| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 70,101 | A→T | 6.1% | I228N (ATT→AAT) | argF_1 ← | Ornithine carbamoyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 70,101 | 0 | A | T | 6.1% | 661.6 / 23.2 | 195 | I228N (ATT→AAT) | argF_1 | Ornithine carbamoyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (89/94); new base T (5/7); total (94/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 206 total aligned reads displayed.
TCTTTAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCGATTTA > USA300TCH1516_ALE/70011‑70191 | cTTTAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAAt > 2:1494888/1‑91 (MQ=255) tttAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTACCCAAACTTCATCAGGTTCACCCATCGATACCCAAACATCTG‑TGTAAAtt > 2:3600295/1‑91 (MQ=255) tAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTAc > 2:586371/1‑91 (MQ=255) tAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTAc < 2:280181/91‑1 (MQ=255) ttACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTGATGTAATTTACac < 1:2565850/91‑2 (MQ=38) ttACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATc < 2:1297397/91‑1 (MQ=255) tACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTGATGTAATTTACaca < 2:3115218/91‑3 (MQ=38) tACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTGATGTAATTTACaca < 1:1708528/91‑3 (MQ=38) acacGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAg > 1:364895/1‑91 (MQ=255) acacGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAg < 1:3859794/91‑1 (MQ=255) ggTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATcc > 1:1432270/1‑91 (MQ=255) tATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCtt > 2:633336/1‑91 (MQ=255) aTGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCttt < 1:476207/91‑1 (MQ=255) aTGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCttt < 2:3256028/91‑1 (MQ=255) aTGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCttt > 1:1375030/1‑91 (MQ=255) ggTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGa < 2:601415/91‑1 (MQ=255) ggTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGa < 2:2004311/91‑1 (MQ=255) gTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGac > 1:139064/1‑91 (MQ=255) gTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGac < 1:236163/91‑1 (MQ=255) aataatTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCtt > 1:2112002/1‑91 (MQ=255) aataatTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCtt < 2:2084113/91‑1 (MQ=255) ataatTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTtc < 2:283295/91‑1 (MQ=255) atTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTtcatc < 2:2624686/91‑1 (MQ=255) atTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTtcatc > 2:489367/1‑91 (MQ=255) atTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTtcatc > 2:430667/1‑91 (MQ=255) tttGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTtcatca > 1:3174456/1‑91 (MQ=255) tGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAat > 1:2848777/1‑91 (MQ=255) cGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATatcat < 1:160178/91‑1 (MQ=255) gTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATatcatc < 1:3737509/91‑1 (MQ=255) gTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATatcatc < 1:1079242/91‑1 (MQ=255) ttttCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTTACACCTTCATCAATATCATCAg > 1:2010397/1‑91 (MQ=255) tttCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGt < 2:1011545/91‑1 (MQ=255) tttCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGt > 2:293197/1‑91 (MQ=255) tttCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGt < 2:364981/91‑1 (MQ=255) tCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTta > 2:2697489/1‑91 (MQ=255) tCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTta > 1:186595/1‑91 (MQ=255) tCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTta < 2:2812434/91‑1 (MQ=255) cccAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTtat < 2:2019198/91‑1 (MQ=255) ccAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTtata < 1:911668/91‑1 (MQ=255) cAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATaa < 2:3424127/91‑1 (MQ=255) cAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATaa > 1:1723679/1‑91 (MQ=255) aaaCTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAg > 1:3759170/1‑91 (MQ=255) aaaCTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAg > 2:3025857/1‑91 (MQ=255) aaCTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAgg < 1:3583515/91‑1 (MQ=255) aaCTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAgg < 2:1692489/91‑1 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 1:1051217/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 2:1881778/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 1:1238253/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 2:2498929/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 2:1596567/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 1:1615716/1‑91 (MQ=255) atcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTca > 1:2172240/1‑91 (MQ=255) tcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcac > 1:2152910/1‑91 (MQ=255) tcaGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcac > 2:2999797/1‑91 (MQ=255) caGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcacc < 2:283818/91‑1 (MQ=255) caGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcacc < 1:2446401/91‑1 (MQ=255) ggTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcaccac < 1:536427/91‑1 (MQ=255) ggTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTcaccac < 2:865392/91‑1 (MQ=255) gTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCaccacc < 2:1379620/91‑1 (MQ=255) cACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGtt < 2:2292345/91‑1 (MQ=255) aCCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGttt > 2:2244124/1‑91 (MQ=255) aCCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGttt < 2:920736/91‑1 (MQ=255) aCCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGttt < 1:2640293/91‑1 (MQ=255) aCCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGttt > 1:3862281/1‑91 (MQ=255) cccATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGtttt < 1:1015482/91‑1 (MQ=255) ccATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGttttt < 1:3362034/91‑1 (MQ=255) aTAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGt < 2:2155094/91‑1 (MQ=255) aTAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGt < 2:2152498/91‑1 (MQ=255) aTAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGt < 2:2870854/91‑1 (MQ=255) tAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTc > 2:6786/1‑91 (MQ=255) tAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTc < 1:1216566/91‑1 (MQ=255) tAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTc > 2:1127387/1‑91 (MQ=255) tAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTc > 1:2336141/1‑91 (MQ=255) aTACCGAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGc < 2:3575357/91‑1 (MQ=255) tACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCt > 2:2270886/1‑91 (MQ=255) tACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCt < 1:1494888/91‑1 (MQ=255) tACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCt < 1:2810649/91‑1 (MQ=255) cccAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCtat < 2:1573457/91‑1 (MQ=255) cccAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCtat > 2:3357807/1‑91 (MQ=255) cccAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCtat < 1:3679980/91‑1 (MQ=255) cAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTatat < 2:1783832/91‑1 (MQ=255) cAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTatat < 1:296427/91‑1 (MQ=255) aaCATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCa < 2:2202913/91‑1 (MQ=255) aCATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCAt < 1:1142582/91‑1 (MQ=255) cATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCAtt < 2:1160791/91‑1 (MQ=255) tCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTGTATCATTac > 1:3483603/1‑91 (MQ=255) cTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTaca < 2:1451434/91‑1 (MQ=255) tg‑tgTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTacac > 1:3817511/1‑91 (MQ=255) tg‑tgTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTacac < 1:2498929/91‑1 (MQ=255) gatgtAATTTACA‑CAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACAcc > 2:1243046/3‑91 (MQ=255) gatgtAATTTACA‑CAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACAcc > 2:2901590/3‑91 (MQ=255) gatgtAATTTACA‑CAGATCCTTTCACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACAcc > 2:3507759/3‑91 (MQ=255) g‑tgtAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACAcc > 2:776657/1‑91 (MQ=255) g‑tgtAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACAcc < 1:3436406/91‑1 (MQ=255) atgtAATTTACA‑CAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCg > 1:3693689/2‑91 (MQ=255) tgtAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCg > 1:1574100/1‑91 (MQ=255) tgtAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCg < 1:2662787/91‑1 (MQ=255) aaaTTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCGAtt < 1:1231302/91‑1 (MQ=255) aaaTTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCGAtt < 2:3381843/91‑1 (MQ=255) aTTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCGATTta < 1:619657/91‑1 (MQ=255) | TCTTTAGTTACACGGTATGGTTCTAATAATTTGATACGTTTTTCCCAAACTTCATCAGGTTCACCCATAGATACCCAAACATCTG‑TGTAAATTACATCAGATCCTTTGACACCTTCATCAATATCATCAGTTATAAGGATTTCACCACCGTTTTTGTCAGCTATATCATTACACCGATTTA > USA300TCH1516_ALE/70011‑70191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |