| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 770,883 | T→C | 7.5% | intergenic (+69/‑181) | ybaK → / → glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 770,883 | 0 | T | C | 7.5% | 644.9 / 31.5 | 202 | intergenic (+69/‑181) | ybaK/glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Reads supporting (aligned to +/- strand): ref base T (105/81); new base C (4/11); total (110/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.18e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
TGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAATTTTAT > USA300TCH1516_ALE/770793‑770973 | tGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt > 1:3276541/1‑91 (MQ=255)tGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt < 2:296291/91‑1 (MQ=255)tGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt > 1:1943071/1‑91 (MQ=255)aggAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt < 2:2361419/90‑1 (MQ=255) gAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTc > 2:54323/1‑91 (MQ=255) aGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCt > 1:544407/1‑91 (MQ=255) aGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCt < 1:3631791/91‑1 (MQ=255) gCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTg > 2:1851005/1‑91 (MQ=255) gCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTg > 2:3033289/1‑91 (MQ=255) cAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTgt < 1:3587273/91‑2 (MQ=17) tttATCCATGAGTTAGTAATAACAACAAAAAGTATTGGGCAAGGTTAGGAGTGTGACAGAAATGAATTTTATAAAAATTTCATCTCTGTca < 2:1631853/90‑1 (MQ=9) gTTATCCATGGATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTgtca < 2:2633975/91‑4 (MQ=17) gTTATCCATGAATGATTAATAACACCAAAACGTCGGGGGGACGATTAGGAGCGTGACAGACATGAAATTTTTCTAAAGTCCAATTCTGCca > 2:2381751/1‑91 (MQ=255) gTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCca > 2:2378319/1‑91 (MQ=255) gTTATCCATGAATGATTAAAAAAAAAAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCca < 2:3693871/91‑1 (MQ=255) ttATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcac < 1:1076918/91‑1 (MQ=17) ttATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcac < 1:3813290/91‑1 (MQ=255) ttATCCATGAATGACTAATAACAGAAAAAAGTATGGGGCAAGAGTAGGAGTGTGTCAGAGATGAAATTTTTATAAAATTCATTGCTGCcac < 2:3675936/91‑1 (MQ=255) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcaca < 2:3738775/91‑1 (MQ=17) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcaca < 2:3133026/91‑1 (MQ=255) agccATGAATGATTAATAACAACAAAAAGAATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCacac < 2:3628458/89‑1 (MQ=9) aTCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCacac > 1:644699/1‑91 (MQ=255) tCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACt < 2:275782/91‑1 (MQ=255) tCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACt < 2:1259754/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCTACACTc > 1:2400741/1‑91 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 1:3533149/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 2:2867210/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 2:3488643/91‑1 (MQ=255) cATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTcc < 1:3648154/91‑1 (MQ=255) cATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTcc > 1:2340554/1‑91 (MQ=255) tgtatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGGGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtt < 2:484326/88‑1 (MQ=255) gaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGAGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttt < 1:3135355/91‑1 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt > 2:581727/1‑91 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt < 1:613139/91‑1 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt < 2:327287/91‑1 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt < 2:1725190/91‑1 (MQ=255) atgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttttt < 1:2518447/91‑1 (MQ=255) taataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattg > 1:2721731/1‑91 (MQ=255) taataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattg > 1:2721705/1‑91 (MQ=255) aataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattga < 2:1893630/91‑1 (MQ=255) ataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGaa > 1:722449/1‑91 (MQ=255) acaacaAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTa > 2:2486191/1‑91 (MQ=255) aacaaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGc < 2:1972726/91‑1 (MQ=255) acaaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCa > 1:1256131/1‑91 (MQ=255) caaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAt < 1:1317215/91‑1 (MQ=255) caaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAt > 1:1824744/1‑91 (MQ=255) aaaaaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAtt > 1:421088/1‑91 (MQ=255) accaGTATGGGGCAAGATTAGGAGTCTGACAGAGATGAAATTTTTATAACATTCATTTCTGCAACACTCCCTTTTGATTGCATTATCAttt > 2:1023494/4‑91 (MQ=255) aaaaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAttt < 2:1096286/91‑1 (MQ=255) aaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTa < 1:2450082/91‑1 (MQ=255) aaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTa > 2:2326445/1‑91 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc > 1:2764868/1‑91 (MQ=255) tGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATc > 1:256968/1‑91 (MQ=255) tGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATc > 1:3212691/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa < 1:2711333/91‑1 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa < 2:2107356/91‑1 (MQ=255) gggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCAt > 2:742524/1‑91 (MQ=255) ggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATa > 2:2536479/1‑91 (MQ=255) gCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaa > 2:663760/1‑91 (MQ=255) gCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaa > 2:2014918/1‑91 (MQ=255) cAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaaa < 1:2891777/91‑1 (MQ=255) aaGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAAc > 1:3096859/1‑91 (MQ=255) aGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACa < 2:3068357/91‑1 (MQ=255) aTTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGt > 1:1112409/1‑91 (MQ=255) ttAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTc < 2:1539059/91‑1 (MQ=255) ttAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCGTTTTGATTGAATTAGCATTTTACGATCATAAACAGTc < 1:346640/91‑1 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt > 1:3241729/1‑91 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTGGCATTTTACGATCATAAACAGTCAtt < 2:2240707/91‑1 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAtt < 1:2022146/91‑1 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACCCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAtt > 1:1635303/1‑91 (MQ=255) aGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATtat > 1:682169/1‑91 (MQ=255) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt < 1:2589346/91‑1 (MQ=255) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt > 1:876459/1‑91 (MQ=255) tgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCTCACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAtt > 1:3318339/1‑91 (MQ=255) gACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTg < 1:2358012/91‑1 (MQ=255) gcAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGa > 1:1860126/2‑91 (MQ=17) aCAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGa > 1:1338816/1‑91 (MQ=255) cAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAg > 1:5295/1‑91 (MQ=18) agagATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGTTTGTATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGt > 2:1712145/1‑91 (MQ=255) agaaATGAATTTTATAAAAATTTCATATCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGt > 2:3655346/1‑91 (MQ=21) gagaTGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTa > 1:1644313/1‑91 (MQ=255) agaTGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTAt > 2:1914428/1‑91 (MQ=255) tGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTg < 1:3779243/91‑1 (MQ=255) tGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTg > 1:1567629/1‑91 (MQ=255) gAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGa > 1:2525411/1‑91 (MQ=255) gAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGa > 1:1283089/1‑91 (MQ=255) aaaTTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGaa < 1:1664147/91‑1 (MQ=255) ttATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATaaa < 2:3897757/91‑1 (MQ=255) aaaaTTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATg > 2:1295926/1‑91 (MQ=255) aaaaTTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATg < 1:1975189/91‑1 (MQ=255) aaaTTCATTTCTGCCACACTCCTTTTTGTTTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTCTTTGAACATAAACATGt > 2:2623081/1‑91 (MQ=255) aaaTTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGt < 1:14159/91‑1 (MQ=255) aaaTTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGt < 1:3866788/91‑1 (MQ=255) aaaTTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGt > 2:1680732/1‑91 (MQ=255) ttCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAAt > 2:2153832/1‑91 (MQ=255) cATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAAttt > 2:3214124/1‑91 (MQ=255) cATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAAttt > 1:2097794/1‑91 (MQ=255) aTTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAAtttt > 1:841860/1‑91 (MQ=255) tttCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAATTTTa > 1:3826614/1‑91 (MQ=255) ttCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAATTTTAt > 1:1553442/1‑91 (MQ=255) | TGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATTTGAACATAAAAATGTAATTTTAT > USA300TCH1516_ALE/770793‑770973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |