Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	16144	16187	44	2 [1]	[1] 2	USA300HOU_pUSA300HOUMR0019/USA300HOU_pUSA300HOUMR0021	strepthothricin acetyltransferase/IS431 mec transposase

AATTATCTAACTCTTCCAAGGGCAATAAGGTAAGATCAATTTTATTGTAATCATCAAATAGCTATAATAGATTTAGAGGTAAAGAAATTAAATACATTGAAGAGCAGAAAGATTTTACAAAAGAGTATTTTAATAAAAATGAT  >  CP000731/16186‑16328   |                                                                                                                                             aaTTATCTAACTCTTCCAAGGGCAATAAGGTAAGATCAATTTTATTGTAATCATCAAATAGCTATAATAGATTTAGAGGTAAAGAAATTAAATACGTTGAAGGGCAGAGAGATTTTACAAAAGAGTATTTTAATAAAAatg    <  2:66264/141‑1 (MQ=255)   ttATCTAACTCTTCCAAGGGCAATAAGGTAAGATCAATTTTATTGTAATCATCAAATAGCTATAATAGATTTAGAGGTAAAGAAATTAAATACATTGAAGAGCAGAAAGATTTTACAAAAGAGTATTTTAATAAAAatgat  <  4:21043/141‑1 (MQ=255)   |                                                                                                                                             AATTATCTAACTCTTCCAAGGGCAATAAGGTAAGATCAATTTTATTGTAATCATCAAATAGCTATAATAGATTTAGAGGTAAAGAAATTAAATACATTGAAGAGCAGAAAGATTTTACAAAAGAGTATTTTAATAAAAATGAT  >  CP000731/16186‑16328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑