| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 77,975 | Δ1 bp | 7.0% | intergenic (+84/‑343) | USA300HOU_RS00350 → / → USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 77,975 | 0 | G | . | 7.0% | 830.2 / 52.0 | 244 | intergenic (+84/‑343) | USA300HOU_RS00350/USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (118/107); new base . (5/12); total (125/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.06e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 | |||||||||||
Only 100 of 247 total aligned reads displayed.
TAACTAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCA > USA300TCH1516_ALE/77885‑78065 | taACTAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACg < 1:3864884/91‑1 (MQ=255) aaCTAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGa < 2:2938833/91‑1 (MQ=255) aCTAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGAt < 2:251091/91‑1 (MQ=255) tAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAg > 1:1771196/1‑91 (MQ=255) tAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAg < 2:217313/91‑1 (MQ=255) tAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAg > 2:3695386/1‑91 (MQ=255) tAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAg < 1:2416081/91‑1 (MQ=255) aaaCAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAt > 2:668411/1‑91 (MQ=255) aaCAGTATAGTTCCGTGTATTTGACTATAAGAAATTATGAGGATATTAAAGATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAtt < 2:3603223/91‑1 (MQ=255) aCAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAttt < 2:1489254/91‑1 (MQ=255) aCAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAttt > 1:1272250/1‑91 (MQ=255) cAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAtttt > 1:2107966/1‑91 (MQ=255) aGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAttttt > 1:759578/1‑91 (MQ=255) gTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAtttttt > 1:2300456/1‑91 (MQ=255) ataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCa > 2:2281843/1‑91 (MQ=255) aGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATa < 2:3406879/91‑1 (MQ=255) gTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAg < 1:3378065/91‑1 (MQ=21) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 2:3788390/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 1:1752891/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 1:2966255/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATAATAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 2:3484656/91‑1 (MQ=255) tCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCt > 1:3312635/1‑91 (MQ=255) tCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCt > 1:3439076/1‑91 (MQ=255) tCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCt < 2:3186018/91‑1 (MQ=21) ccGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTa > 2:1390731/1‑91 (MQ=255) cGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAt < 1:1719054/91‑1 (MQ=255) cGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTaa < 2:3558103/91‑2 (MQ=18) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTaat < 2:2819344/91‑3 (MQ=18) tgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAttt < 1:3657874/91‑1 (MQ=255) aTTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAtttttt > 1:1183007/1‑91 (MQ=255) tttGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTtta > 1:2280179/1‑91 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 1:2642151/91‑1 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 2:1149553/91‑1 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 1:3757625/91‑1 (MQ=255) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagtta < 2:100541/91‑1 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGCAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat > 2:3475970/1‑91 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat < 2:1944184/91‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata < 1:421007/91‑1 (MQ=255) aaaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagaga > 2:3874447/1‑91 (MQ=255) aaaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagaga > 2:1955472/1‑91 (MQ=255) aaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagagag < 2:1964577/91‑1 (MQ=255) ttATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GTCGGTAGATTTTTTCATAGCTATTTTTTATAGTTATAGAgagga < 2:2518665/91‑1 (MQ=255) aTGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGt > 2:3320720/1‑91 (MQ=255) gAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAg > 1:3395310/1‑91 (MQ=255) gAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAg > 2:3526954/1‑91 (MQ=255) gAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAg > 1:2292555/1‑91 (MQ=255) aGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTTATAGCTATTTTTTATAGTTATAGAGAGGAGTAGa > 2:2678982/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 1:837430/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 2:120217/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 2:833680/1‑91 (MQ=255) atTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTc < 2:751199/91‑1 (MQ=255) ttAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTcc > 1:624948/1‑91 (MQ=255) ttAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTcc > 1:2548717/1‑91 (MQ=255) ttAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTcc > 2:1291217/1‑91 (MQ=255) aaaCATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAg > 2:3571538/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 2:1856627/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 1:2607304/1‑91 (MQ=255) cTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTg > 2:3045412/1‑91 (MQ=255) tAAGATTAGCTTTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTgg < 1:3519033/91‑1 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa < 2:931320/91‑1 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 1:3085584/1‑91 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 2:1367004/1‑91 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 2:2138056/91‑1 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 1:3484368/91‑1 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt > 1:1112896/1‑91 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 1:2126401/91‑1 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt > 1:1486946/1‑91 (MQ=255) gATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtt > 2:1668862/1‑91 (MQ=255) gATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtt < 1:2421542/91‑1 (MQ=255) gATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtt > 2:437998/1‑91 (MQ=255) aaatAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtt > 2:563238/4‑91 (MQ=17) aatAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt > 2:2673880/3‑91 (MQ=17) atAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt > 1:536936/2‑91 (MQ=17) aGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCCGACTCTTGGATTTTaa > 2:3708859/1‑91 (MQ=255) cTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt > 2:421622/1‑91 (MQ=255) cTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt > 1:2470617/1‑91 (MQ=255) tATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATc < 1:1072397/91‑1 (MQ=255) aTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATcc > 2:907138/1‑91 (MQ=255) tGAAGAAATCTAT‑GACGNTAGATNTTTTCATAGCTATTTTTTANAGTTATAGAGAGGAGNAGACTGTCCAGACTCTTGGATTTTAAATNCg < 2:1020852/91‑1 (MQ=17) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:838564/91‑1 (MQ=255) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:838466/91‑1 (MQ=255) gaagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGt > 1:100186/1‑91 (MQ=255) aagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTa > 1:542583/1‑91 (MQ=255) aagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATACGTa < 2:1099938/91‑1 (MQ=255) agaaATCTAT‑GACGATAGATTTTCTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaa < 2:3613280/91‑1 (MQ=255) gaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaa < 1:3728070/91‑1 (MQ=255) aaTCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaa > 2:2690268/1‑91 (MQ=255) aTCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATTGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaa > 2:2739711/1‑91 (MQ=255) aTCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaa > 2:2333834/1‑91 (MQ=255) tCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaa > 1:3485394/1‑91 (MQ=255) tAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaaaa < 1:2859455/91‑2 (MQ=255) tAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaaaa < 1:932701/91‑2 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 1:3201488/1‑91 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 2:3050457/1‑91 (MQ=255) t‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACaa > 1:1866217/1‑91 (MQ=255) gACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAg < 2:1644069/91‑1 (MQ=255) gACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAg < 2:3273593/91‑1 (MQ=255) gACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAg > 1:3337180/1‑91 (MQ=255) aCGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGT‑AAAAAAACAAGTc < 2:2442998/91‑1 (MQ=255) gATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCa < 1:267964/91‑1 (MQ=255) | TAACTAAAACAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCA > USA300TCH1516_ALE/77885‑78065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |