| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,044,668 | G→T | 9.5% | intergenic (+17/+29) | yfmC_1 → / ← USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,044,668 | 0 | G | T | 9.5% | 802.7 / 53.8 | 239 | intergenic (+17/+29) | yfmC_1/USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (119/96); new base T (11/12); total (130/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 240 total aligned reads displayed.
TGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAT > USA300TCH1516_ALE/1044578‑1044757 | gAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGt < 1:2846334/91‑1 (MQ=255) gAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGt < 2:266088/91‑1 (MQ=255) aaTCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTaa < 2:3168266/91‑1 (MQ=255) aaTCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTaa > 2:1858263/1‑91 (MQ=255) aTCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTaaa > 1:22929/1‑91 (MQ=255) tCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAAt > 2:3877663/1‑91 (MQ=255) cAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATc > 1:1781920/1‑91 (MQ=255) aGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCat > 2:3082155/1‑91 (MQ=255) aGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCat > 1:1461648/1‑91 (MQ=255) ggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATaa > 1:1272041/1‑91 (MQ=255) aTTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAaga < 2:882543/91‑1 (MQ=255) tATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTGAATCATATAAGAGt < 1:1713154/91‑1 (MQ=255) aTCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGAAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTg < 2:2454386/91‑1 (MQ=255) tCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTgg > 2:2208438/1‑91 (MQ=255) tCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTgg < 2:2339811/91‑1 (MQ=255) cGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc > 1:613546/1‑91 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg > 2:941040/1‑91 (MQ=255) aaGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCt < 1:3526952/91‑1 (MQ=255) aGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTg > 2:2970441/1‑91 (MQ=255) aGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTg > 2:3431937/1‑91 (MQ=255) tGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTa < 1:894054/91‑1 (MQ=255) gAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAt > 1:317578/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 1:151632/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 2:2695378/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 1:1664090/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTAtttt < 2:2076859/91‑1 (MQ=17) aGTATGGAAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt < 2:3106545/91‑1 (MQ=255) gTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAttttt < 2:2500338/91‑1 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAAt < 1:3082155/91‑1 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAAt > 1:1928552/1‑91 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTatt < 1:358/91‑3 (MQ=14) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTatt < 1:2396622/91‑3 (MQ=14) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt > 1:2623089/1‑91 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt > 1:1576102/1‑91 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt < 2:1720304/91‑1 (MQ=255) agaagaGTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 2:3264871/91‑1 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat > 2:3867494/1‑91 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat > 2:3869249/1‑91 (MQ=255) tttAGAAAAAATTGCAGATAAAGCAGGTTAAAAATACAGTGCTACTCGTAAATCATAGAAGTGTGGCGCTGTAATTTTCATTATGTttatt > 2:1523630/1‑91 (MQ=255) ttAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttatta > 1:3773094/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:3056194/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:2752620/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:50221/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:1090456/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:999331/91‑1 (MQ=255) aGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATc > 2:1009729/1‑91 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 1:2640798/91‑1 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:3738408/91‑1 (MQ=255) aaaaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTg < 1:1002222/91‑1 (MQ=255) aaaaaTTGCATAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGt < 2:1202913/91‑1 (MQ=255) aaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCgg < 1:1321493/91‑1 (MQ=255) ttGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAt < 1:3458767/91‑1 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg < 1:1422922/91‑1 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCATAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg < 2:2239220/91‑1 (MQ=255) gCAGAAAAAGCAAAATAAAAATACAGCGCTACACGTAAATCATATAAGAGTGGCGCTGTATTTCTAATTATGTATATTATCTGTCAGAtgt > 2:1226836/1‑91 (MQ=39) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 2:582500/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:1072183/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 1:115770/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:23701/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 1:818381/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 1:3594039/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGAAGCGCTGTATTTTTAATTATGTTTATTATATGTCGGAtgtg > 2:20330/1‑91 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 2:834063/1‑91 (MQ=255) gAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtgat < 1:520091/91‑1 (MQ=255) aaaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTgatgat < 1:2238579/91‑1 (MQ=255) aaaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTAAATTATGTTTATTATCTGTCGGATGTgatgat > 1:3319406/1‑91 (MQ=255) aaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt < 2:789093/91‑1 (MQ=255) aaGCAAAATAAAAATAAAGCGCTACTCGTAAATCATATAAGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt < 2:3474808/91‑1 (MQ=255) gCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTa > 2:1495103/1‑91 (MQ=255) gCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTa < 2:2752620/91‑1 (MQ=255) cAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAc > 2:1837850/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc > 2:163974/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc < 1:3801/91‑1 (MQ=255) aattaaaaataCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 1:2957015/4‑91 (MQ=11) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 1:3379387/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:1920118/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:3697686/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg > 1:2166687/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg > 2:1955016/1‑91 (MQ=255) ttaaaaataCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGa > 2:456600/2‑91 (MQ=17) taaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa > 2:3512021/1‑91 (MQ=255) aaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa < 1:982298/91‑1 (MQ=255) aaaaataCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa > 2:2860290/1‑91 (MQ=14) aaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGt < 1:779190/91‑1 (MQ=255) aaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCAGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGt > 2:2052248/1‑91 (MQ=255) aataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGtt > 1:2767901/1‑91 (MQ=255) ataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGttt < 1:1776503/91‑1 (MQ=255) ataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGttt > 2:491083/1‑91 (MQ=255) taCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTa > 1:1824279/1‑91 (MQ=17) taCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATATTTAATTATGTTTATTATCTGTCGGGTGTGATGATTTACCTGAAAGTTTa > 2:3597761/1‑91 (MQ=17) aCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTAt > 1:401063/1‑91 (MQ=255) aCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTAt > 1:2884257/1‑91 (MQ=255) cAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTCTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTAtt > 1:772451/1‑91 (MQ=18) gcgcCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTc > 1:1117954/1‑91 (MQ=18) cgcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCg > 2:3062353/1‑91 (MQ=255) gcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGa < 2:1576101/91‑1 (MQ=255) tACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAAt < 1:2894173/91‑1 (MQ=255) aCTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATa < 1:15473/91‑1 (MQ=255) tCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATaaa > 2:1683994/1‑91 (MQ=255) cGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAt < 2:2878686/91‑1 (MQ=255) | TGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAT > USA300TCH1516_ALE/1044578‑1044757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |