| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 253,973 | C→T | 5.8% | intergenic (+186/+176) | asbF → / ← USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 253,973 | 0 | C | T | 5.8% | 802.5 / 23.2 | 241 | intergenic (+186/+176) | asbF/USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (120/107); new base T (4/10); total (124/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.98e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
CACCTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTT > USA300TCH1516_ALE/253883‑254063 | cacCTTAAATCGAGTCATTGTTTATAAAGAAGGTGTACTTTATAT‑AAGTGTATAGCGATTGTCATACCCATTCACAGTAACAATCCTCAcc < 2:3012550/91‑1 (MQ=255) acCTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCa > 2:3939881/1‑91 (MQ=255) ccTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCAt < 2:624935/91‑1 (MQ=255) ccTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCAt < 2:2806199/91‑1 (MQ=255) cTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCCCCAtt < 2:2715459/91‑1 (MQ=255) cTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCAtt < 1:1094872/91‑1 (MQ=255) cTTAAAGCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCAtt < 2:110394/91‑1 (MQ=255) tCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAag > 2:2491056/1‑91 (MQ=255) cAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAaga > 2:2741016/1‑91 (MQ=255) aGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGt > 2:903740/1‑91 (MQ=255) aGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGt > 1:469445/1‑91 (MQ=255) aGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGt > 1:1241316/1‑91 (MQ=255) gTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGta < 1:2795328/91‑1 (MQ=255) gTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGta > 1:2220240/1‑91 (MQ=255) aTTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtttat > 2:1079139/1‑91 (MQ=255) aTTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtatat > 1:968139/1‑91 (MQ=255) aTTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtatat > 1:802175/1‑91 (MQ=255) aTTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtatat < 1:2736964/91‑1 (MQ=255) ttgtttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGGTtatata < 1:236489/91‑1 (MQ=255) ttgtttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtatata > 1:2561127/1‑91 (MQ=255) tgtttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATaa > 2:1678741/1‑91 (MQ=255) gtttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAc > 1:560900/1‑91 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGGTtatatactc < 1:1289295/91‑4 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:2197397/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:3836560/91‑1 (MQ=255) tgtAAGGAAGGTGTACTTTATAT‑AAGTAGATAGCGACGGTCATACCCATTCACAGTATCGATCCTCACCATTGAAAGGAGTATATAACCtt < 2:536913/91‑1 (MQ=255) gtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCttt < 1:3835372/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtttt < 1:3495494/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATAG‑AAGTATATAGCGATGGTCATACCCATTCACAGTAGCAATCCTCACTATTGAAAAGGTTATATACTCtttt < 2:1547909/91‑1 (MQ=25) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:407/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:1783545/1‑91 (MQ=255) aagaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCa < 2:551134/91‑1 (MQ=255) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCaa < 2:3903558/91‑1 (MQ=25) gacggTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAGTCCTCACTATTGAAAAGGTTATATACTCTTTTCAAt < 2:3145141/88‑1 (MQ=21) aagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCAAtg < 1:1464236/91‑2 (MQ=25) aagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATa > 2:3132607/1‑91 (MQ=255) agGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAg < 1:3815048/91‑1 (MQ=255) gtgtACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTg > 1:3938669/1‑91 (MQ=255) tACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAgg > 1:753780/1‑91 (MQ=255) acttATATAAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGt > 1:1247476/3‑91 (MQ=255) tatat‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTatat < 2:3309184/91‑1 (MQ=255) tatat‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTatat < 2:1328875/91‑1 (MQ=255) atct‑aAGTATATAGCGATGGTCATACCCATCCACAGTACCAATCCTCACCATTGCAAACCGCCTATAACCTTTTCAACCGTGCGGTATATg > 2:442158/4‑91 (MQ=255) at‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGat < 1:2226045/91‑1 (MQ=255) t‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGata < 1:1340952/91‑1 (MQ=255) aGTCTATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGgtaat < 1:3122341/91‑1 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:3845178/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:1307334/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:3067573/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTAAATGataat > 2:3696684/1‑91 (MQ=255) tatataGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGAtaataa < 1:1521936/91‑1 (MQ=255) atataGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaa < 1:93274/91‑1 (MQ=255) taGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaa < 1:3636465/91‑1 (MQ=255) taGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaa < 1:815851/91‑1 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaaaa > 2:1839859/1‑91 (MQ=255) gATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGc < 2:3821041/91‑1 (MQ=255) gATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATAATAATAAAAAAAAGc < 2:767540/91‑1 (MQ=255) tGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCt > 1:1001048/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1481924/91‑1 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt > 1:3212239/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt > 1:3058752/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1803400/91‑1 (MQ=255) tCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgtt < 1:1982180/91‑1 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 2:1591554/1‑91 (MQ=255) aTACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttgt < 1:1398631/91‑1 (MQ=255) tACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTc > 1:2974777/1‑91 (MQ=255) cccATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTcac < 1:2862222/91‑1 (MQ=255) ccATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTcaca > 2:634605/1‑91 (MQ=255) aTTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTAAATGATAATAAAAAAAAGCCTGTTGTCACAAt < 2:2883067/91‑1 (MQ=255) ttCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATg > 1:714582/1‑91 (MQ=255) cacaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGt > 2:1030736/1‑91 (MQ=255) acaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAACAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTc > 2:3228872/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa < 1:1556345/91‑1 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:1188798/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:2479701/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:3162596/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGGGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 2:3541906/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 2:3542832/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa < 1:1952242/91‑1 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 1:3265126/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 1:884439/1‑91 (MQ=255) tAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAg > 1:1630185/1‑91 (MQ=255) aaCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGa > 2:1223765/1‑91 (MQ=255) aaCAATCCACACCATAGAAAAGAGTATATAACCTATTAAATAGTGAGGAAAAAGAAAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGa < 2:2219415/91‑1 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac < 1:1626344/91‑1 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac > 2:430866/1‑91 (MQ=255) tataccTCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGaca > 2:1931054/5‑91 (MQ=17) aacgcTCAACATTTAAAAGAAAAAATAACTTAATCAATACTAAAATAAATAAAAAAAAAAAAAAGCCTGTTGTCACAATGGTCATAGacac < 2:2921694/87‑1 (MQ=255) aaTCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGacac < 2:2077378/91‑1 (MQ=255) ccTCACCATTGAAGAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAGAAAAAGCCTGTTGTCACGATGGTCATAGACACGAc < 1:203268/91‑1 (MQ=255) ccTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGAc > 1:581222/1‑91 (MQ=255) cTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACa > 1:2099861/1‑91 (MQ=255) tCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACAt > 2:1056376/1‑91 (MQ=255) tCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCACAGACACGACAt > 1:3575164/1‑91 (MQ=255) cACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATa > 1:187114/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc > 1:2575861/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc > 2:2312320/1‑91 (MQ=255) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 2:1657931/1‑91 (MQ=255) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 1:3464019/1‑91 (MQ=255) cATTGAAGAGAGTATATAACCTTTTCAATAGTGTGGTATACGATAATCAAAAAAAGCCTGTTGTCATCATGGTCATCGACACGACATACtt > 2:3675063/1‑91 (MQ=255) | CACCTTAAATCAAGTCATTGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTT > USA300TCH1516_ALE/253883‑254063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |