| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 583,951 | A→T | 8.0% | intergenic (+35/‑237) | rplA → / → rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 583,951 | 0 | A | T | 8.0% | 671.0 / 35.3 | 201 | intergenic (+35/‑237) | rplA/rplJ | 50S ribosomal protein L1/50S ribosomal protein L10 |
| Reads supporting (aligned to +/- strand): ref base A (99/86); new base T (10/6); total (109/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
CTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTAT > USA300TCH1516_ALE/583861‑584041 | cTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAata > 2:670932/1‑91 (MQ=255)cTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAata < 1:3052936/91‑1 (MQ=255) gTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATc < 2:644221/91‑1 (MQ=255) acaacaATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAg < 1:922909/91‑1 (MQ=38) caacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGt < 1:2300264/91‑1 (MQ=255) aacaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTc < 1:3721789/91‑1 (MQ=255) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCt > 1:2901796/1‑91 (MQ=255) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCt < 2:3047943/91‑1 (MQ=255) acaaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAgcct < 1:1424086/91‑4 (MQ=37) caaTGGGTCCTGGTGTTAAAATTGATACTGCAAGTTTCAAATAGTAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTg < 1:3881661/91‑1 (MQ=255) caaTGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTg > 2:2690637/1‑91 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaa > 1:1240271/1‑91 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaa < 1:2951138/91‑1 (MQ=255) tGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAGCCTGTaa < 2:1997376/91‑1 (MQ=37) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa < 1:1639840/91‑1 (MQ=255) gggTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaa < 2:3792785/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAGGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa > 2:2220671/1‑91 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa > 1:3393998/1‑91 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa > 2:2563597/1‑91 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTaaaaa < 1:2636227/91‑1 (MQ=255) gTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGACTGAAAGATATTTCTTTCAGCCTGTaattg < 2:1077700/91‑4 (MQ=25) tCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAat > 2:2813448/1‑91 (MQ=255) ggAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAatatat < 1:2309861/91‑1 (MQ=255) gAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATAtt < 2:423103/91‑1 (MQ=255) aGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTg > 2:193646/1‑91 (MQ=255) tAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACa > 2:3540504/1‑91 (MQ=255) aaaTTGATACTGAAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAAt > 1:2996190/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 1:2203558/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 1:2203355/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 2:2431095/1‑91 (MQ=255) aTTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATaa > 2:2329036/1‑91 (MQ=255) ttGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAg > 1:1492464/1‑91 (MQ=255) tGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGt < 1:1126386/91‑1 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 1:2223847/1‑91 (MQ=255) aTACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTaa > 2:1611111/1‑91 (MQ=255) tACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAt < 2:3790784/91‑1 (MQ=255) cTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAAttt < 1:2453203/91‑1 (MQ=255) gTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGt > 1:3326901/1‑91 (MQ=255) tttCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGtt < 2:2305077/91‑1 (MQ=255) tttCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGtt < 2:2234309/91‑1 (MQ=255) tCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtat < 2:359754/91‑1 (MQ=255) tCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTtat < 1:2385657/91‑1 (MQ=255) aaaTAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTatat > 2:2627453/1‑91 (MQ=255) aataatAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATAtt > 1:3771945/1‑91 (MQ=255) taataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTAc < 2:2045959/91‑1 (MQ=255) taataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTAc < 2:2191541/91‑1 (MQ=255) aataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTTACAATAAGTAATTTCCAAGTTATATTACt > 2:2290768/1‑91 (MQ=255) aataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACt < 1:350942/91‑1 (MQ=255) ataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACtt < 1:1293905/91‑1 (MQ=255) ataaATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACtt > 1:1400015/1‑91 (MQ=255) taaATGATATAAACAATTACAGGCTAAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTa < 2:1910597/91‑1 (MQ=255) aaTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTAtt > 2:350129/1‑91 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg < 1:1693743/91‑1 (MQ=255) aTGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtg > 1:3148080/1‑91 (MQ=255) tGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgt > 2:3683342/1‑91 (MQ=255) tGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgt > 2:3683287/1‑91 (MQ=255) gATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgtt > 1:3408998/1‑90 (MQ=255) gATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgtg > 1:3542663/1‑91 (MQ=255) gATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATtgtg > 2:3333946/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGa > 2:1222401/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGa > 1:414022/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGa > 1:886116/1‑91 (MQ=255) atatAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGT‑AAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGat > 1:886375/1‑91 (MQ=255) taAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGatta > 1:607645/1‑91 (MQ=255) aaaCAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGCCAATAAGTAATTTCCAAGTTATATTACTTATTGTGattat > 1:2491922/1‑91 (MQ=255) aCAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGAGAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTAttt < 1:3355214/91‑1 (MQ=255) aaTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTa < 2:3250693/91‑1 (MQ=255) tttACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 2:899914/2‑91 (MQ=25) tttACAGACTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 1:968793/2‑91 (MQ=25) aTTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTAc > 1:1086021/1‑91 (MQ=255) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 1:59683/1‑91 (MQ=255) aCAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTa > 2:302026/1‑91 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa < 2:1853869/91‑1 (MQ=255) cAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTaa < 2:785071/91‑1 (MQ=255) aGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAg < 1:1059842/91‑1 (MQ=255) aGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAg < 1:1665099/91‑1 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:3030317/1‑91 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:1552034/1‑91 (MQ=255) ggCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa < 2:2278633/91‑1 (MQ=255) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATTTTACTTATTGAGATTATTTTACCTAAGa > 1:755556/3‑91 (MQ=37) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:1087962/3‑91 (MQ=38) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 2:706821/3‑91 (MQ=38) gacTGAAAGATATTTCTTTCAGCCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGa > 1:3465073/3‑91 (MQ=38) tGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAg < 1:2113509/91‑1 (MQ=255) gaaagaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGt < 2:576036/91‑1 (MQ=255) aaagaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTa < 1:264533/91‑1 (MQ=255) agaaaTATCTTTCAGACTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTTCTTATTGTGATTATTTTACCTAAGACAGTAgg > 1:3302725/1‑91 (MQ=255) gaaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGa > 1:899067/1‑91 (MQ=255) aaaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAg < 2:2429519/91‑1 (MQ=255) aaTATCTTTCAGTCTGTAAAAATCTATTGACAATAAGTAATTTTCAAGATATATTACATATTGAGATTATTTTACCTAAGACAGTAGGAGt > 1:1445238/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:1446182/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:348070/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:2714126/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 1:73315/1‑91 (MQ=255) aaTATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGt > 2:177588/1‑91 (MQ=255) atatCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGtt > 2:1434952/1‑91 (MQ=255) tatCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGtta > 1:2270237/1‑91 (MQ=255) tatCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGtta > 2:1306137/1‑91 (MQ=255) atCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGttat > 1:458134/1‑91 (MQ=255) atCTTCCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGttat < 2:3675059/91‑1 (MQ=255) | CTGTAACTACAACAATGGGTCCTGGAGTTAAAATTGATACTGCAAGTTTCAAATAATAAATGATATAAACAATTACAGGCTGAAAGAAATATCTTTCAGTCTGTAAAAATATATTGACAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTAT > USA300TCH1516_ALE/583861‑584041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |