| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,563,763 | C→G | 10.1% | intergenic (+28/‑110) | cycA_2 → / → nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,563,763 | 0 | C | G | 10.1% | 789.1 / 50.7 | 242 | intergenic (+28/‑110) | cycA_2/nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base C (110/107); new base G (7/18); total (117/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.56e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTATTA > USA300TCH1516_ALE/2563673‑2563853 | aaaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCa < 1:625988/91‑1 (MQ=255) aaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGaa < 1:451013/91‑1 (MQ=255) aaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCaa > 1:2654451/1‑91 (MQ=255) aaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAAc > 1:3197970/1‑91 (MQ=255) aGCTGGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATAAGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:3292792/91‑2 (MQ=255) aGCTCGCGTCTGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAAcc < 2:2720218/91‑1 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:1092653/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:426087/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:1625704/91‑2 (MQ=255) aGCTCGCGTATAAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCACTCTAGTATCGGTTGAAct < 2:1023100/91‑2 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACCATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCg > 1:3518842/1‑91 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActg < 1:144372/91‑3 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCg > 2:1304298/1‑91 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCg > 2:2658767/1‑91 (MQ=255) cTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActga < 1:3557114/91‑4 (MQ=255) cTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGa > 1:2964576/1‑91 (MQ=255) tCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGAt < 2:1481165/91‑1 (MQ=255) cgcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATa > 1:1375669/1‑91 (MQ=255) cgcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATa > 1:2880383/1‑91 (MQ=255) gcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATAc > 2:1722134/1‑91 (MQ=255) tATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTag < 1:3717489/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:1293341/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:2400033/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag > 1:3809591/1‑91 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:537381/91‑1 (MQ=255) gAACAGCGACAAAATGACAGCGGTCATCTCGGATATGACAATCCATAATGTAGACGTCTCGCGCTAGTATCAGATCAACCGATACTAGAGt < 2:377592/91‑1 (MQ=255) aacaacGACAAAATGACTGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtt < 1:3387618/91‑1 (MQ=255) acaacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGttt > 1:2460425/1‑91 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt > 2:2065001/1‑91 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt > 2:298669/1‑91 (MQ=255) caacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttt > 2:2766209/1‑91 (MQ=255) cGACAAAATGACAGCGGTCATTTCGGATATGACAATCAATAATTTAGACATCTCGCTCTAGTATCAGTTCAACCGAGACTAGAGttttttt < 2:878594/91‑1 (MQ=255) cGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATTATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGttttttt < 2:3187311/91‑1 (MQ=255) cGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGttttttt < 2:2523106/91‑1 (MQ=255) gACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTg < 2:371059/91‑1 (MQ=255) aCAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGa > 2:2933092/1‑91 (MQ=255) cAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaa > 2:1364205/1‑91 (MQ=255) aaaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaaa > 1:3592562/1‑91 (MQ=255) aaaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaaa > 1:1119760/1‑91 (MQ=255) aaaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaaa > 1:1920166/1‑91 (MQ=255) aaTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAAt > 1:1355151/1‑91 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaaattt < 2:51763/91‑4 (MQ=255) gACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAAc < 1:3602159/91‑1 (MQ=255) gACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAAc > 1:3180641/1‑91 (MQ=255) aCAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACt < 1:1135235/91‑1 (MQ=255) aCAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACt > 1:835996/1‑91 (MQ=255) cgctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 1:2595195/5‑91 (MQ=255) aGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTATAGTCTTTTTGAAAATAACtca > 2:2625580/1‑89 (MQ=255) gctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCa > 1:946063/4‑91 (MQ=255) cGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAt < 1:3004769/91‑1 (MQ=255) ggTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAtt > 1:584297/1‑91 (MQ=255) tCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAATATATCTTCAtttt > 2:2198866/1‑91 (MQ=255) ttCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCa > 2:2803389/1‑91 (MQ=255) aGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAata < 1:1722842/91‑1 (MQ=255) atatGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAatata > 2:2423820/1‑91 (MQ=255) tatGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAatatat < 2:22280/91‑1 (MQ=255) atGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATc > 1:750121/1‑91 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt < 1:743659/91‑1 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt < 1:65776/91‑1 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt < 1:2267186/91‑1 (MQ=255) atgatTTGAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCACTTTATCAATATATCTATGTCATTa < 2:3568270/88‑1 (MQ=255) taatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTAt < 1:2013848/91‑1 (MQ=255) taatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTAt > 1:1748871/1‑91 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg < 1:850273/91‑1 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg > 1:275665/1‑91 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc > 1:1547333/1‑91 (MQ=255) ttAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGATTATATCTTCATTTTATCAATATATCTATGTCATTATGctt > 2:694612/1‑89 (MQ=255) aaCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTTTAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaa > 2:772068/1‑91 (MQ=255) aaCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaa > 2:2486561/1‑91 (MQ=255) aCATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaaa > 1:2857564/1‑91 (MQ=255) cATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaaaa < 1:3916740/91‑1 (MQ=255) aTCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAg < 1:1242294/91‑1 (MQ=255) tctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGt < 2:64052/91‑1 (MQ=255) ctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTg > 2:601112/1‑91 (MQ=255) ctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTg < 1:1526810/91‑1 (MQ=255) tcGCTCTCGTGTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGa < 2:3513712/91‑1 (MQ=255) tcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGa < 2:1646571/91‑1 (MQ=255) cGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAt < 1:1737857/91‑1 (MQ=255) ctctAGTATCAGTTCAACCGATACTAGAGTTTTTTTGTAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATaa > 2:1814722/1‑91 (MQ=255) ctctAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATaa < 1:3281260/91‑1 (MQ=255) ctctAGTATCAGTTCAACCGATACTAGAGTTTTGTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTGAAGAGTGATaa < 2:547575/91‑1 (MQ=255) tAGTATCGGTTGAACTGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAat > 1:254690/1‑91 (MQ=39) tAGTATCGGTTGAACTGATACTAGAGTCTTTTTGCAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAat > 2:1535876/1‑91 (MQ=38) tAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAat > 2:2383632/1‑91 (MQ=255) tAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAat > 1:3772824/1‑91 (MQ=255) aTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTa < 1:1433057/91‑1 (MQ=255) aTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAT‑AAATATTaa > 2:1914185/1‑91 (MQ=255) tCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTaa > 1:222230/1‑91 (MQ=255) tCAGTTCAACCGATACTAGAGTTTTTCTGAAAATAACTTCATTTTATCAATATACCTATGTCATTATGTCTTACAAGTGATAAAACATTaa > 2:3196052/1‑91 (MQ=255) cAGTTCAACCGATACTAGAGTTTTTTTGGAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAAc < 2:3035469/91‑1 (MQ=255) ggTTGAACTGTTACTAGAGTTTTTTTGAACATATCTTTATTTGATCCATATATCCATGTCATTCGGCCTTAAACTTGCTAAAATATTAACt > 2:2704634/2‑91 (MQ=255) aGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACt < 1:1861986/91‑1 (MQ=255) gTTGAACTGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTa > 1:2346989/1‑91 (MQ=255) ttCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTAt < 2:3101138/91‑1 (MQ=255) ctCAACCGATACTAGAGTTTTTTTGAAAATAACTTCTTTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTAt < 2:3919400/90‑1 (MQ=255) tCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTAtt < 2:1379464/91‑1 (MQ=255) cAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAACGTGATAAAATATTAACTATTa > 2:3305117/1‑91 (MQ=255) cAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTATTa > 1:181042/1‑91 (MQ=255) cAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTATTa > 2:1867168/1‑91 (MQ=255) cAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTATTa > 2:2138949/1‑91 (MQ=255) | GAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACTATTA > USA300TCH1516_ALE/2563673‑2563853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |