| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,559,830 | A→G | 11.1% | intergenic (+24/+99) | bcr_2 → / ← USA300HOU_RS13190 | Bicyclomycin resistance protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,559,830 | 0 | A | G | 11.1% | 578.1 / 46.1 | 207 | intergenic (+24/+99) | bcr_2/USA300HOU_RS13190 | Bicyclomycin resistance protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (104/78); new base G (3/20); total (108/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.97e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 208 total aligned reads displayed.
AGCCATTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGACATT > USA300TCH1516_ALE/2559740‑2559919 | gCCATTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAg < 1:2805189/91‑1 (MQ=255) ccATTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGc < 2:2684257/91‑1 (MQ=255) cATTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCa > 2:1161647/1‑91 (MQ=255) aTTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCaa > 1:1428174/1‑91 (MQ=255) ttCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCaaa > 2:2113491/1‑91 (MQ=255) ttCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCaaa > 1:2684274/1‑91 (MQ=255) cTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGa > 2:1196259/1‑91 (MQ=255) aTTAGTCAGTCTACAAATCATTTACTTTAAAGTGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGata < 2:1280764/91‑1 (MQ=255) aTTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGata > 1:612839/1‑91 (MQ=255) aTTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGata > 1:2426711/1‑91 (MQ=255) ttAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGatat < 2:689872/91‑1 (MQ=255) tAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCAAAACACTTCAACATAATTAGAACCCTAGCAAAGataga < 2:3379135/91‑3 (MQ=255) gtcagtcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGAtatctc > 2:3193749/1‑90 (MQ=255) gtcagtcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGAtatcta > 1:1943076/1‑91 (MQ=255) tcagtcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGAtatctat < 2:768200/91‑1 (MQ=255) tcagtcTACAAATCACTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACGTCAACATAATTAGAACCCTCGCAACGAtatctat < 2:1426144/91‑1 (MQ=255) cagtcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGAtatctatc > 1:2947017/1‑91 (MQ=255) cagtcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGAtatctatc > 1:2341925/1‑91 (MQ=255) tcTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCttt < 1:2733959/91‑1 (MQ=38) cTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTGAACATAATTAGAACCCTGACAAAGATAGATATCTTTg < 1:3326470/91‑1 (MQ=37) cTACAAATCATTTACTGTAAAATGATTAAAAAGCAACATATCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTg < 2:346135/91‑1 (MQ=37) tACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgc < 2:3147748/91‑2 (MQ=37) tACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgc < 2:1908064/91‑2 (MQ=37) tACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgc < 1:3870316/91‑2 (MQ=37) tACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgc < 2:3125098/91‑2 (MQ=38) tACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGt < 1:365674/91‑1 (MQ=255) aCAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgct < 2:2808278/91‑3 (MQ=37) cAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgcta < 1:1499121/91‑4 (MQ=37) cAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATCTCTATCTTTGTCa > 2:1490481/1‑91 (MQ=255) cAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCa > 2:1098600/1‑91 (MQ=255) cAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCa > 2:2180429/1‑91 (MQ=255) cAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCa > 1:3790848/1‑91 (MQ=255) cAAAGCAGTGACTGTAAGATGATTAAAAAGCAACATGTCGCATAACGCGTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTgcta < 2:1555126/91‑4 (MQ=16) aaaTCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAg > 1:3493715/1‑91 (MQ=255) aaaTCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAAGTAGAACCCTAGCAAAGATATCTATCTTTGTCAg < 2:3577280/91‑1 (MQ=255) aTCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAggg > 1:2786493/1‑91 (MQ=255) tCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGt < 2:41694/91‑1 (MQ=255) cATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTGCTAGGGtt < 2:608065/91‑1 (MQ=25) ttACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGttctt > 1:3001101/1‑91 (MQ=255) tACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGttcttc < 2:1563988/91‑1 (MQ=255) tACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGttcttc > 1:1207429/1‑91 (MQ=255) aCTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCGACATAACTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTtcttct < 2:2164326/91‑1 (MQ=255) aCTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTGACAAAGATAGATATCTTTGCTAGGGttctaat < 1:1592485/91‑4 (MQ=18) aCTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGttcttgt > 2:535930/1‑89 (MQ=255) ttAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTa > 1:3075421/1‑91 (MQ=255) aaTGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGaa > 2:3377937/1‑91 (MQ=255) aaTGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGaa < 1:2295551/91‑1 (MQ=255) gATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTa < 1:1626369/91‑1 (MQ=255) aaaaGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATgaga > 1:981755/1‑91 (MQ=255) aaGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATc > 1:255843/1‑91 (MQ=255) aGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCg < 2:3713624/91‑1 (MQ=255) aGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCg < 2:1952496/91‑1 (MQ=255) cAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGaa > 1:3213469/1‑91 (MQ=255) aCATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATc > 1:2150783/1‑91 (MQ=255) aCATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATc > 2:3164933/1‑91 (MQ=255) aCATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATc > 1:2152406/1‑91 (MQ=255) cATGTCGCATAACACTTCAACATAATTAGAACCCCAGCAAAGATATCTATCCCCGCCAGCGTCCTCCCTAACGAATTACGAGATCGCATCt > 2:1634530/1‑91 (MQ=255) cATGTCGCATAACACTTCAACATAACTAGAACCCTAGCACAGATATCTATCTTTGTCAGGGACCTTCCTTATGAATTATGAGATCGaaccc > 2:1489728/1‑88 (MQ=255) aTGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCtt > 1:1006819/1‑91 (MQ=255) aTGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCtt > 1:402255/1‑91 (MQ=255) aTGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCtt > 2:3690206/1‑91 (MQ=255) tCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCaa < 1:777359/91‑1 (MQ=255) gCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGCTCGAATCTTCAACt > 1:371988/1‑91 (MQ=255) gCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACt < 2:3815624/91‑1 (MQ=255) gCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCAAATCTTCAACt < 2:1742884/91‑1 (MQ=255) cATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTa < 1:468501/91‑1 (MQ=255) aaCACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTaaaa > 2:2127180/1‑91 (MQ=255) acTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTa > 2:2970623/1‑91 (MQ=255) cTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTAc > 1:1321265/1‑91 (MQ=255) ttCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACg > 2:2625660/1‑91 (MQ=255) tCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGc < 1:821945/91‑1 (MQ=255) tCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGc < 2:3187123/91‑1 (MQ=255) aaCATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCt < 2:1348184/91‑1 (MQ=255) aCATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCtt > 2:882000/1‑91 (MQ=255) aCATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCtt < 1:1098600/91‑1 (MQ=255) aCATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCtt > 1:1652391/1‑91 (MQ=255) aTAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAGATTACGCCTTCa > 2:3290953/1‑91 (MQ=255) aTAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAACATTACGCCTTCa > 2:3290558/1‑91 (MQ=255) aaTTAGAACCCTAGCACAGATATCTCTCTTCGTCAGGGTTCTTCTTTATGAATCATGAGACCGAATCTCCAACTAAACTTACGCCTTCATa > 2:2595401/1‑91 (MQ=255) aaTTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATa > 1:1122530/1‑91 (MQ=255) aTTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAg > 1:2629824/1‑91 (MQ=255) aTTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGATCTTCTTTATGAACTATGAGATCGAATGTTCAACTAAAATTACGCCTCCATAg > 1:3673613/1‑91 (MQ=255) ttAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGACTCTTCAACTAAAATTACGCCTTCATAGc > 2:2606308/1‑91 (MQ=255) gaaGAACCCTGACAAAGATAGATATCTTTGCTAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGc > 1:2111366/3‑91 (MQ=18) tAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCa < 2:3006748/91‑1 (MQ=255) tAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCa > 1:1234304/1‑91 (MQ=255) tAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCa < 1:3240269/91‑1 (MQ=255) aGAACCCTGACAAAGATAGATATCTTTGCTAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCaa > 2:83731/1‑91 (MQ=21) gAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAg < 1:3378397/91‑1 (MQ=255) gAACCCTAGCAAAGATATCTATCTTGGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAg < 2:22124/91‑1 (MQ=255) aaCCCTAGCAAAGATATCTATCTTTGTCGGGGTTCTTCTTTATGAATTATGAAATCCAATCTTCAACTAAAATTACGACTTCATATCAAgt > 2:2306418/1‑90 (MQ=255) aaCCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAgg > 2:1710924/1‑91 (MQ=255) aaCCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAgg < 1:1379123/91‑1 (MQ=255) aCCCTGACAAAGATAGATATCTTTGCTAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGa > 2:478249/1‑91 (MQ=25) cccTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGAc < 1:2294864/91‑1 (MQ=255) cccTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGAc > 1:556250/1‑91 (MQ=255) cccTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGAc < 1:1180638/91‑1 (MQ=255) ccTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGACa > 1:1772121/1‑91 (MQ=255) ccTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTAATAGCAAGGACa < 1:3024613/91‑1 (MQ=255) tAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGACAtt < 1:1020172/91‑1 (MQ=255) | AGCCATTCTATTAGTCAGTCTACAAATCATTTACTTTAAAATGATTAAAAAGCAACATGTCGCATAACACTTCAACATAATTAGAACCCTAGCAAAGATATCTATCTTTGTCAGGGTTCTTCTTTATGAATTATGAGATCGAATCTTCAACTAAAATTACGCCTTCATAGCAAGGACATT > USA300TCH1516_ALE/2559740‑2559919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |