| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 770,855 | A→G | 6.1% | intergenic (+41/‑209) | ybaK → / → glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 770,855 | 0 | A | G | 6.1% | 737.9 / 24.9 | 231 | intergenic (+41/‑209) | ybaK/glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Reads supporting (aligned to +/- strand): ref base A (105/112); new base G (3/11); total (108/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.71e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
ATTTGATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTG > USA300TCH1516_ALE/770765‑770944 | tGATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACag > 2:3724722/1‑91 (MQ=255) gATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAGAAGTATGGGGCAAGATTAGGAGTGTGACaga < 2:2957488/91‑1 (MQ=255) gATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACaga < 2:3585981/91‑1 (MQ=255) ttACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAgaga < 1:1029018/91‑1 (MQ=255) ttACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAgaga < 2:676091/91‑1 (MQ=255) ttACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAgaga > 2:3767639/1‑91 (MQ=255) tACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGAt > 2:862782/1‑91 (MQ=255) cAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGa < 1:1894753/91‑1 (MQ=255) aaTAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAATAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGaa < 2:3776862/91‑1 (MQ=255) aTAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGaaa > 2:1403475/1‑91 (MQ=255) aTAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGaaa > 1:1675244/1‑91 (MQ=255) aaCTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAAAAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAtt < 2:1652890/91‑1 (MQ=255) aaGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtat > 1:3150480/1‑91 (MQ=255) aaGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtat < 1:3724722/91‑1 (MQ=255) aaGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtat > 2:1737600/1‑91 (MQ=255) aGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtata > 2:2647759/1‑91 (MQ=255) aGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtata < 1:3537067/91‑1 (MQ=255) aGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtata > 2:1532647/1‑91 (MQ=255) cAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATaaaa > 2:1702686/1‑91 (MQ=255) cAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATaaaa < 1:1176530/91‑1 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt < 2:2630674/91‑1 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt > 2:1315886/1‑91 (MQ=255) aaaaTTGGAGCAGTTAGCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt < 2:647672/91‑1 (MQ=255) aaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAtt < 2:2918293/91‑1 (MQ=255) aTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCa < 2:2992591/91‑1 (MQ=255) tGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt < 1:2981300/91‑1 (MQ=255) ggAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAttt > 2:804837/1‑91 (MQ=255) gAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTc > 2:2463121/1‑91 (MQ=255) ggCAGTTAGCCATGAATGAATAAAAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATctct < 2:2026041/90‑1 (MQ=12) aGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCt > 1:1732009/1‑91 (MQ=255) gCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTg > 1:2645217/1‑91 (MQ=255) gCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTg > 1:1354957/1‑91 (MQ=255) cAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTgt < 2:2786196/91‑2 (MQ=17) aGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGcc < 2:2740997/91‑1 (MQ=255) gTTATCCATGAATGATTAATAACACCGAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCca < 2:398889/91‑1 (MQ=255) gTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTgtca < 1:2720573/91‑4 (MQ=17) gTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCca < 1:1398619/91‑1 (MQ=255) ttATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcac > 2:1612294/1‑91 (MQ=255) tgaTCCATGAATGATAAAAAAAAAAAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcac < 2:3872442/89‑1 (MQ=255) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcaca < 2:97937/91‑1 (MQ=14) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcaca < 1:3571723/91‑1 (MQ=14) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcaca < 1:2057318/91‑1 (MQ=17) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcaca < 2:3590599/91‑1 (MQ=255) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcaca > 1:621358/1‑91 (MQ=255) aTCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCacac < 1:2306590/91‑1 (MQ=255) tCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACt < 1:1069107/91‑1 (MQ=14) tCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAGTTCTGCCACACt < 1:2991387/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTATGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 2:1425979/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 1:1824863/91‑1 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 2:614850/91‑1 (MQ=255) cATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTcc < 2:1136294/91‑1 (MQ=255) gaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGATAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttt > 1:3868951/1‑91 (MQ=255) gaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttt > 2:2363440/1‑91 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt > 1:1987714/1‑91 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt > 1:3803276/1‑91 (MQ=255) atgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcac < 2:2310612/81‑1 (MQ=255) gaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttga < 1:614109/91‑1 (MQ=255) aTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgat < 1:2649648/91‑1 (MQ=255) ttAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTATGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgatt > 1:3275594/1‑91 (MQ=255) taataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattg > 2:19544/1‑91 (MQ=255) taataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttg > 1:2355851/1‑87 (MQ=255) aataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattga > 1:2443889/1‑91 (MQ=255) taaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAtttt > 1:707362/1‑52 (MQ=255) taaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAtttt < 2:707362/52‑1 (MQ=255) aacaacAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAAtt > 2:2236100/1‑91 (MQ=255) caacaaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAg < 1:3312877/91‑1 (MQ=255) aacaaAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGc < 2:2826343/91‑1 (MQ=255) acaaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCa < 2:409326/91‑1 (MQ=255) acaaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCa > 2:210698/1‑91 (MQ=255) aaaaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAttt < 1:2850817/91‑1 (MQ=255) aaaaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAttt > 1:107522/1‑91 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc < 2:1769753/91‑1 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc < 1:2081870/91‑1 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc > 2:1534218/1‑91 (MQ=255) gTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACg > 2:3488803/1‑91 (MQ=255) gTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACg < 2:1591229/91‑1 (MQ=255) tATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGa < 1:970225/91‑1 (MQ=255) aTGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGAt < 1:2236100/91‑1 (MQ=255) tGGGGCAATATTAGGCGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATc < 2:3371064/91‑1 (MQ=255) tGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATc > 1:1254924/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa > 1:951401/1‑91 (MQ=255) ggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATa < 2:2148345/91‑1 (MQ=255) cAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaaa < 1:1118178/91‑1 (MQ=255) cAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaaa < 2:51549/91‑1 (MQ=255) ttAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTc < 2:1441887/91‑1 (MQ=255) ttAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTc < 2:3711137/91‑1 (MQ=255) ttAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGAACATAAACAGTc > 1:3510308/1‑91 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTTTTTTTATTAGCATTTTACGATCATAAACAGTCAt > 2:909854/1‑91 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATaa > 2:1359074/1‑83 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt < 2:1260239/91‑1 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt > 1:1520523/1‑91 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt > 1:2365373/1‑91 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt < 2:2410400/91‑1 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAtt < 1:862782/91‑1 (MQ=255) gAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATta > 1:1454316/1‑91 (MQ=255) aGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATtat < 2:2366989/91‑1 (MQ=255) aGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATtat > 2:3875848/1‑91 (MQ=255) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt < 2:3402453/91‑1 (MQ=255) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt < 2:3135943/91‑1 (MQ=255) gACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTg < 2:369003/91‑1 (MQ=255) | ATTTGATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTG > USA300TCH1516_ALE/770765‑770944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |