| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 253,992 | C→T | 7.2% | intergenic (+205/+157) | asbF → / ← USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 253,992 | 0 | C | T | 7.2% | 779.9 / 26.8 | 241 | intergenic (+205/+157) | asbF/USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (125/98); new base T (8/10); total (133/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGAATATA > USA300TCH1516_ALE/253902‑254081 | tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 1:1129276/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:313742/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAcc < 2:3836560/91‑1 (MQ=255) tgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:1091178/91‑1 (MQ=255) tgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:536961/91‑1 (MQ=255) tgtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:3665497/91‑1 (MQ=255) gtAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCttt < 1:2609629/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATAG‑AAGTATATAGCGATGGTCATACCCATTCACAGTAGCAATCCTCACTATTGAAAAGGTTATATACTCtttt < 2:1547909/91‑1 (MQ=25) aaaGGAGGTGTACTTTATAT‑AACTATATAGCGATGGTCATACCCATCCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:2048330/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 2:1783173/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:534285/1‑91 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc < 2:3205917/91‑1 (MQ=255) aaaGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc < 1:2293851/91‑1 (MQ=255) aagaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCa > 1:2143534/1‑91 (MQ=255) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCaa < 2:3903558/91‑1 (MQ=25) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCaa < 1:1508950/91‑1 (MQ=255) agaagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCaa < 1:3499799/91‑1 (MQ=255) aagGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATa > 2:724955/1‑91 (MQ=255) agGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAg < 1:3815048/91‑1 (MQ=255) agGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAg < 1:1453870/91‑1 (MQ=255) agGTGTACTTTAGAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCAAtgg < 2:1635880/91‑3 (MQ=21) ggTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGt > 1:692346/1‑91 (MQ=255) ggTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTAACAGTAACAATCCTCACCATTGAAACGAGTATATAACCTTTTCAATAGt > 2:3006756/1‑91 (MQ=255) gtgtACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTg > 1:3938669/1‑91 (MQ=255) gtACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAg < 2:3860964/91‑1 (MQ=255) tACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAgg > 1:753780/1‑91 (MQ=255) cTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGta < 2:2958649/91‑1 (MQ=255) acttATATAAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGt > 1:1247476/3‑91 (MQ=255) atat‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATg > 2:1258507/1‑91 (MQ=255) at‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGat > 2:2205965/1‑91 (MQ=255) t‑aAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGata < 1:1340952/91‑1 (MQ=255) aaGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataa < 2:2769104/91‑1 (MQ=255) aGTCTATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGgtaat < 1:3122341/91‑1 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:3067573/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:3845178/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTAAATGataat > 2:3696684/1‑91 (MQ=255) taGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATTGTGAGGTATATGATAATaaaaaa < 1:400023/91‑1 (MQ=255) taGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaa > 1:1272383/1‑91 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATaaaaaaaa > 2:1839859/1‑91 (MQ=255) cGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAg > 1:3268451/1‑91 (MQ=255) tGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCt > 1:1001048/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1803378/91‑1 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt < 1:1481900/91‑1 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt > 1:3212239/1‑91 (MQ=255) gTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgt > 1:3058752/1‑91 (MQ=255) tCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgtt < 1:1982019/91‑1 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 1:996918/1‑91 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCtgttg > 1:1571862/1‑91 (MQ=255) tACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGCGGTATATGATAAT‑AAAAAAAGCCTGTTGTca > 2:474127/1‑91 (MQ=255) tACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTc < 2:1170613/91‑1 (MQ=255) cccATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTcac < 1:2862612/91‑1 (MQ=255) aTTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTAAATGATAATAAAAAAAAGCCTGTTGTCACAAt < 2:2883067/91‑1 (MQ=255) ttCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATg < 1:2455469/91‑1 (MQ=255) cacaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGt < 1:3842050/91‑1 (MQ=255) cacaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGt < 2:1574105/91‑1 (MQ=255) cacaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGt > 2:1030736/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa > 2:1059595/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa > 2:225243/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCa < 1:675515/91‑1 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTCCAATAGCGCGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGCCa > 2:622840/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTGTTCAATAGTGCGGTACATGATAATAAAAAAAAGCCTGTTGTCACAATGGCCa > 2:3819451/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 2:395607/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:3162596/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 1:884439/1‑91 (MQ=255) gTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATa > 2:3542832/1‑91 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac < 1:1659342/91‑1 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac < 1:1626344/91‑1 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac > 2:430866/1‑91 (MQ=255) aCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGac > 1:767386/1‑91 (MQ=255) tataccTCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGaca > 2:1931054/5‑91 (MQ=17) ccTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGAc > 1:1541584/1‑91 (MQ=255) ccTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGAc < 1:203218/91‑1 (MQ=255) ccTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGAc > 1:2831715/1‑91 (MQ=255) cTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACa > 1:2099861/1‑91 (MQ=255) tCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCACAGACACGACAt > 1:3575164/1‑91 (MQ=255) cACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATa > 1:187114/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc > 1:2575786/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc > 2:2312320/1‑91 (MQ=255) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 2:1657931/1‑91 (MQ=255) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 1:3464019/1‑91 (MQ=255) gAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa > 2:1489330/1‑91 (MQ=37) gAAAAGAGTGTATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa < 1:3790852/91‑1 (MQ=255) aaaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg < 2:812646/91‑1 (MQ=255) aaaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg > 1:1392686/1‑91 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAgg < 2:2426737/91‑1 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAgg > 2:2602955/1‑91 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAgg > 1:1134983/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 2:2913722/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt > 1:928638/1‑91 (MQ=255) atataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGa > 2:2822941/1‑91 (MQ=255) tataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaa > 2:660049/1‑91 (MQ=255) gtaACCTTTTCAATAGTGAGGTATATGATAATAAAATAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat < 2:3910272/90‑1 (MQ=255) ataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat < 1:2901450/91‑1 (MQ=255) ataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat > 2:3466272/1‑91 (MQ=255) ataACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaat > 2:264506/1‑91 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 1:1719968/91‑1 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 2:3274291/91‑1 (MQ=255) taACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaata < 1:561870/91‑1 (MQ=255) aCCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaatata > 2:1419835/1‑91 (MQ=255) aCCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGaatata < 2:1003716/91‑1 (MQ=255) | GTTTGTAAAGAAGGTGTACTTTATAT‑AAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCTGAATATA > USA300TCH1516_ALE/253902‑254081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |