| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,044,663 | T→C | 9.6% | intergenic (+12/+34) | yfmC_1 → / ← USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,044,663 | 0 | T | C | 9.6% | 738.7 / 48.2 | 247 | intergenic (+12/+34) | yfmC_1/USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (124/99); new base C (11/13); total (135/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAAT > USA300TCH1516_ALE/1044573‑1044753 | gTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCt < 1:2954779/91‑1 (MQ=255)gTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCt < 1:721396/91‑1 (MQ=255)gTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCt > 2:366703/1‑91 (MQ=255) gTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACt < 2:1088245/91‑1 (MQ=255) gTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACt > 1:2239220/1‑91 (MQ=255) gTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACt > 2:431408/1‑91 (MQ=255) gTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACt < 2:2418207/91‑1 (MQ=255) gTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACt > 1:1798981/1‑91 (MQ=255) gtGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTc < 2:2540618/90‑1 (MQ=255) tGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCg > 1:2593198/1‑91 (MQ=255) gAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGt < 2:266088/91‑1 (MQ=255) gAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGt < 2:3554295/91‑1 (MQ=255) gAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGt < 1:2846313/91‑1 (MQ=255) aTCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTaaa > 1:22929/1‑91 (MQ=255) tCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAAt > 2:3877663/1‑91 (MQ=255) tCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAAt > 2:3458767/1‑91 (MQ=255) aGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCat > 2:3082155/1‑91 (MQ=255) ggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATaa > 2:2750235/1‑91 (MQ=255) ggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATaa > 1:1272041/1‑91 (MQ=255) aTTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAaga < 2:882543/91‑1 (MQ=255) tATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGt < 1:1102836/91‑1 (MQ=25) tCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTgg > 1:2878686/1‑91 (MQ=255) cGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc > 1:1780156/1‑91 (MQ=255) cGCAAGAGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGtagc < 2:156485/91‑4 (MQ=18) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg > 2:941040/1‑91 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg < 1:858864/91‑1 (MQ=255) aaGTGAAAGTATGGCAGAAGATTTAGAAACAATGGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCt < 1:483634/91‑1 (MQ=255) gTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGt < 2:836467/91‑1 (MQ=17) gTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGt < 2:122784/91‑1 (MQ=17) tGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTa < 1:2890280/91‑1 (MQ=255) gAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAt > 1:317578/1‑91 (MQ=255) aaaGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtt > 1:3543564/1‑91 (MQ=255) aaGTATGGCAGAAGACTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGCGGCGCTGTAttt > 2:3645666/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 2:2695378/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 1:1665485/1‑91 (MQ=255) aGTATGGAAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt < 2:3106545/91‑1 (MQ=255) gTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAttttt > 2:2103518/1‑91 (MQ=255) gTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAttttt > 2:2225589/1‑91 (MQ=255) tATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTa < 1:1406438/91‑1 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCGGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAAt < 2:3829762/91‑1 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt > 1:1998588/1‑91 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt < 2:1720304/91‑1 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt < 2:1860672/91‑1 (MQ=255) agaagaGTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 2:3264871/91‑1 (MQ=255) gaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTtta < 1:1461100/91‑1 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat < 1:3331038/91‑1 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat > 2:3869249/1‑91 (MQ=255) ttAGAAAAAATTGCTGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttatta < 1:1181649/91‑1 (MQ=255) ttAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttatta < 1:813329/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:999331/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:3056194/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:77490/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:280505/1‑91 (MQ=255) aGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATc > 2:1009729/1‑91 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:3736134/91‑1 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:2257837/91‑1 (MQ=255) aaaaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTg < 1:1002222/91‑1 (MQ=255) aaaaaTTGCATAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGt < 2:1202913/91‑1 (MQ=255) aaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATAATATAAGAGTGGCGCTGTATTTTTAATTATGCTTATTATCTGTc > 1:1118615/1‑91 (MQ=255) aaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCgg < 1:1321493/91‑1 (MQ=255) aTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGa < 1:3583245/91‑1 (MQ=255) aTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGa < 1:1726087/91‑1 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGCAtg > 1:3496234/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:1072183/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 2:582500/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 1:3656924/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:23701/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGAAGCGCTGTATTTTTAATTATGTTTATTATATGTCGGAtgtg > 2:20330/1‑91 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 2:2481024/1‑91 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 1:1601271/1‑91 (MQ=255) gAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtgat > 1:2634149/1‑91 (MQ=255) gAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtgat < 1:520091/91‑1 (MQ=255) aaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt < 2:789093/91‑1 (MQ=255) aaGCAAAATAAAAATAAAGCGCTACTCGTAAATCATATAAGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt < 2:3474808/91‑1 (MQ=255) gCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTa > 2:1495103/1‑91 (MQ=255) cAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAc > 1:1535134/1‑91 (MQ=255) cAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAc > 2:1837850/1‑91 (MQ=255) cAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAc > 1:37880/1‑91 (MQ=255) aaaataaaaataCAGTGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTGTTATCTGTCGGATGTGATGATTTAcc > 1:1487927/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc > 1:2655127/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc < 2:2960378/91‑1 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc > 2:163974/1‑91 (MQ=255) aattaaaaataCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 1:2957015/4‑91 (MQ=11) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 1:3379387/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:1920118/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg > 1:2166687/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg > 1:560801/1‑91 (MQ=255) taaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa < 1:2410113/91‑1 (MQ=255) aaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa < 2:3230649/91‑1 (MQ=255) aaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAg < 1:3086149/91‑1 (MQ=255) aaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAg < 2:1998588/91‑1 (MQ=255) aaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGt > 2:2864852/1‑91 (MQ=255) aaataCAGCGCTACTCGTAAATCATATAAGAGCGGCGCTGTACCTCTCATTATGTTTATTCCCTGTCGGATGTGATGATTTACCTGAAAgc > 2:2052286/1‑90 (MQ=255) aataCAGCGCTACTCGTAAATCATGTAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGtt > 1:2767664/1‑91 (MQ=255) ataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGttt > 2:490980/1‑91 (MQ=255) taCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTa > 1:1824279/1‑91 (MQ=17) aCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTAt > 1:401063/1‑91 (MQ=255) cgcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCg > 2:3062353/1‑91 (MQ=255) gcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGa < 1:923581/91‑1 (MQ=255) gcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGa < 2:1576102/91‑1 (MQ=255) | GTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAAT > USA300TCH1516_ALE/1044573‑1044753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |