| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 583,948 | A→T | 5.7% | intergenic (+32/‑240) | rplA → / → rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 583,948 | 0 | A | T | 5.7% | 651.0 / 19.3 | 194 | intergenic (+32/‑240) | rplA/rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Reads supporting (aligned to +/- strand): ref base A (90/93); new base T (8/3); total (98/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
Only 100 of 223 total aligned reads displayed.
TTGCTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGT > USA300TCH1516_ALE/583858‑584038 | cggtGTAACTACAATAATGGGTCCTGGAGTTCACATTGATTGCTCGAGTTTCAAGTAATAACTGATATATACCGTCACCGGCTgcgagaac < 2:2440146/88‑2 (MQ=255) gTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATc < 1:708829/91‑1 (MQ=255) gTAACTACAACAATGCGGCCTGGAGTTAAAATTGATACTTCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATc < 2:1645957/91‑1 (MQ=255) aaCTACAACAATGGGTCCTGGAGTTAAGATTGATACTGCGAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCtt > 1:264223/1‑91 (MQ=255) cTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTc < 1:2164589/91‑1 (MQ=255) cTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATAtttctttc < 1:2713084/91‑1 (MQ=39) acaacaATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATACTAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAg > 1:3952430/1‑91 (MQ=255) acaacaATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAg > 2:1495934/1‑91 (MQ=255) caacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGt < 1:2982842/91‑1 (MQ=255) caacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGt > 2:2770020/1‑91 (MQ=255) aacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTc < 2:738573/91‑1 (MQ=255) aacaaTGGGTCCTGGAGTTAAAATTGATACTACAAGTTTCAAATTATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTc < 2:3546826/91‑1 (MQ=255) aaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGt < 1:2016564/91‑1 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaa > 2:1296529/1‑91 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa > 1:1704131/1‑91 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa > 1:3021174/1‑91 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa > 2:1557348/1‑91 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa > 2:886863/1‑91 (MQ=255) ggTCCTGGAGTTAAAATTAATACTGAAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaa < 1:1821451/91‑1 (MQ=255) ggTCCTGGAGTTAAAAGTGATACTGCAAGTTTCAAATAATAAATGAGATAAACAATTACAGGCTGAAAGAAATATCTTACAGTCTGTaaaa < 2:2650127/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa < 1:1835397/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa < 2:2973085/91‑1 (MQ=255) cTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatat < 1:732481/91‑1 (MQ=255) cTGGAGTTAAAATAGATACTGCAAGTTTCAAATAATAAAAGATATAAACAATTACAGGCTGAAAGAAATATCTTAAAGTCTATAAAAatat < 2:3711398/91‑1 (MQ=255) tGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatata > 2:926412/1‑91 (MQ=255) ggAGTTATAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat < 2:1999033/91‑1 (MQ=255) ggAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat > 1:3825647/1‑91 (MQ=255) ggAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat < 2:2838341/91‑1 (MQ=255) gAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATAtt > 1:35902/1‑91 (MQ=255) gTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGa > 2:3859120/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa < 2:841490/91‑1 (MQ=255) tGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGt < 1:2471329/91‑1 (MQ=255) tGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGt < 1:3708493/91‑1 (MQ=255) gATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTa > 2:709218/1‑91 (MQ=255) gATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTa > 1:2730652/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 1:2205695/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 2:2154375/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 2:564397/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 1:1345463/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 1:1624563/1‑91 (MQ=255) tACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAt < 2:3327090/91‑1 (MQ=255) aCTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAtt > 1:3806098/1‑91 (MQ=255) aCTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAtt > 2:1245235/1‑91 (MQ=255) cTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAttt > 2:485855/1‑91 (MQ=255) gCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTcc > 2:3365256/1‑91 (MQ=255) aaGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCaa < 1:2077491/91‑1 (MQ=255) aGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAg < 1:232180/91‑1 (MQ=255) aGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAg < 2:1221400/91‑1 (MQ=255) gTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGt < 2:2053063/91‑1 (MQ=255) ttCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATAGCTTTCAGTCTGTAAAAAGATATTGACAATAAGTAATTTCCAAGTta < 2:2294369/91‑1 (MQ=255) cAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtata < 1:147006/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat < 1:998032/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat < 1:1088531/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat < 1:907972/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat < 1:1922583/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat > 2:2222934/1‑91 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt > 1:878961/1‑91 (MQ=255) aaaTGATATAAACAATTACAGGCTGAAAGAAATATCATTCAGTCTGTGAAAATATATTGACAATAATCAATTTCCACGTTATATTACTTAt > 2:3673738/1‑91 (MQ=255) aaTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTAtt > 1:128644/1‑91 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg < 2:1139872/91‑1 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg > 1:536753/1‑91 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg < 2:1827330/91‑1 (MQ=255) tataAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGat > 1:929757/1‑91 (MQ=255) tataAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGat > 2:1581310/1‑91 (MQ=255) ataAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGatt > 1:2327646/1‑91 (MQ=255) ataAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGatt < 2:199718/91‑1 (MQ=255) aCAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTAttt < 1:2406866/91‑1 (MQ=255) aCAATTACAGGCGGAAAGAAATATCTTTCAGGCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTAttt < 2:711140/91‑1 (MQ=255) aaTTACAGGCTGACAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCACGTTATATTACTTATTGTGATTCTTTTa > 2:2900372/1‑91 (MQ=255) aaTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTa < 1:3490408/91‑1 (MQ=255) aTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc < 1:2562247/91‑1 (MQ=255) aTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 2:2589932/1‑91 (MQ=255) tACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCt < 1:1417873/91‑1 (MQ=255) tACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCt > 1:2522618/1‑91 (MQ=255) tACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCt < 1:530248/91‑1 (MQ=255) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 1:2000610/1‑91 (MQ=255) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa < 2:2266468/91‑1 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa > 2:2811419/1‑91 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa < 2:140318/91‑1 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 1:2444600/1‑91 (MQ=255) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:648656/3‑91 (MQ=38) cTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACa < 1:1178631/91‑1 (MQ=255) cTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACa < 2:3178985/91‑1 (MQ=255) cTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACa > 1:1372571/1‑91 (MQ=255) tGAGAGAAATATCTTTTAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAg < 1:3182818/91‑1 (MQ=255) tGAAAGATATTTCTTTCAGCCTGTAACAATATATTGACAATAAGTCATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAg > 2:2853953/1‑91 (MQ=38) tGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAg > 1:1192963/1‑91 (MQ=38) tGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAg < 1:489718/91‑1 (MQ=255) gaaagataTTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGt > 1:2778896/1‑91 (MQ=39) gaaagaaaTATCTCTCAGTCTGTAAAAATATATTGACAATAAGGAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGt < 1:3955634/91‑1 (MQ=255) aaagaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGGGATTGCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTa < 2:3810919/91‑1 (MQ=255) aagataTTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAg > 2:307708/1‑91 (MQ=255) aagaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAg < 2:2430917/91‑1 (MQ=255) gaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGa < 1:3646452/91‑1 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGCTTATTTTACCTAAGAACGTAGGAGt > 2:2736657/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:2282273/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt < 1:3380290/91‑1 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 2:234722/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt < 1:1143643/91‑1 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTACTTATTTTACCTAAGACAGTCGGAGt > 2:3422778/1‑91 (MQ=255) | TTGCTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGT > USA300TCH1516_ALE/583858‑584038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |