| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 253,991 | A→C | 6.9% | intergenic (+204/+158) | asbF → / ← USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 253,991 | 0 | A | C | 6.9% | 803.7 / 36.3 | 241 | intergenic (+204/+158) | asbF/USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (124/99); new base C (8/10); total (132/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 250 total aligned reads displayed.
TGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGAATATA > USA300TCH1516_ALE/253901‑254081 | tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 1:1129276/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:2197397/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:313742/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:3836560/91‑1 (MQ=255) tgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:3665497/91‑1 (MQ=255) tgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:536961/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtttt < 1:3106763/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATAG‑AAGTATATAGCGATGGTCATACCCATTCACAGTAGCAATCCTCACTATTGAAAAGGTTATATACTCtttt < 2:1547909/91‑1 (MQ=25) aaaGGAGGTGTACTTTATAT‑AACTATATAGCGATGGTCATACCCATCCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:2048330/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:1667829/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:3154564/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:1731353/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc < 1:2293851/91‑1 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc < 2:3205917/91‑1 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:534285/1‑91 (MQ=255) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCaa < 1:222089/91‑1 (MQ=25) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCaa < 2:3903558/91‑1 (MQ=25) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCaa < 1:3499799/91‑1 (MQ=255) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCaa < 1:1508950/91‑1 (MQ=255) aagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATa > 2:724955/1‑91 (MQ=255) agGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAg < 1:3815048/91‑1 (MQ=255) agGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAg < 1:1453870/91‑1 (MQ=255) agGTGTACTTTAGAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCAAtgg < 2:1635880/91‑3 (MQ=21) ggTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGt > 1:692346/1‑91 (MQ=255) ggTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTAACAGTAACAATCCTCACCATTGAAACGAGTATATAACCTTTTCAATAGt > 2:3006756/1‑91 (MQ=255) gtgtACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTg > 1:3938669/1‑91 (MQ=255) gtACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAg < 2:3860964/91‑1 (MQ=255) tACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAgg > 1:753780/1‑91 (MQ=255) cTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGta < 2:2958649/91‑1 (MQ=255) cTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGta > 1:1912619/1‑91 (MQ=255) acttATATAAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGt > 1:1247476/3‑91 (MQ=255) tatat‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTatat > 2:271707/1‑91 (MQ=255) tatat‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTatat < 2:1328875/91‑1 (MQ=255) t‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGata < 1:1340952/91‑1 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:1135667/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:3067573/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:3845178/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:1307334/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTAAATGataat > 2:3696684/1‑91 (MQ=255) tatataGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGAtaataa < 1:2770952/91‑1 (MQ=255) taGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATTGTGAGGTATATGATAATaaaaaa < 1:400023/91‑1 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaaaa > 2:1839859/1‑91 (MQ=255) cGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAg > 1:3268451/1‑91 (MQ=255) tGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCt > 1:1001048/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1481924/91‑1 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1803378/91‑1 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt > 1:3212239/1‑91 (MQ=255) tCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgtt < 1:1982019/91‑1 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 2:1591554/1‑91 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 1:996918/1‑91 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 1:1571862/1‑91 (MQ=255) aTACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttgt < 1:1398631/91‑1 (MQ=255) tACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGCGGTATATGATAAT‑AAAAAAAGCCTGTTGTca > 2:474127/1‑91 (MQ=255) tACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTc < 2:1170613/91‑1 (MQ=255) cacaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGt < 1:3842050/91‑1 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa > 2:1059595/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa < 1:1556345/91‑1 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa < 1:675515/91‑1 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa > 2:225243/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTCCAATAGCGCGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGCCa > 2:622840/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTGTTCAATAGTGCGGTACATGATAATAAAAAAAAGCCTGTTGTCACAATGGCCa > 2:3819451/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:2479701/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:1188798/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 2:395607/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:3162711/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 2:3542832/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 1:884439/1‑91 (MQ=255) tAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAg > 1:1630185/1‑91 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac < 1:1659342/91‑1 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac > 2:430866/1‑91 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac > 1:767386/1‑91 (MQ=255) tataccTCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGaca > 2:1930911/5‑91 (MQ=17) tataccTCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGaca > 2:1039041/5‑91 (MQ=17) ccTCACCATTGAAGAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAGAAAAAGCCTGTTGTCACGATGGTCATAGACACGAc < 1:203268/91‑1 (MQ=255) ccTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGAc > 1:2831715/1‑91 (MQ=255) cTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACa > 1:2099861/1‑91 (MQ=255) tCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCACAGACACGACAt > 1:3575164/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc > 1:2575786/1‑91 (MQ=255) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 1:3464019/1‑91 (MQ=255) cATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACtt < 2:2287138/91‑1 (MQ=255) gAAAAGAGTGTATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa < 1:3790852/91‑1 (MQ=255) aaaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg < 1:2938895/91‑1 (MQ=255) aaaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg < 2:812646/91‑1 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaacg > 2:2878882/1‑89 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAgg < 2:2426737/91‑1 (MQ=255) aaGAGTATATAACCTTTTCAATAGTGAGGTATAAGAAAAAAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGt < 2:1525293/91‑1 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 2:2913722/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 1:928638/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 1:2895063/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 2:2598440/1‑91 (MQ=255) atataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGa > 2:2822941/1‑91 (MQ=255) tataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaa > 2:660049/1‑91 (MQ=255) gtaACCTTTTCAATAGTGAGGTATATGATAATAAAATAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat < 2:3910272/90‑1 (MQ=255) ataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat > 2:3466272/1‑91 (MQ=255) ataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat > 2:264506/1‑91 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 1:1720042/91‑1 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 2:3274291/91‑1 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 1:561870/91‑1 (MQ=255) aCCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaatata > 2:1419835/1‑91 (MQ=255) aCCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaatata < 2:1003716/91‑1 (MQ=255) | TGTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGAATATA > USA300TCH1516_ALE/253901‑254081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |