| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 583,948 | A→T | 9.7% | intergenic (+32/‑240) | rplA → / → rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 583,948 | 0 | A | T | 9.7% | 595.0 / 42.1 | 185 | intergenic (+32/‑240) | rplA/rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Reads supporting (aligned to +/- strand): ref base A (86/81); new base T (10/8); total (96/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 207 total aligned reads displayed.
TTGCTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGT > USA300TCH1516_ALE/583858‑584038 | cTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAata > 2:670932/1‑91 (MQ=255) cTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAata < 1:2877945/91‑1 (MQ=255) gTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATc < 2:644221/91‑1 (MQ=255) aaCTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCtt > 2:180945/1‑91 (MQ=255) aCTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCttt > 2:516267/1‑91 (MQ=255) cTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTc < 1:3439627/91‑1 (MQ=255) cTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTc > 2:2398412/1‑91 (MQ=255) cTACAACAATGGGTCCGGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATAtttctttc < 2:3709575/91‑1 (MQ=38) acaacaATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAg < 1:922909/91‑1 (MQ=38) caacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGt < 1:2300264/91‑1 (MQ=255) caacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGt < 1:220809/91‑1 (MQ=255) aacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTc < 1:3721789/91‑1 (MQ=255) aacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTc < 1:2244585/91‑1 (MQ=255) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCt > 1:2917182/1‑91 (MQ=255) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAgcct < 2:2017135/91‑4 (MQ=38) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAgcct < 1:1424086/91‑4 (MQ=37) caaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTg > 2:2690637/1‑91 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaa > 1:1240271/1‑91 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaa < 1:2951138/91‑1 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa < 1:3401819/91‑1 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa < 1:1639966/91‑1 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa > 1:3072026/1‑91 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAGCCTGTaat < 1:606382/91‑2 (MQ=25) ggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaa < 1:2126979/91‑1 (MQ=255) ggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaa < 1:1474050/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAGGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa > 2:2220671/1‑91 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa < 1:2636296/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa > 2:2563597/1‑91 (MQ=255) tCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAat > 2:1057695/1‑91 (MQ=255) tCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAat > 2:2813448/1‑91 (MQ=255) cTGGAGTTAAAATTGATACTGCAAGTTTCAAATGATAAATGGTATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatat < 2:3881583/91‑1 (MQ=255) cTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatat < 2:2327403/91‑1 (MQ=255) ggAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat < 1:2309861/91‑1 (MQ=255) ggAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat > 1:3250693/1‑91 (MQ=255) aGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTg > 2:193137/1‑91 (MQ=255) ttAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTACAAATATATTGAc > 2:3226025/1‑91 (MQ=255) tAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACa > 2:3540504/1‑91 (MQ=255) aaaTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAAt > 1:2424609/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 2:2431095/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 1:2203557/1‑91 (MQ=255) tGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGt < 1:1126386/91‑1 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 1:395704/1‑91 (MQ=255) tACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAt < 2:3790838/91‑1 (MQ=255) tACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAt < 1:154400/91‑1 (MQ=255) aCTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATCGACAATAAGTAAtt < 2:3294404/91‑1 (MQ=255) cTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAttt > 1:3540810/1‑91 (MQ=255) gTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGt > 1:3326901/1‑91 (MQ=255) tttCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGtt < 2:2234309/91‑1 (MQ=255) tttCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGtt < 2:2108016/91‑1 (MQ=255) tCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtat < 2:357519/91‑1 (MQ=255) tCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtat > 2:1693743/1‑91 (MQ=255) tCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtat < 2:1217195/91‑1 (MQ=255) cAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtata < 2:1874055/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat < 2:3651566/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat > 2:2627453/1‑91 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTg > 1:2541171/1‑65 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt > 1:1731519/1‑91 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt > 1:3596073/1‑91 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt < 1:2467004/91‑1 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt < 2:3038147/91‑1 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt > 1:3771945/1‑91 (MQ=255) taataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTAc < 2:2191541/91‑1 (MQ=255) aataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTTACAATAAGTAATTTCCAAGTTATATTACt > 2:2290768/1‑91 (MQ=255) aataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACt < 2:1939445/91‑1 (MQ=255) aataaATGATACAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATAGTGACAATAAGTAATTTCCAAGTTATATTACt < 2:2969284/91‑1 (MQ=255) ataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACtt < 1:1293905/91‑1 (MQ=255) ataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACtt > 1:1400015/1‑91 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg > 1:2353360/1‑91 (MQ=255) tGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgt > 2:3683301/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGa > 1:886116/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGT‑AAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGat > 1:886375/1‑91 (MQ=255) ataAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGatt < 1:2690637/91‑1 (MQ=255) taAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGatta > 1:608015/1‑91 (MQ=255) aCAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGAGAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTAttt < 1:3355214/91‑1 (MQ=255) cAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTAtttt < 1:3506817/91‑1 (MQ=255) tttACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 2:899914/2‑91 (MQ=25) tttACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 1:968793/2‑91 (MQ=25) aTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 1:1086021/1‑91 (MQ=255) ttACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAcc > 2:3393524/1‑91 (MQ=37) tACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCt > 1:3383954/1‑91 (MQ=37) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 2:302605/1‑91 (MQ=255) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 1:59563/1‑91 (MQ=255) aCAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 2:1582924/1‑91 (MQ=37) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa < 2:785071/91‑1 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa > 2:1084695/1‑91 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa < 1:416530/91‑1 (MQ=255) aGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAg < 1:1059842/91‑1 (MQ=255) aGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAg < 1:1665206/91‑1 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:1552034/1‑91 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa < 2:2278633/91‑1 (MQ=255) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATTTTACTTATTGAGATTATTTTACCTAAGa > 1:755556/3‑91 (MQ=37) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 1:3465211/3‑91 (MQ=38) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:706821/3‑91 (MQ=38) gaaagaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGt < 2:576036/91‑1 (MQ=255) agaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAgg > 1:3038006/1‑91 (MQ=255) gaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGa > 1:899067/1‑91 (MQ=255) aaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAg < 2:2429519/91‑1 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACGTAAGACAGTAGGAGt > 1:1446137/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:73315/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:1442752/1‑91 (MQ=255) | TTGCTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGT > USA300TCH1516_ALE/583858‑584038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |