| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 401,399 | A→C | 7.0% | intergenic (‑184/‑57) | USA300HOU_RS01845 ← / → sutR | hypothetical protein/HTH‑type transcriptional regulator SutR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 401,399 | 0 | A | C | 7.0% | 647.8 / 37.8 | 214 | intergenic (‑184/‑57) | USA300HOU_RS01845/sutR | hypothetical protein/HTH‑type transcriptional regulator SutR |
| Reads supporting (aligned to +/- strand): ref base A (91/106); new base C (4/11); total (97/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 | |||||||||||
Only 100 of 227 total aligned reads displayed.
TAAACAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACG > USA300TCH1516_ALE/401309‑401487 | tAAACAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACaaa > 1:1058049/1‑91 (MQ=255)tAAACAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACaaa < 2:3381027/91‑1 (MQ=255) aaCAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAata > 2:1894326/1‑91 (MQ=255) cAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAAtata > 1:721108/1‑91 (MQ=255) aaTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACtatat < 2:3189295/91‑2 (MQ=255) aaTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAg < 1:3871635/91‑1 (MQ=255) aaTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAg < 1:1504609/91‑1 (MQ=255) aTTCTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACtatatt < 1:3188831/91‑3 (MQ=255) aTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGt > 2:2959530/1‑91 (MQ=255) aTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGt > 2:2121951/1‑91 (MQ=255) aTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGt < 2:2375774/91‑1 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACTATATTTGt < 1:2938512/91‑1 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGt > 2:2456574/1‑91 (MQ=255) aTGACTTGTAGGCGTTCAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACTATATTTGt < 2:3031480/91‑1 (MQ=255) tGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACTATATTTGTc < 1:1636899/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCGTACATAGTTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 1:2652616/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa > 1:3842483/1‑91 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 2:407004/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 2:1503428/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 2:3715035/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa > 2:2762661/1‑91 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGACAATCATATTTTTTTGTGTGGATTTGACAAATATAGTTGTCa < 1:3763877/91‑1 (MQ=255) ttGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCaaaa > 1:1976808/1‑91 (MQ=255) ttGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCaaaa > 2:1536511/1‑91 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc > 2:2326748/1‑91 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc > 2:2190040/1‑91 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc > 1:3072416/1‑91 (MQ=255) cGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCa < 2:1308107/91‑1 (MQ=255) cGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCa < 2:510442/91‑1 (MQ=255) ttGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCata < 1:2906252/91‑1 (MQ=255) tGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCatat > 1:3541085/1‑91 (MQ=255) gAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATc > 2:3815120/1‑91 (MQ=255) gAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATc > 1:1317199/1‑91 (MQ=255) tgtttgttTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAGTATAGTTGTCAAAAAGACGCATATCAttt > 2:1125992/1‑91 (MQ=255) gtttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTa > 1:1304457/1‑91 (MQ=255) gtttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTa < 1:141137/91‑1 (MQ=255) ttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACa > 1:2083979/1‑91 (MQ=255) tgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAg < 2:3849986/91‑1 (MQ=255) tgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAg < 1:3916662/91‑1 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt > 1:1013343/1‑91 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 2:2962274/91‑1 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 1:967733/91‑1 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 1:2049576/91‑1 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 1:2859291/91‑1 (MQ=255) ttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgtgt < 1:1955482/91‑1 (MQ=255) cAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTaa < 2:2936853/91‑1 (MQ=255) aaaTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAtt > 1:836250/1‑91 (MQ=255) aaaTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAtt < 1:3101432/91‑1 (MQ=255) aaaTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAtt > 2:2341144/1‑91 (MQ=255) aTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTaa < 2:3414749/91‑1 (MQ=255) tGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAg > 2:2067599/1‑91 (MQ=255) catacataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAg > 2:2886958/1‑91 (MQ=255) atacataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGt > 1:492980/1‑91 (MQ=255) tacataGGTGGATCATCATATTTTTTGGTGTAGATTTGACACATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGtt > 2:1296721/1‑91 (MQ=255) acataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTg < 2:3879978/91‑1 (MQ=255) acataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTg > 1:3888288/1‑91 (MQ=255) cataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGa > 2:2745124/1‑91 (MQ=255) ataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGAt < 2:3131425/91‑1 (MQ=255) ataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGAt < 2:1988047/91‑1 (MQ=255) ggTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCg > 2:2838892/1‑91 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:3210012/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:3451782/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:2217433/91‑1 (MQ=255) gATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgt > 2:2613431/1‑91 (MQ=255) gATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgt > 1:672238/1‑91 (MQ=255) aTAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgtg > 2:2661554/1‑91 (MQ=255) aTAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgtg > 1:1895284/1‑91 (MQ=255) tAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCGAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGc < 2:1672736/91‑1 (MQ=255) aaTCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCg < 2:843516/91‑1 (MQ=255) aaTCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAATAAGGAGTTGATGCGATGTGCg < 2:210199/91‑1 (MQ=255) cATATTTTTTTTTTTTGTTTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTaa > 2:622295/1‑91 (MQ=255) cATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTCAGGAGTTGATGCGATGTGCGTaa > 1:993182/1‑91 (MQ=255) cATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTaa < 2:2516846/91‑1 (MQ=255) atatTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAAt < 1:2587821/91‑1 (MQ=255) atatTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAAt < 1:1745479/91‑1 (MQ=255) atatTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAAt < 1:1078008/91‑1 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAATAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 2:365910/1‑91 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 1:3337468/1‑91 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 1:198680/1‑91 (MQ=255) ttttttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGa < 1:104168/91‑1 (MQ=255) ttttttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGa < 2:3054976/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCCTTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 2:3548675/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa > 2:1604286/1‑91 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 1:2621348/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 1:3572589/91‑1 (MQ=255) tGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaa < 2:349757/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 2:1724388/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 2:924876/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 1:3942513/91‑1 (MQ=255) tgtAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGa < 2:68131/91‑1 (MQ=255) tAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAAt > 1:412830/1‑91 (MQ=255) tAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAAt < 1:1989147/91‑1 (MQ=255) aGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAGGGAGTTGATGCGATGTGCGTAATCGATTGAAAGCAtt < 2:1264023/91‑1 (MQ=255) gATTTGACAAGTATAGTTGTCATTAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTa > 2:638190/1‑91 (MQ=255) tGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAg > 1:3804346/1‑91 (MQ=255) tGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATCGAAAGAATTACGAg < 1:1696823/91‑1 (MQ=255) gACAACTATATTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGc > 1:873468/1‑91 (MQ=255) aCAACTATATTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCa > 1:2420090/1‑91 (MQ=255) aaaTATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACg < 1:845469/91‑1 (MQ=255) aaaTATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACg > 1:1320179/1‑91 (MQ=255) | TAAACAATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACG > USA300TCH1516_ALE/401309‑401487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |