| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,563,759 | A→G | 9.0% | intergenic (+24/‑114) | cycA_2 → / → nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,563,759 | 0 | A | G | 9.0% | 730.3 / 44.5 | 244 | intergenic (+24/‑114) | cycA_2/nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base A (117/105); new base G (4/18); total (121/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.87e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 249 total aligned reads displayed.
TGCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACT > USA300TCH1516_ALE/2563669‑2563849 | gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg < 1:332439/91‑1 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg > 1:518860/1‑91 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg > 2:2015081/1‑91 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg > 1:2235795/1‑91 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg < 1:1721231/91‑1 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg > 2:2147845/1‑91 (MQ=255) cTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGt < 2:3953654/91‑1 (MQ=255) tGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGtt < 1:3631296/91‑1 (MQ=255) tGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGtt < 2:1883374/91‑1 (MQ=255) tGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGtt < 2:1989939/91‑1 (MQ=255) aaaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCa < 1:643013/91‑1 (MQ=255) aaaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCa < 1:2646237/91‑1 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:1092653/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:3659694/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:1625704/91‑2 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActg < 1:144372/91‑3 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCg > 1:3518830/1‑91 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCg > 1:448090/1‑91 (MQ=255) cTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActga < 1:3557210/91‑4 (MQ=255) cTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGa > 1:2964576/1‑91 (MQ=255) tCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGAt > 1:3269465/1‑91 (MQ=255) tCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGAt < 2:1481165/91‑1 (MQ=255) cgcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATa > 1:1375669/1‑91 (MQ=255) gcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATAc > 2:1722134/1‑91 (MQ=255) gcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATAc < 1:291590/91‑1 (MQ=255) cgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACt < 2:2972378/91‑1 (MQ=255) gTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTa < 1:3600999/91‑1 (MQ=255) tATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTag < 2:1368627/91‑1 (MQ=255) tATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTag < 1:2853629/91‑1 (MQ=255) aagAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTaga < 2:2345687/89‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:400379/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:1293341/91‑1 (MQ=255) gAACAGCGACAAAATGACAGCGGTCATCTCGGATATGACAATCCATAATGTAGACGTCTCGCGCTAGTATCAGATCAACCGATACTAGAGt < 2:377592/91‑1 (MQ=255) gAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGt > 2:215544/1‑91 (MQ=255) aacaacGACAAAATGACTGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtt < 1:3387618/91‑1 (MQ=255) aacaacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtt < 1:3909611/91‑1 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt < 1:1909334/91‑1 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt > 2:2766209/1‑91 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt > 1:3734995/1‑91 (MQ=255) cGACAAAATGACAGCGGTCATTTCGGATATGACAATCAATAATTTAGACATCTCGCTCTAGTATCAGTTCAACCGAGACTAGAGttttttt < 2:878594/91‑1 (MQ=255) cGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGttttttt < 2:3187368/91‑1 (MQ=255) gACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTg < 2:3624270/91‑1 (MQ=255) aCAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGa > 2:2933092/1‑91 (MQ=255) aaaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaaa > 1:1119760/1‑91 (MQ=255) aaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAAt > 1:1355151/1‑91 (MQ=255) aaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAAt < 1:1816310/91‑1 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaattt < 2:51763/91‑4 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATa > 1:3550506/1‑91 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATa < 2:2700665/91‑1 (MQ=255) gACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAAc > 1:3180641/1‑91 (MQ=255) aCAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACt < 1:1135235/91‑1 (MQ=255) aCAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACt > 1:835982/1‑91 (MQ=255) cgctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 2:2538616/5‑91 (MQ=255) aGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTATAGTCTTTTTGAAAATAACtca > 2:2625580/1‑89 (MQ=255) gctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCa > 1:2372351/4‑91 (MQ=255) cGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAt > 1:205743/1‑91 (MQ=255) aTTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTAt < 1:748362/91‑1 (MQ=255) aGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAata < 1:2437440/91‑1 (MQ=255) aGATATGACAACCAATAATTTAAACACCTCGCTCTAGTATCAGTTCAACCGCTAATAGAGTTTTTTTGTAAATAACTTCATTTTCTAAata > 2:3516844/1‑91 (MQ=255) gATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAATCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAatat < 2:3048889/91‑1 (MQ=255) atatGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTCAAAATTATCTCTTTTTATTAttata > 2:2423957/1‑91 (MQ=255) tatGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAatatat < 2:22280/91‑1 (MQ=255) atGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATc > 1:59512/1‑91 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt < 1:2267186/91‑1 (MQ=255) atcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTc > 2:1303988/1‑91 (MQ=255) tcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCa < 1:2479449/91‑1 (MQ=255) tcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCa > 1:991586/1‑91 (MQ=255) aataatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCAtt < 1:2702119/91‑1 (MQ=255) ataatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTTTAATTATCTTCATTTTATCAATATATCTATGTCATTa > 2:1362362/1‑91 (MQ=255) taatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTAt > 1:1748871/1‑91 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg < 1:850262/91‑1 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc < 1:3025159/91‑1 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc > 1:1547333/1‑91 (MQ=255) ttAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGATTATATCTTCATTTTATCAATATATCTATGTCATTATGctt > 2:694612/1‑89 (MQ=255) aaCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTTTAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaa > 2:772068/1‑91 (MQ=255) aaCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaa > 2:2486561/1‑91 (MQ=255) aaCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaa < 2:2800623/91‑1 (MQ=255) aCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaaa > 1:2858438/1‑91 (MQ=255) aTCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAg < 1:1242294/91‑1 (MQ=255) tctcGCTCTCGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGt < 1:3779313/91‑1 (MQ=255) tctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGt < 2:64052/91‑1 (MQ=255) ctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTg < 1:1526810/91‑1 (MQ=255) ctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTg > 2:601112/1‑91 (MQ=255) tcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGa < 1:567786/91‑1 (MQ=255) tcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGa < 2:1646571/91‑1 (MQ=255) cGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAt < 1:1737857/91‑1 (MQ=255) atctctAGTATCGGTTGAACTGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAt > 2:2719207/3‑91 (MQ=38) gCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATa < 1:1934018/91‑1 (MQ=255) gCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATa > 1:3290063/1‑91 (MQ=255) ctctAGTATCAGTTCAACCGATACTAGAGTTTTTTTGTAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATaa > 2:1814722/1‑91 (MQ=255) ctctAGTATCAGTTCAACCGATACTAGAGTTTTGTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTGAAGAGTGATaa < 2:547575/91‑1 (MQ=255) tAGTATCGGTTGAACTGATACTAGAGTCTTTTTGCAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAat > 2:1535876/1‑91 (MQ=38) tATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGGTAAAATAtt > 1:902769/1‑91 (MQ=255) aTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTa < 1:1433057/91‑1 (MQ=255) aTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAT‑AAATATTaa > 2:1914185/1‑91 (MQ=255) tCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTaa > 1:2568852/1‑91 (MQ=255) tCAGTTCAACCGATACTAGAGTTTTTCTGAAAATAACTTCATTTTATCAATATACCTATGTCATTATGTCTTACAAGTGATAAAACATTaa > 2:3196052/1‑91 (MQ=255) tCAGTTCAACCGATACCAGAGTTTTCTTGACAATAACTTCACTTCATCAATCTCTCTATCTCATTATGCCTTAAAAGCGATAAAatatcac > 2:3373442/1‑88 (MQ=255) cAGTTCAACCGATACTAGAGTTTTTTTGGAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAAc < 2:3035469/91‑1 (MQ=255) cAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAAc < 1:661769/91‑1 (MQ=255) | TGCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACT > USA300TCH1516_ALE/2563669‑2563849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |