| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,582,141 | Δ1 bp | 10.3% | coding (1169/1353 nt) | pnbA → | Para‑nitrobenzyl esterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,582,141 | 0 | T | . | 10.3% | 649.2 / 63.1 | 203 | coding (1169/1353 nt) | pnbA | Para‑nitrobenzyl esterase |
| Reads supporting (aligned to +/- strand): ref base T (93/88); new base . (9/12); total (103/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
TCAATATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTAAGTCGACA > USA300TCH1516_ALE/2582051‑2582231 | tCAATATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCatat < 1:1675878/91‑1 (MQ=255) cAATATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATAtt < 1:2565683/91‑1 (MQ=255) cAATATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATAtt > 1:3381736/1‑91 (MQ=255) aaTATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTc > 1:3008331/1‑91 (MQ=255) aaTATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTc > 1:3624028/1‑91 (MQ=255) atatACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCt > 2:1423989/1‑91 (MQ=255) tataCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCatatctag < 1:2344521/91‑5 (MQ=255) taCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑a < 2:2310406/91‑1 (MQ=255) taCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑a > 1:2063110/1‑91 (MQ=255) taCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑a > 1:1305981/1‑91 (MQ=255) taCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAG‑aa < 1:3879057/91‑2 (MQ=255) taCAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAG‑aa < 1:1923327/91‑2 (MQ=255) aCAAGATTCAAACGCACAACTATGGCTTACTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑at < 1:742315/91‑1 (MQ=255) aCAAGATGCAAACGCACAACCATGGCTTGCTGAAGTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAG‑aat < 2:1713595/91‑3 (MQ=255) cAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ata > 1:1431233/1‑91 (MQ=255) cAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ata < 2:3737924/91‑1 (MQ=255) cAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAG‑aata < 2:3871647/91‑4 (MQ=255) aaGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAG‑aatat < 2:1787821/91‑5 (MQ=255) gATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATA‑TCTAGAATATgg < 1:861698/91‑1 (MQ=255) atgcAAACGCACAACTATGGCTTGCTGAATTGGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGt < 1:3548038/88‑1 (MQ=255) aTTCAAACGCACAACTATGGCTTGCTGAATTTACATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGt < 2:2393319/91‑1 (MQ=255) ttCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTa < 1:2914681/91‑1 (MQ=255) ttCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTa > 1:574784/1‑91 (MQ=255) tCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTAt < 2:324028/91‑1 (MQ=255) cAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTAtt > 1:134545/1‑91 (MQ=255) aaaCGTACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTAttt < 2:3581325/91‑1 (MQ=255) gCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGt < 2:1279749/91‑1 (MQ=255) acaACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTc < 1:1972996/91‑1 (MQ=255) acaACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTc > 1:2870225/1‑91 (MQ=255) caACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCg > 1:255504/1‑91 (MQ=255) caACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCg > 1:255679/1‑91 (MQ=255) caACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCg < 1:3347883/91‑1 (MQ=255) aCTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGa > 2:3327527/1‑91 (MQ=255) aCTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGa > 2:1099197/1‑91 (MQ=255) aCTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGa > 1:1886344/1‑91 (MQ=255) tGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACt > 1:24356/1‑91 (MQ=255) gCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTa > 1:3032772/1‑91 (MQ=255) gCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTa < 2:1738592/91‑1 (MQ=255) gCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTa > 1:1561326/1‑91 (MQ=255) cTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTAc < 1:3248888/91‑1 (MQ=255) cTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTAc < 2:1451682/91‑1 (MQ=255) gCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACaaa > 1:3738991/1‑91 (MQ=255) gCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACaaa < 2:888867/91‑1 (MQ=255) cTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAat < 1:3515621/91‑1 (MQ=255) cTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAat < 2:3184802/91‑1 (MQ=255) tGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAata < 2:255732/91‑1 (MQ=255) tGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAata < 2:3798362/91‑1 (MQ=255) tttGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTag > 1:1738615/1‑91 (MQ=255) gcatggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTagcag > 1:1042305/1‑91 (MQ=255) catggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTgg < 2:3082546/65‑1 (MQ=255) atggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAgcagca < 2:1870467/91‑1 (MQ=255) atggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAgcagca < 2:3830417/91‑1 (MQ=255) atggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAgcagca > 2:932851/1‑91 (MQ=255) atggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAgcagca > 1:2774816/1‑91 (MQ=255) ggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGcaca < 1:2741196/91‑1 (MQ=255) ggcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGcaca > 1:1608629/1‑91 (MQ=255) gcatgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACAt > 2:585786/1‑91 (MQ=255) atgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCa > 1:529513/1‑91 (MQ=255) tgATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCaa > 2:719206/1‑91 (MQ=255) gATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAat < 1:3187753/91‑1 (MQ=255) gATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAat < 2:2086868/91‑1 (MQ=255) aTACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAata < 2:1272243/91‑1 (MQ=255) tACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAatat > 1:3072388/1‑91 (MQ=255) tACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAatat > 2:102897/1‑91 (MQ=255) caCTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAatat < 2:1766083/90‑1 (MQ=255) aCTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATc > 2:338043/1‑91 (MQ=255) cTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATcc < 2:664913/91‑1 (MQ=255) cTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATcc < 1:754461/91‑1 (MQ=255) ttCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCca > 2:3851754/1‑91 (MQ=255) ttCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCca < 1:409961/91‑1 (MQ=255) ttCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCca > 1:2842473/1‑91 (MQ=255) cTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCcaac < 1:151953/91‑1 (MQ=255) tAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCcaaca < 1:2500812/91‑1 (MQ=255) cgcACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACt > 1:1447191/1‑91 (MQ=255) acacTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCt < 1:78117/91‑1 (MQ=255) acacTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCt < 2:2349497/91‑1 (MQ=255) cacTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTc > 1:2535281/1‑91 (MQ=255) cTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCAc < 1:981577/91‑1 (MQ=255) cTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCAc < 2:3117251/91‑1 (MQ=255) tATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTTGCAGCACATCAATATCCAACAACTGCTCAcc < 1:3450464/91‑1 (MQ=255) tATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCAcc < 2:2774816/91‑1 (MQ=255) aTCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCt < 1:1712705/91‑1 (MQ=255) aTCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCt < 1:408164/91‑1 (MQ=255) aTCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCt > 1:2073082/1‑91 (MQ=255) aTCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCt < 2:1209048/91‑1 (MQ=255) aTCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCt > 2:2876269/1‑91 (MQ=255) tCGCAGTGCTTACCATACCCTAG‑TGATGTTATTTTGGCTCGGGAACTTGTAGATATTAGCATCAAATCAATATCCTACAACTGCTCAcata > 2:875291/1‑88 (MQ=255) cGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTa < 2:909563/91‑1 (MQ=255) gCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTaa < 2:2976289/91‑1 (MQ=255) gCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTaa < 2:1660682/91‑1 (MQ=255) aGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAAt < 1:1149196/91‑1 (MQ=255) gTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAAtt > 1:693060/1‑91 (MQ=255) gCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAAtttt > 2:547795/1‑91 (MQ=255) gCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAAtttt < 2:2757472/91‑1 (MQ=255) gCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAAtttt > 1:2363746/1‑91 (MQ=255) tACCATA‑TCTAGAATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTaa > 1:1356986/1‑91 (MQ=255) ccATA‑TCTAGAATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTAAGt > 1:2305277/1‑91 (MQ=255) ccATA‑TCTAGAATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTAAGt > 1:1910212/1‑91 (MQ=255) atatTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTAAGTCg < 2:2662790/91‑1 (MQ=255) ttCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATCTCCAACAACTGCTCACCTTAAATTTTTAAGTCGACa > 2:3059216/1‑91 (MQ=255) | TCAATATACAAGATTCAAACGCACAACTATGGCTTGCTGAATTTGCATGGCATGATACTTCTAGCGCACACTATCGCAGTGCTTACCATATTCTAG‑ATATGGTATTTTGGTTCGGAAACTTACAAATATTAGCAGCACATCAATATCCAACAACTGCTCACCTTAAATTTTTAAGTCGACA > USA300TCH1516_ALE/2582051‑2582231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |