| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,221,653 | G→A | 7.1% | intergenic (+68/‑148) | rpoZ → / → coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,221,653 | 0 | G | A | 7.1% | 626.0 / 23.2 | 196 | intergenic (+68/‑148) | rpoZ/coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Reads supporting (aligned to +/- strand): ref base G (85/97); new base A (2/12); total (87/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.38e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
GTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221563‑1221743 | gTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACg < 2:2773677/91‑1 (MQ=255)gTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACg < 1:3231223/91‑1 (MQ=255) gATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCa > 2:3475208/1‑91 (MQ=255) attattATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAc > 1:1018288/1‑91 (MQ=255) ttattaTGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAcc < 1:3474385/91‑1 (MQ=255) tattatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCt > 2:3220240/1‑91 (MQ=255) attatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTa > 2:1770377/1‑91 (MQ=255) attatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTa > 2:1791766/1‑91 (MQ=255) attatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTa < 2:1103061/91‑1 (MQ=255) attatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTa > 1:1704747/1‑91 (MQ=255) ttatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTAt > 2:1321480/1‑91 (MQ=255) ttatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTAt > 2:2503387/1‑91 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGt > 1:1624980/1‑91 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 1:1751435/91‑4 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 2:3179638/91‑4 (MQ=255) gTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAgg < 1:3592703/91‑1 (MQ=255) gTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAgg > 2:2672861/1‑91 (MQ=255) aaaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtg < 1:3660695/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAGTCAAACGCCCCTATGTAGgtgt < 1:2570038/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgt > 2:3545007/1‑91 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgt < 1:2623768/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtgc < 1:980206/91‑2 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtgt < 1:2551894/91‑1 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtgt < 1:955359/91‑1 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtgcgt < 1:653850/91‑4 (MQ=255) aTAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttt < 2:1930003/91‑1 (MQ=255) aGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttttt < 2:1407126/91‑1 (MQ=255) aGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttttt < 1:311230/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 2:3580600/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 1:3299118/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt > 1:1347849/1‑91 (MQ=255) tttCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttttttt < 1:3850275/91‑1 (MQ=255) tttCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttttttt < 2:3376182/91‑1 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg < 1:1475781/91‑1 (MQ=255) cGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGt > 1:3415677/1‑91 (MQ=255) cGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGt < 1:336129/91‑1 (MQ=255) gACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGtt < 2:2326647/91‑1 (MQ=255) aCCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGttt < 1:2016666/91‑1 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTAt < 2:3089752/91‑1 (MQ=255) aTTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATc > 2:2799529/1‑91 (MQ=255) aaaaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAt < 2:384649/91‑1 (MQ=255) atGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattg < 2:2046546/91‑1 (MQ=255) atGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattg > 2:1030501/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 1:416891/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 2:2564640/1‑91 (MQ=255) tgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATg > 2:2029979/1‑91 (MQ=255) gAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGt > 2:3353247/1‑91 (MQ=255) gAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGt < 2:1786490/91‑1 (MQ=255) tAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataa > 2:630601/1‑91 (MQ=255) gACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataata < 1:719897/91‑1 (MQ=255) aCGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGCTTGATGTTataataa > 2:1624505/1‑91 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTATTTTATCCAATGATTGATGTTataataat > 2:857702/1‑91 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat < 1:3182170/91‑1 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat > 1:2101824/1‑91 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat < 1:2100148/91‑1 (MQ=255) tACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATAc < 2:3739622/91‑1 (MQ=255) tACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATAc < 1:2770578/91‑1 (MQ=255) tACATAAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGAGGTTATAATAATAc < 2:822309/91‑1 (MQ=255) cATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTa < 2:2358546/91‑1 (MQ=255) tCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTaaa > 1:1144125/1‑91 (MQ=255) atgtACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAtt > 1:817017/4‑91 (MQ=255) aaaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAtt > 1:1109362/1‑91 (MQ=255) aCGTCAAGGCATGTCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTCGTa > 1:3003113/1‑91 (MQ=255) aCGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTa < 1:1491460/91‑1 (MQ=255) aCGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTa > 1:2939341/1‑91 (MQ=255) cGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTAt > 2:3322032/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc > 2:18871/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc > 1:882584/1‑91 (MQ=255) tCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCt < 2:431112/91‑1 (MQ=255) cAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCta < 2:3466190/91‑1 (MQ=255) aaGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtat < 2:1519291/91‑1 (MQ=255) aGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtata > 1:859736/1‑91 (MQ=255) ggCATATCCTAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATAGATGTTATAATAAGACTAAATTTGTATCTACaa < 2:1585262/91‑1 (MQ=255) ggCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaa > 1:1784159/1‑91 (MQ=255) cATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaa < 1:2417958/91‑1 (MQ=255) cATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaa < 2:128874/91‑1 (MQ=255) tatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaaa > 2:1378552/1‑91 (MQ=255) tCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGt < 2:724867/91‑1 (MQ=255) ccAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTa > 2:2622214/1‑91 (MQ=255) ccAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTa > 2:1018502/1‑91 (MQ=255) cAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTaa > 2:897749/1‑91 (MQ=255) cAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTaa < 2:1747474/91‑1 (MQ=255) cAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTaa < 2:2245186/91‑1 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg > 2:3271881/1‑91 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg > 1:2710798/1‑91 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 1:3706418/91‑1 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 1:3439123/91‑1 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg < 1:1747884/91‑1 (MQ=255) aTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGa < 1:230876/91‑1 (MQ=255) tCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg > 1:3008053/1‑91 (MQ=255) tCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAGGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg < 2:291658/91‑1 (MQ=255) aaaaaCACACCTACATAGGTGCGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTCTATAAAAGTAATGAg > 2:1168777/3‑91 (MQ=37) aaaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCa > 1:2825051/1‑91 (MQ=255) aaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAt > 1:227540/1‑91 (MQ=255) aaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAt > 1:1454500/1‑91 (MQ=255) aCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAtt > 1:773026/1‑91 (MQ=255) cGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAttt < 2:149814/91‑1 (MQ=255) gCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTTTATCTATAAAAAAGTAATGAGCATTtg > 2:556097/1‑91 (MQ=255) gCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTtg > 1:2216650/1‑91 (MQ=255) gCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTtg > 2:303742/1‑91 (MQ=255) | GTGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221563‑1221743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |