| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,044,674 | C→G | 9.4% | intergenic (+23/+23) | yfmC_1 → / ← USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,044,674 | 0 | C | G | 9.4% | 790.8 / 51.4 | 240 | intergenic (+23/+23) | yfmC_1/USA300HOU_RS05165 | Fe(3+)‑citrate‑binding protein YfmC/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (119/97); new base G (11/12); total (131/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 242 total aligned reads displayed.
CAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAATTTAATTA > USA300TCH1516_ALE/1044584‑1044764 | cAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATc > 1:1781920/1‑91 (MQ=255) aGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCat > 1:1461648/1‑91 (MQ=255) gggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCAtata > 1:2683015/1‑91 (MQ=255) ggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATaa > 2:2750235/1‑91 (MQ=255) ggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATaa > 1:1272041/1‑91 (MQ=255) aTTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAaga < 2:882543/91‑1 (MQ=255) tATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTGAATCATATAAGAGt < 1:1713154/91‑1 (MQ=255) tATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGt > 1:91218/1‑91 (MQ=255) tCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTgg < 2:2339811/91‑1 (MQ=255) tCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTgg > 2:2208438/1‑91 (MQ=255) cGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc > 1:613546/1‑91 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg < 1:858864/91‑1 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg > 2:941040/1‑91 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg < 2:2683015/91‑1 (MQ=255) aaatGAAAATAGAGCATAAGATTTAGAAAAAATTGAAGAAAAAAAAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCt < 2:3509642/88‑1 (MQ=255) aaGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCt < 2:3461636/91‑1 (MQ=255) aGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTg < 1:437326/91‑1 (MQ=255) gTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGt < 2:3096092/91‑1 (MQ=255) gTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGt < 2:122784/91‑1 (MQ=17) tGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTa < 1:2890280/91‑1 (MQ=255) gAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAt < 1:390665/91‑1 (MQ=255) gAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAt > 1:317563/1‑91 (MQ=255) gAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTAt < 1:3201735/91‑1 (MQ=17) aaaGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtt > 1:3543564/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 1:1665485/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt > 1:151632/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTAtttt < 1:3631805/91‑1 (MQ=17) gTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAttttt > 2:2103518/1‑91 (MQ=255) gTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAttttt < 1:797667/91‑1 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAAt > 1:2021175/1‑91 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAAt > 1:1928552/1‑91 (MQ=255) tGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTatt < 1:358/91‑3 (MQ=14) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt > 1:1576102/1‑91 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt < 2:1720304/91‑1 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTAt < 2:1860672/91‑1 (MQ=255) agaagaGTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 2:3264871/91‑1 (MQ=255) gaagaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGt > 2:3078521/1‑91 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat < 1:3331038/91‑1 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat > 2:3867494/1‑91 (MQ=255) aTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttat > 2:3869249/1‑91 (MQ=255) tttAGAAAAAATTGCAGATAAAGCAGGTTAAAAATACAGTGCTACTCGTAAATCATAGAAGTGTGGCGCTGTAATTTTCATTATGTttatt > 2:1523630/1‑91 (MQ=255) ttAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTttatta > 1:3773094/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:999628/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:77490/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:1090456/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:50221/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:280505/1‑91 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:2257837/91‑1 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:3738408/91‑1 (MQ=255) aaaaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTg < 1:1002222/91‑1 (MQ=255) aaaaaTTGCATAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGt < 2:1202913/91‑1 (MQ=255) aaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCgg < 1:1321493/91‑1 (MQ=255) ttGCAAAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAt < 2:1211906/91‑1 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg < 1:1422922/91‑1 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGCAtg > 1:3496234/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 1:115770/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:1072183/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:23701/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGAAGCGCTGTATTTTTAATTATGTTTATTATATGTCGGAtgtg > 2:20330/1‑91 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 2:2481024/1‑91 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 2:834063/1‑91 (MQ=255) gAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtgat < 1:2313120/91‑1 (MQ=255) gAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtgat > 1:2634149/1‑91 (MQ=255) aaaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTgatgat < 1:2238579/91‑1 (MQ=255) aaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt < 2:789093/91‑1 (MQ=255) gCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTa > 2:1495103/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc < 2:2960378/91‑1 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc > 2:163974/1‑91 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTCAcc > 1:3008298/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:1920118/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:3697686/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg > 2:1746171/1‑91 (MQ=255) ttaaaaataCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGa > 2:456600/2‑91 (MQ=17) taaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa < 1:2410113/91‑1 (MQ=255) aaaaataCAGCGTTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa < 2:2567048/91‑1 (MQ=255) aaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa < 2:3230649/91‑1 (MQ=255) aaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaaa < 1:982298/91‑1 (MQ=255) aaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAg < 1:2876193/91‑1 (MQ=255) aaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAg < 2:1998588/91‑1 (MQ=255) aaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAg < 1:536380/91‑1 (MQ=255) aaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCAGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGt > 2:2052248/1‑91 (MQ=255) aataCAGCGCTACTCGTAAATCATGTAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGtt > 1:2767664/1‑91 (MQ=255) aataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGtt < 1:2951011/91‑1 (MQ=255) ataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGttt > 2:491083/1‑91 (MQ=255) ataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGttt < 1:1776503/91‑1 (MQ=255) taCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTa > 1:1824279/1‑91 (MQ=17) taCAGCGCCACTCTTATATGATTTACGAGTAGCGCTGTATATTTAATTATGTTTATTATCTGTCGGGTGTGATGATTTACCTGAAAGTTTa > 2:3597761/1‑91 (MQ=17) aGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTAttt < 1:3069106/91‑1 (MQ=255) gcgcCACTCTTATATGATTTACGAGTAGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTc > 1:1117954/1‑91 (MQ=18) cgcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCg > 2:3062353/1‑91 (MQ=255) gcTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGa < 2:1576102/91‑1 (MQ=255) aCTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATa < 2:554125/91‑1 (MQ=255) aCTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATa < 1:15473/91‑1 (MQ=255) cGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAt > 2:1706234/1‑91 (MQ=255) cGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAt < 2:2878686/91‑1 (MQ=255) tAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAttt > 1:3439925/1‑91 (MQ=255) tAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAAttt > 2:1015883/1‑91 (MQ=255) aaaTCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAATTTa > 1:3569351/1‑91 (MQ=255) aaTCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAATTTaa < 1:3402182/91‑1 (MQ=255) aaTCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAATGTaa > 1:3487254/1‑91 (MQ=255) | CAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAAAGTTTATTTCGAATAAATTTAATTA > USA300TCH1516_ALE/1044584‑1044764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |