > 2:745192/1‑89 (MQ=255) gagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTAcc < 1:182260/91‑1 (MQ=255) gagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTAcc > 2:898130/1‑91 (MQ=255) gagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTAcc < 2:462820/91‑1 (MQ=255) gagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTAcc < 1:3769473/91‑1 (MQ=255) gagCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTAcc > 1:1948323/1‑91 (MQ=255) agCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCt > 1:2003710/1‑91 (MQ=255) gCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTa > 1:1640167/1‑91 (MQ=255) cAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAt > 1:1404738/1‑91 (MQ=255) aGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAtt < 2:2333256/91‑1 (MQ=255) aGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAtt < 1:2501321/91‑1 (MQ=255) aGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCGCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAtt < 2:3120592/91‑1 (MQ=255) t‑AAGACATTTTCTAATAGAAAATAGCTTTACTGCTCTTTGTACATTACTCGTCAACTATTGTAAATTAAATAATAAATAACTACCTAtttt < 2:3668964/91‑1 (MQ=255) t‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAtttt < 2:3510405/91‑1 (MQ=255) t‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTAtttt < 2:529671/91‑1 (MQ=255) gttaTTTTCTATTAGAAAATGTC‑TTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTttatta > 1:811537/4‑91 (MQ=25) aCATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTttatta < 1:3072845/91‑1 (MQ=255) cATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTtattat < 1:3249222/91‑1 (MQ=255) ttttCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTc > 1:519273/1‑91 (MQ=255) tttCTATTAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCa > 2:2382834/1‑91 (MQ=255) ttCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAg < 2:3081790/91‑1 (MQ=255) cTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAGCt > 1:2794479/1‑91 (MQ=255) aaTAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAGCTaa < 1:1540340/91‑1 (MQ=255) aaTAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAGCTaa < 1:3366260/91‑1 (MQ=255) | AACAATATTTATTCTCATAGAGTTTGTCCAATTAAATATAGATGATTCAAATATTTATAAGCATACAAAAGAGCAGT‑AAGACATTTTCTAATAGAAAATAACTTTACTGCTCTTTGTACATTACTCATCAACTATTGTAAATTAAATAATAAATAACTACCTATTTTATTATTCAGCTAAA > USA300TCH1516_ALE/2268482‑2268662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |