Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP000731 6,552 +TCTCCAGGCACTTGTGCATATTCTGAAA 100% intergenic (+1069/‑419) cadX → / → USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 65520 (0.000)82 (0.940)
+TCTCCAGGCACTTGTGCATATTCTGAAA
53/202 NT 100% intergenic (+1069/‑419) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator
?CP000731 6553 = 0 (0.000)intergenic (+1070/‑418) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

Only 100 of 137 total aligned reads displayed.

CACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6414‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC  >  CP000731/6553‑6691
                                                                                                                                            ||||||||||||||||||||||||||||                                                                                                                                           
 ACTAAAATTTCAGGTTGTGATTTGATATTCATTCCCTATTATTCTAGTTCAAAAATTGATAATGCTGCCGTCAAACCGCCTGTGCCATATACCATAGCCTCTTTAATAGACATTGCTTGGGTGATACGAACAATCCCCTC                                                                                                                                                                       >  2:132517/1‑140
  CTAAAATTTCAGGTTGTGATGTGATATTCATTCCATATTTTTCTGGTTCAAAAATTGAAAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATCGACATTTATTGGGGAATACGAACAATCCACTCT                                                                                                                                                                      >  1:194156/1‑140
   TAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTC                                                                                                                                                                     <  1:133647/140‑1
   TAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCCGTGCCATATACCATAGACTCCTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCcc                                                                                                                                                                     >  2:12037/1‑138
   TAAAATTTCAGGTTGTGATTCAATATACATGCCAATTTTTTTTGATGACAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTC                                                                                                                                                                     <  1:150908/140‑1
    AAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAGTAGGAACAATCCACTCTCC                                                                                                                                                                    >  1:285446/1‑140
       atgTCAGGTTGTGATTTGATACTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGG                                                                                                                                                                 <  1:10202/137‑1
       ATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGG                                                                                                                                                                 <  1:307679/140‑1
        TTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGC                                                                                                                                                                >  1:298862/1‑140
                TGTGATTTGATCTTCCTTCCATATAATACAAAAAAAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGC                                                                                                                                                        <  2:252984/140‑1
                 tTGATTCGATATTCATTCCACATTCTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCA                                                                                                                                                       <  2:91399/139‑1
                 GTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCA                                                                                                                                                       <  2:109837/140‑1
                  TGATTTGATATTCATTCCATATTTTCCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGATTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCGCTCTCCAGGCACTTGTGCAT                                                                                                                                                      <  1:195448/140‑1
                    ATTTGATATTCATTCCATATTTTTCTAGTTAAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATATACATTTCTTTGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATAT                                                                                                                                                    >  2:164469/1‑140
                        tATATTCGTTCCATATTTTGCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCCGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                <  2:145311/139‑1
                        GATTTTCATTCCTATTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAACCCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                <  2:240928/140‑1
                        GATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                <  1:273085/140‑1
                        GATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACAATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                >  2:141089/1‑140
                          TATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTATGCATATTCTGAA                                                                                                                                              >  2:135829/1‑140
                          TATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGAAGATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAA                                                                                                                                              >  1:166485/1‑140
                           ATTCATTCCACATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAA                                                                                                                                             <  1:108367/140‑1
                            TTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGCCTCTTTAATAGACATTTCTTGGGGAATAGGAACAACCCACTCTCCAGGCACTTGTGCATATTCTGAAAA                                                                                                                                            <  2:155023/140‑1
                            TTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAA                                                                                                                                            <  2:100117/140‑1
                                 TCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTCTGCATATTCTGAAAATCCAC                                                                                                                                       >  2:292769/1‑140
                                  CCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCCTAGACTCTTTAATAGACATTTCTTGGGGCATAGGAACAATCCACTCTCCAGGCACTTGTGCATATGCTGAAAAGCCACa                                                                                                                                      >  1:54815/1‑139
                                  CCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTAAATAGACATTTCTTGGGGAATAGGAACAATCCACTTTCCAGGCACTTGTGCATATTCTGAAAATCCACC                                                                                                                                      >  2:90190/1‑140
                                    ATATTTATCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTTTGAAAATCCACCTG                                                                                                                                    <  1:317521/140‑1
                                       TTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATTTTCTGAAAAGTCACCTGTAT                                                                                                                                 >  1:40983/1‑140
                                       TTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAT                                                                                                                                 >  2:114595/1‑140
                                         TTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATTCACCAGAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGT                                                                                                                               <  1:312977/140‑1
                                         TTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGT                                                                                                                               >  1:272438/1‑140
                                            CTAGTTCAAAAATTGATGATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGCCTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTC                                                                                                                            <  1:26130/140‑1
                                            CTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTC                                                                                                                            >  1:74540/1‑140
                                               GTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAAGAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACG                                                                                                                         <  1:122971/140‑1
                                                  CAAAAATTGATAATGCTGAAGTAAAACCGGCTGTGCCATATACCATAGACGCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATACACCTGTATGTGTCACGCCA                                                                                                                      >  2:187046/1‑140
                                                   AAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCca                                                                                                                     >  1:92138/1‑138
                                                       acTTGATAATGCTGTTGTATAACTGGTTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACAT                                                                                                                  <  1:240801/138‑1
                                                          TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCAT                                                                                                               >  1:225494/1‑140
                                                            ATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAA                                                                                                             >  2:286845/1‑140
                                                            ATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCAACCTGTATGTGTCACGCCAACATCATAA                                                                                                             >  2:138646/1‑140
                                                             TAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAGCATAATCAC                                                                                                            >  1:115244/1‑140
                                                             TAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAAC                                                                                                            >  1:126019/1‑140
                                                              AATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCACCATCATAACC                                                                                                           >  1:14203/1‑140
                                                                TGCTGCCGTAAAACCGGCTGTGCCATATACCATGGACTCTTTAATAGACATTCCTTGGGGAATAGGAACAATCCACCCTCCAGGCACCTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAG                                                                                                         <  1:34741/140‑1
                                                                    GCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAAC                                                                                                     <  1:205299/140‑1
                                                                      CGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTA                                                                                                   >  2:286988/1‑140
                                                                       GTAAACCCGGCGTTGCCATGTCGCATAGACGCTTTAATAGAGATTTCTTGGGGAATAGGAAGTATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCCCGCCAACATCATAACCAGTAACTAA                                                                                                  <  2:56692/140‑1
                                                                         AAAACCGGCTGTGCCATATACCATAGTCTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATA                                                                                                <  2:213334/140‑1
                                                                          AAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACAAGTAACAAATAC                                                                                               >  1:102851/1‑140
                                                                              CGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCGCGCCAACATCATAACCAGTAACTAATACATTA                                                                                           >  1:36487/1‑140
                                                                              CGGCTGTGCCATATACCATAGACTCTTTAAGAGACATCTCTTGGGGACAAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACCCCCACATCATAACTCGAGACTCATACATca                                                                                           >  2:131139/1‑138
                                                                                                TAGTCTCTCTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTA                                                                         <  1:279079/140‑1
                                                                                                   ACTCTTTAATAGACATTTATAGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATAGCCTTCTTTAAACTAATaa                                                                      >  2:258246/1‑138
                                                                                                     TCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATT                                                                    >  1:147088/1‑140
                                                                                                       TTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCG                                                                  <  2:74540/140‑1
                                                                                                        TTAATCGCCCTTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                                 <  1:131927/140‑1
                                                                                                        TTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                                 <  1:155803/140‑1
                                                                                                        TTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                                 <  2:55952/140‑1
                                                                                                          aagAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACAGTATCGCCTTCTTTAAACTTATCATTCGAAC                                                               <  1:132517/137‑1
                                                                                                          AATAGACAGTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGAGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAAC                                                               <  2:194156/140‑1
                                                                                                           attGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                              <  1:167891/137‑1
                                                                                                           accGACTTTTCTTGGGGAATAGGAACAATCCACTCTCCAGTCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                              <  2:215755/137‑1
                                                                                                               ACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGAT                                                          <  1:114617/140‑1
                                                                                                                    TCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAC                                                     >  1:832/1‑140
                                                                                                                    TCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAACACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAC                                                     <  1:141089/140‑1
                                                                                                                      gTGGGTAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATCCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGACCTTGATTCAACAA                                                   <  2:42919/139‑1
                                                                                                                      TTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAA                                                   >  2:228117/1‑140
                                                                                                                          GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACC                                               >  2:35971/1‑140
                                                                                                                          GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTAAACAATACC                                               >  2:162832/1‑140
                                                                                                                          GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCGGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGTTTCAACAGTACC                                               >  2:160196/1‑140
                                                                                                                           GAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTAATCACTCGAACTTAATTCAACAATACCa                                              >  2:8101/1‑139
                                                                                                                            AATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAACTG                                             >  2:182541/1‑140
                                                                                                                                 GAACAATTCAGTCTCCAGGCACTTGTGCATATTCTGAGAATCCTCCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCACCTTCTTTAAACTTATCATTCGAACTTGATTCAACAACACCTGCAAga                                        <  2:176981/140‑3
                                                                                                                                 GAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGTACTTGATTCAACAATACGTGCAAAA                                        >  2:180155/1‑140
                                                                                                                                  AACAATCCTCTCCCCAGGCTCTTGTGCATATTCCTAAAATCCACCTGTATGTTTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTTATTCAACAATACCTGCAAccg                                       <  2:54815/140‑4
                                                                                                                                   ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCACAATC                                      >  1:138287/1‑140
                                                                                                                                   ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATC                                      >  1:171641/1‑140
                                                                                                                                   ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTACAAAATC                                      >  2:182958/1‑140
                                                                                                                                    CAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCT                                     >  1:3294/1‑140
                                                                                                                                      ATCCATTCTCCATGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTAT                                   <  1:90190/140‑1
                                                                                                                                       TCCACTCTCCCGGCACGTGTGCATATTCTGAAAATCCACCTGTATTTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATA                                  <  1:189631/140‑1
                                                                                                                                       TCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATA                                  <  1:244020/140‑1
                                                                                                                                        CCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCACAAATACCTGCAAAATCTATAC                                 >  2:296065/1‑140
                                                                                                                                        CCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAC                                 >  2:101981/1‑140
                                                                                                                                         caaTCTCCAGGAACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACTTGCAAAATCTATAtc                                >  2:246527/4‑138
                                                                                                                                         CACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTCATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACC                                >  2:295397/1‑140
                                                                                                                                          ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACaa                               >  2:130875/1‑138
                                                                                                                                          ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCA                               <  1:290688/140‑1
                                                                                                                                          ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCA                               >  1:296218/1‑140
                                                                                                                                          ACTCTACAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTAGACTTCGAACTCAGTTCACCAATACCTCCTAAATGTAAACCA                               >  2:144684/1‑140
                                                                                                                                           CTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAG                              <  2:85155/140‑1
                                                                                                                                             CTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGA                            >  1:5758/1‑140
                                                                                                                                                       TTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATCCCAGGAATCATAGTAT                  >  1:168575/1‑140
                                                                                                                                                             ATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTC            <  1:286845/140‑1
                                                                                                                                                                TTCTGAAAATCCACCTGTATGTGGCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAA         <  2:154703/140‑1
                                                                                                                                                                  CTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATT       >  2:155273/1‑140
                                                                                                                                                                  CTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCATTCTTTAAACTTATCATTCGAACTAGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATT       <  1:206716/140‑1
                                                                                                                                                                   TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTA      <  2:303120/140‑1
                                                                                                                                                                      AAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACAC   <  1:150082/140‑1
                                                                                                                                                                       AATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC  <  1:135120/140‑1
                                                                                                                                            ||||||||||||||||||||||||||||                                                                                                                                           
CACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6414‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC  >  CP000731/6553‑6691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.