| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 401,404 | G→T | 9.1% | intergenic (‑189/‑52) | USA300HOU_RS01845 ← / → sutR | hypothetical protein/HTH‑type transcriptional regulator SutR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 401,404 | 0 | G | T | 9.1% | 758.2 / 44.8 | 229 | intergenic (‑189/‑52) | USA300HOU_RS01845/sutR | hypothetical protein/HTH‑type transcriptional regulator SutR |
| Reads supporting (aligned to +/- strand): ref base G (95/112); new base T (15/6); total (111/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.74e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
AATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACGAGATGGC > USA300TCH1516_ALE/401314‑401494 | aaTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAg < 2:3461775/91‑1 (MQ=255) aTTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGt < 2:2375774/91‑1 (MQ=255) ttATGACTTGTAGGCGTTGGGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGtt > 1:865131/1‑91 (MQ=255) ttATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGtt > 1:2927323/1‑91 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGt > 2:2456574/1‑91 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGt > 1:1987214/1‑91 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGt < 1:920012/91‑1 (MQ=255) aTGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATCTGACAAATATAGTTGt > 2:3034037/1‑91 (MQ=255) tGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACTATATTTGTc < 1:1636899/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCGTACATAGTTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 1:2652616/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAACTATATTTGTCa < 1:3172308/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa > 2:2762661/1‑91 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa > 1:3842483/1‑91 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 2:3715035/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa < 2:1503428/91‑1 (MQ=255) gACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCa > 2:2670317/1‑91 (MQ=255) tAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGa < 1:2586321/91‑1 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc < 2:2022122/91‑1 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc > 2:2190129/1‑91 (MQ=255) aGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGAc > 1:3072487/1‑91 (MQ=255) gCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGc > 1:3893751/1‑91 (MQ=255) tGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCatat > 1:3541085/1‑91 (MQ=255) gAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGTTTTATTTTTGACAAATATAGTTGTCAAAAAGACGCATATc > 2:3815143/1‑91 (MQ=255) gAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATc > 1:1317199/1‑91 (MQ=255) gtgtTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCAtt < 2:405684/91‑1 (MQ=255) gtttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTa > 1:1304457/1‑91 (MQ=255) tttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTAc > 1:3837487/1‑91 (MQ=255) tttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTAc > 2:2952805/1‑91 (MQ=255) tttgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTAc > 1:3007906/1‑91 (MQ=255) tttgtgtCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTAc < 2:3202087/91‑1 (MQ=255) tgtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAg < 2:2083590/91‑1 (MQ=255) tgtttCAAAATGTCATACATAGGTGGATAATCATATTTATTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAg < 2:1702914/91‑1 (MQ=255) gtttCAAGATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 1:1983111/91‑1 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt > 1:1013343/1‑91 (MQ=255) gtttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgt < 2:2962274/91‑1 (MQ=255) ttCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAgtgt < 1:1955501/91‑1 (MQ=255) tCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTa > 1:1427609/1‑91 (MQ=255) aaaTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAtt > 1:836250/1‑91 (MQ=255) aaTGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTa < 1:2285124/91‑1 (MQ=255) catacataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAg > 2:2886958/1‑91 (MQ=255) atacataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGt > 1:492980/1‑91 (MQ=255) tacataGGTGGATCATCATATTTTTTGGTGTAGATTTGACACATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGtt > 2:1296721/1‑91 (MQ=255) acataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTg < 2:3879978/91‑1 (MQ=255) acataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTg < 2:452781/91‑1 (MQ=255) cataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGa > 2:2745124/1‑91 (MQ=255) ataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGAt < 2:2339104/91‑1 (MQ=255) ataGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGAt < 2:3131425/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:2217433/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:3451782/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 2:3210012/91‑1 (MQ=255) ggATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg > 2:2907439/1‑91 (MQ=255) ggAGAATCATATTTTTTGGTGTAGAGTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtg < 1:388568/91‑1 (MQ=255) gATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgt > 2:2613431/1‑91 (MQ=255) gATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgt > 1:672238/1‑91 (MQ=255) aTAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGAtgtg > 1:1895318/1‑91 (MQ=255) aaTCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCg < 2:843516/91‑1 (MQ=255) aaTCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCg < 1:1358387/91‑1 (MQ=255) aaTCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAAATAAGGAGTTGATGCGATGTGCg < 2:210199/91‑1 (MQ=255) cATATTTTTTTTTTTTGTTTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTaa > 2:622295/1‑91 (MQ=255) cATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTCAGGAGTTGATGCGATGTGCGTaa > 1:993182/1‑91 (MQ=255) cATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTaa < 2:2516846/91‑1 (MQ=255) cATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTaa > 1:1273062/1‑91 (MQ=255) atatTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAAt < 1:1077961/91‑1 (MQ=255) atatTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAAt < 1:1745479/91‑1 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAATAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 2:365910/1‑91 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 1:3337468/1‑91 (MQ=255) atTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCg > 1:3500558/1‑91 (MQ=255) ttttttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGa < 1:104168/91‑1 (MQ=255) ttttttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGa < 2:2140423/91‑1 (MQ=255) tttttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGAt > 2:678236/1‑91 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCATAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa > 2:1604739/1‑91 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCCTTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 2:3548675/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 1:3572589/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 1:2621335/91‑1 (MQ=255) ttGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGa < 1:2071893/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 2:924876/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 2:1724388/91‑1 (MQ=255) ggTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGaaa < 1:3942497/91‑1 (MQ=255) gtgtAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAg < 1:1468437/91‑1 (MQ=255) gtAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGaa > 1:2893907/1‑91 (MQ=255) tAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAAt > 1:412830/1‑91 (MQ=255) aGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAGGGAGTTGATGCGATGTGCGTAATCGATTGAAAGCAtt < 2:1264023/91‑1 (MQ=255) aGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAAtt < 1:3796376/91‑1 (MQ=255) gATTTGACAAGTATAGTTGTCATTAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTa > 2:638190/1‑91 (MQ=255) tttGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACg < 1:2011222/91‑1 (MQ=255) tGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAg > 1:2765063/1‑91 (MQ=255) tGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATCGAAAGAATTACGAg < 1:1696823/91‑1 (MQ=255) aCAACTATATTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCa > 2:3003638/1‑91 (MQ=255) aCAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCa < 2:1133451/91‑1 (MQ=255) caactataTTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTAAAAGAATTACGAGCAc > 2:3781671/5‑91 (MQ=255) cAAATATAGTTGTCAAAAAGACGAATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCAc > 2:3577856/1‑91 (MQ=255) aactataTTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACg > 2:1524674/4‑91 (MQ=255) aaaTATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACg < 1:845469/91‑1 (MQ=255) ctataTTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACgag > 2:82770/2‑91 (MQ=255) tataTTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACgaga > 2:235663/1‑91 (MQ=255) tataGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACgaga < 1:2797785/91‑1 (MQ=255) tataGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACgaga < 2:3428574/91‑1 (MQ=255) taGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACGAGATg < 1:989503/91‑1 (MQ=255) taGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACGAGATg < 1:1169005/91‑1 (MQ=255) gTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGATGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACGAGAAgga > 2:1377387/1‑90 (MQ=255) | AATTATGACTTGTAGGCGTTGAGGTGTTTGTTTCAAAATGTCATACATAGGTGGATAATCATATTTTTTGGTGTAGATTTGACAAATATAGTTGTCAAAAAGACGCATATCATTTACAGTGTAATTAAGGAGTTGATGCGATGTGCGTAATCGATTGAAAGAATTACGAGCACGAGATGGC > USA300TCH1516_ALE/401314‑401494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |