| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2740979 | 194 (0.920) | 34 (0.190) | 17/152 | 11.3 | 16.7% | intergenic (+21/+60) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase |
| ? | USA300TCH1516_ALE | = 2741001 | 177 (1.000) | intergenic (+43/+38) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2740876‑2740979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaatcatttccACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGTC < USA300TCH1516_ALE/2741001‑2740912 TTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAA > 1:2429094/1‑91TTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAA > 2:1790818/1‑91 GTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAA > 2:973370/1‑91 GTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAA < 1:1487940/91‑1 GTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAA < 1:1488282/91‑1 GTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAA > 2:2403130/1‑91 TTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAA > 1:1347374/1‑91 TTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAA > 2:1319015/1‑91 TTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAA > 2:592948/1‑91 TTGGTATCAGCCTATAATTAAGTTATGGACTTAGAAATTCTAAGAAAAATGACGTAGCTGAATACCACCCACAAAAATAAAAAAT‑AAAAAA < 2:3203011/91‑1 TGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAA > 2:3042683/1‑91 GGTATCATCCTATATTTAAGTTATGGACTTAGCCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAA > 2:3565885/1‑91 GGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAA > 2:3563056/1‑91 GGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAA > 2:3324430/1‑91 GGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAA > 2:1094894/1‑91 GGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAAAAAAATGACGTAGCTGAATACCACCAAAAAAAAAAAAAAAT‑AAAAAAAA < 2:2839055/91‑1 GTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAAT < 2:551019/91‑1 TATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATC > 1:1271570/1‑91 ATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCA > 2:714858/1‑91 TCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCAT < 1:2860532/91‑1 TCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCAT < 2:748831/91‑1 ATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTT > 1:2679239/1‑91 ATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTT < 1:3298625/91‑1 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAAATCATTT > 1:665235/1‑91 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC > 2:3120993/1‑91 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC > 2:506962/1‑91 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC < 1:1851896/91‑1 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC < 1:1851576/91‑1 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC > 2:1415703/1‑91 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC > 1:665486/1‑91 TCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTC < 1:529761/91‑1 GTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAAGCATTTCC‑CATCTGGATGT < 1:2055412/91‑1 ATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTA < 1:1475072/91‑1 TGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAA < 1:2251140/91‑1 TGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAA < 2:456109/91‑1 GACTTAGACATACCAAGAAAAAAGACGTAGCTGAATACCCCCCACCAAAAAAAAAAAA‑AAAAAAAATCATTTCCACATCTGGATGTTAATC < 2:770724/91‑1 CTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGAT < 1:1296491/91‑1 CTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGAT < 1:1913523/91‑1 CTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGAT < 1:1913645/91‑1 TTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATG < 1:3076265/91‑1 AGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGG < 1:239062/91‑1 AGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGG < 1:239446/91‑1 AGACATTCTAAGAAAAATGACGTAGATGAATGCCAAACAAAAAAAAAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATG < 2:2700931/91‑1 aACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGG < 2:2751258/90‑1 GACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGG < 1:2686392/91‑1 actTTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGG < 1:2855043/88‑1 ATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAA < 1:1472131/91‑1 ttgTAAGAAAAATGACGTAGCTGAATACCACCCAGAAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAA < 2:1067254/88‑1 TTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAA < 2:532695/91‑1 aCTAAAAAAAATGACGTAGCTGAATACCACCCACCATAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAAT < 2:3580936/90‑1 TCTAAGAAAAATGACGTGGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAAT < 1:3111577/91‑1 aAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTT < 2:1648375/90‑1 GAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTT < 2:491259/91‑1 GAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTT < 2:1648387/91‑1 AAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTT < 1:3524204/91‑1 AAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTT < 2:661709/91‑1 AAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTT < 2:3452923/91‑1 AATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTT < 1:1950973/91‑1 ATGAGGTAGCTGAATACCACCCACCAAAAGAAAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTAT < 2:1620982/91‑1 CGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTT < 1:2858709/91‑1 CGTAGCTGAATACCACCCACCAAAATATAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTT < 1:2858844/91‑1 CGTAGCTGAATACCACCCACCAAAATAAAAAAT‑‑‑AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTT < 2:1396504/91‑1 GTAGCGGAATACCACCCACCAAAATATAAA‑‑‑AGAAAAAATCAGTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTg < 2:682437/91‑2 TAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTT < 1:412464/91‑1 CCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGT < 1:2945878/91‑1 AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTT < 1:2352775/91‑1 AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTT > 2:127781/1‑91 AAAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTT < 2:298333/91‑1 AAAAAATCATTTCCACATCTGGATGTTAATAAGATGGGAAATGATTTTTTTTATTTTTTATTTTGATGTGTGTTATTCATCTACGTTATTT > 2:127935/1‑91 AAAAAAGCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTGTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTT < 2:1206156/91‑1 AAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTT > 1:3575337/1‑91 AAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTT < 2:1306040/91‑1 AAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTT > 2:59193/1‑91 AAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTT < 1:72154/91‑1 AAAAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTT > 1:74632/1‑91 AAATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTGTTTATGTTTTATTGTGGTGGGTGGTATTCAGCTACGTCATTTTTC < 2:688023/91‑1 AATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCT > 1:1834055/1‑91 AATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCT > 1:2353890/1‑91 AATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCT > 2:1747220/1‑91 AATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCT < 2:3574423/91‑1 ATCATTTCCACATCTGGATGTTAATCAGATGGGGAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 1:2973049/91‑1 ATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 2:3115354/91‑1 ATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT > 2:1829166/1‑91 ATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 1:3157690/91‑1 ATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 2:3116026/91‑1 ATCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 2:3115346/91‑1 ATCATGTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTT < 2:2942047/91‑1 TCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTA > 1:1606317/1‑91 TCATTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTA > 1:387661/1‑91 TTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAA > 2:489207/1‑91 TTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAA > 2:2449838/1‑91 TTTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAA > 1:1924156/1‑91 TTCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAAT > 1:3042683/1‑91 TCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATG > 1:2120650/1‑91 TCCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATG > 1:2120716/1‑91 CCACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGT < 2:1645650/91‑1 CACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGTC < 2:1078483/91‑1 CACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGTC > 2:1525207/1‑91 CACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGTC < 2:417177/91‑1 TTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2740876‑2740979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaatcatttccACATCTGGATGTTAATCAGATGGGAAATGATTTTTTTTATTTTTTATTTTGGTGGGTGGTATTCAGCTACGTCATTTTTCTTAGAATGTC < USA300TCH1516_ALE/2741001‑2740912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |