| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 950,088 | T→A | 14.4% | intergenic (+82/‑280) | yugI_2 → / → USA300HOU_RS04740 | General stress protein 13/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 950,088 | 0 | T | A | 14.4% | 677.0 / 92.0 | 236 | intergenic (+82/‑280) | yugI_2/USA300HOU_RS04740 | General stress protein 13/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (95/107); new base A (20/14); total (115/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01 | |||||||||||
Only 100 of 245 total aligned reads displayed.
AAACGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACA > USA300TCH1516_ALE/949997‑950176 | aaaCGACTAAAGGAACAGAT‑AATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAt < 1:2412035/91‑1 (MQ=255) aCGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAtt < 2:838021/91‑1 (MQ=255) aCGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAtt < 2:3069720/91‑1 (MQ=255) aCGACCAAAGGAACAGATAAATCGTTCCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAtt < 1:3616381/91‑1 (MQ=255) gACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCtaataa < 1:3253270/91‑1 (MQ=255) aCTAAAGGAGCAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTaaa < 1:1307843/91‑1 (MQ=255) aCTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGCTTACTCTCTATTaaa > 1:3519687/1‑91 (MQ=255) aCTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTaaa > 1:2441250/1‑91 (MQ=255) aCTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTaaa > 2:682438/1‑91 (MQ=255) cTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAt < 1:832818/91‑1 (MQ=255) cTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAt < 1:3189086/91‑1 (MQ=255) cTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAt < 2:2299998/91‑1 (MQ=255) tAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAtt > 1:100958/1‑91 (MQ=255) aaaGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAttt > 1:3324885/1‑91 (MQ=255) aaGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAtttt < 1:447318/91‑1 (MQ=255) aaGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAtttt > 1:1206032/1‑91 (MQ=255) aaGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAtttt < 2:2116600/91‑1 (MQ=255) aGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTtta > 1:3657035/1‑91 (MQ=255) cAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGa < 2:1367145/91‑1 (MQ=255) aGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGAt > 2:1921939/1‑91 (MQ=255) aTAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATAc > 1:1695555/1‑91 (MQ=255) aTAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATAc > 2:1888609/1‑91 (MQ=255) tAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACt < 2:3752662/91‑1 (MQ=255) tAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACt < 1:2477506/91‑1 (MQ=255) aaaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTa < 2:1667039/91‑1 (MQ=37) aaacGTACAGAAAATCATACAAATGATCTGAAATGAAAGTTTCTTAAATTATAATAGAGATTAGTATTTATTAAATTTTATTAGATACTaa < 2:1215804/88‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa < 2:1958711/91‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa > 1:3858939/1‑91 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa > 2:2737981/1‑91 (MQ=255) aTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAt > 2:1778084/1‑91 (MQ=255) tCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAtc < 1:1452566/91‑1 (MQ=255) tCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAtc < 1:3447213/91‑1 (MQ=255) cGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGCCTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTTAtct < 1:3070212/91‑1 (MQ=255) cGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAtct < 1:1992915/91‑1 (MQ=255) cGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTAAtct < 2:1415998/91‑1 (MQ=25) tACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATctct < 1:1070822/91‑1 (MQ=255) tACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATctct < 1:2995360/91‑1 (MQ=255) aCCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCtt > 2:3276213/1‑91 (MQ=255) cGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCtttt > 1:2746067/1‑91 (MQ=255) gAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCttttt < 1:255874/91‑1 (MQ=255) aaaaTCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTg > 2:2487160/1‑91 (MQ=255) tACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGa > 1:3430889/1‑91 (MQ=255) tACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGa > 1:3756644/1‑91 (MQ=255) cAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATa > 2:3473744/1‑91 (MQ=255) cAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATa > 1:903049/1‑91 (MQ=255) cAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATa > 2:935531/1‑91 (MQ=255) aaaGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATaa > 1:1909151/1‑91 (MQ=255) gggTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGt < 1:819527/91‑1 (MQ=255) gggTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGt > 2:3525067/1‑91 (MQ=255) gggTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTACTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGt > 2:3194610/1‑91 (MQ=255) gTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTaa < 2:2444637/91‑1 (MQ=255) gTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTaa > 1:3884510/1‑91 (MQ=255) tCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAat > 2:1403897/1‑91 (MQ=255) cTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAata > 2:1465851/1‑91 (MQ=255) cTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAata < 1:3337268/91‑1 (MQ=255) tgaaatgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAatat > 2:2783870/1‑91 (MQ=255) gaaatgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtg > 2:3391594/1‑91 (MQ=255) aatgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgat > 1:2373669/1‑91 (MQ=255) atgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgatt > 1:689678/1‑91 (MQ=255) tgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattg < 1:1831514/91‑1 (MQ=255) gaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattga < 1:377702/91‑1 (MQ=255) aaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattgat > 1:582449/1‑91 (MQ=255) aaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattgat > 2:3861848/1‑91 (MQ=255) aaaGTTTCTTAGACTATAAAAGAGATAAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattgat > 2:2211787/1‑91 (MQ=255) aaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATgattgatt < 1:2649181/91‑1 (MQ=255) aGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTc > 2:1144353/1‑91 (MQ=255) gTTTCTTAGACTATAGAATAGATTAGTATCTATAAAATTTTATTAGCTACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCt < 1:1108127/91‑1 (MQ=38) tttCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTa < 1:2210/91‑1 (MQ=255) cTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAttt > 2:378626/1‑91 (MQ=255) cTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAttt > 2:569462/1‑91 (MQ=255) ttAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTa > 2:1730076/1‑91 (MQ=255) tAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTac > 1:2810474/1‑91 (MQ=255) aGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTaca < 2:587527/91‑1 (MQ=255) gACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTacac < 2:903049/91‑1 (MQ=255) aCTATAAAAGATATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACg < 1:3523625/91‑1 (MQ=255) cTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGt < 2:2388503/91‑1 (MQ=255) tataAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTa < 2:3868633/91‑1 (MQ=255) taAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACa < 2:2059162/91‑1 (MQ=255) taAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACa < 2:3649684/91‑1 (MQ=255) aaaaaGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACa < 1:2559084/90‑1 (MQ=255) aaaGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACaaa < 1:1723956/91‑1 (MQ=255) aaGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAAt > 2:3580939/1‑91 (MQ=255) agagATTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATg > 1:2363663/1‑91 (MQ=25) agaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGt < 2:2444233/91‑1 (MQ=255) agaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGt < 2:2296629/91‑1 (MQ=255) agaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGt < 2:1518035/91‑1 (MQ=255) agaTTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGt > 1:504123/1‑91 (MQ=25) gaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGtt > 2:2989785/1‑91 (MQ=255) gaTTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGtt > 2:3063439/1‑91 (MQ=25) aTTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGttt > 2:259194/1‑91 (MQ=25) aTTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGttt > 2:1301229/1‑91 (MQ=25) ttAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTa < 1:322940/91‑1 (MQ=255) tAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTaa > 1:954078/1‑91 (MQ=255) aGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg < 2:1046604/91‑1 (MQ=255) aGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTTTATTTTTACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 2:282512/1‑91 (MQ=21) aGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 1:2261645/1‑91 (MQ=37) aTCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTg > 1:499666/1‑91 (MQ=37) tCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGa < 1:1412663/91‑1 (MQ=255) tCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGa > 1:2025186/1‑91 (MQ=255) tATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACa > 2:271810/1‑91 (MQ=255) | AAACGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACA > USA300TCH1516_ALE/949997‑950176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |