| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 77,984 | T→C | 8.7% | intergenic (+93/‑334) | USA300HOU_RS00350 → / → USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 77,984 | 0 | T | C | 8.7% | 666.6 / 39.9 | 219 | intergenic (+93/‑334) | USA300HOU_RS00350/USA300HOU_RS00355 | Monoacylglycerol lipase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (102/98); new base C (7/12); total (109/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 | |||||||||||
Only 100 of 243 total aligned reads displayed.
CAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTACTC > USA300TCH1516_ALE/77894‑78074 | cAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAtttt > 2:2805059/1‑91 (MQ=255)cAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGAtttt > 1:2108949/1‑91 (MQ=255) ataGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCa > 2:32792/1‑91 (MQ=255) aGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATa > 2:921458/1‑91 (MQ=255) aGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATa < 1:3359322/91‑1 (MQ=255) aGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATa < 2:3406879/91‑1 (MQ=255) aGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATa < 1:3036191/91‑1 (MQ=21) aGTACCGTGTATTTGATTAGAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑TACGATAGATTTTTTCATa < 2:3720479/91‑1 (MQ=255) gTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAg < 1:3379085/91‑1 (MQ=21) gTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAg < 2:2448723/91‑1 (MQ=21) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 1:1752749/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 1:2965726/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 1:1835152/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 2:3788390/91‑1 (MQ=255) ttCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATAATAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGc < 2:3484656/91‑1 (MQ=255) tCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCt > 1:3312864/1‑91 (MQ=255) ccGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTa > 2:1390731/1‑91 (MQ=255) cGTGTATTTGATTATAAGACATTATGAGGATATTAAAGATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAt > 2:3520393/1‑91 (MQ=255) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAg < 2:439466/86‑1 (MQ=255) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAg > 1:439466/1‑86 (MQ=255) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAtt > 1:238495/1‑91 (MQ=255) gtgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTaat < 2:2819344/91‑3 (MQ=18) tgtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAttt > 1:765055/1‑91 (MQ=255) gtATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTaatct < 1:15982/91‑5 (MQ=17) tATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTAttttt < 1:3686622/91‑1 (MQ=255) tttGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTtta > 2:3588342/1‑91 (MQ=255) tGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatt > 2:426604/1‑90 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 1:3757961/91‑1 (MQ=255) aTTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagt < 2:1149553/91‑1 (MQ=255) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagtta < 2:2727877/91‑1 (MQ=255) tataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagtta < 2:100541/91‑1 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat < 2:23568/91‑1 (MQ=255) ataAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttat < 2:3151965/91‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCAt < 1:1190687/71‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata < 2:1953272/91‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata < 2:1832985/91‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata < 1:2427367/91‑1 (MQ=255) taAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTttatagttata > 1:1753012/1‑91 (MQ=255) aGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATaga < 2:3206048/91‑1 (MQ=255) aaaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagaga > 2:1955472/1‑91 (MQ=255) aaaTTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATagaga > 1:3510646/1‑91 (MQ=255) ttATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GTCGGTAGATTTTTTCATAGCTATTTTTTATAGTTATAGAgagga < 2:2518665/91‑1 (MQ=255) ttATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATTGCTATTTTTTATAGTTATAGAgagga < 2:2217044/91‑1 (MQ=255) gAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAg > 1:2292555/1‑91 (MQ=255) aGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTTATAGCTATTTTTTATAGTTATAGAGAGGAGTAGa > 2:2678982/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 2:120217/1‑91 (MQ=255) ggATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGAc > 2:833680/1‑91 (MQ=255) tatTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGt < 1:3476304/91‑1 (MQ=255) atTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTc < 2:751199/91‑1 (MQ=255) ttAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTcc > 1:624948/1‑91 (MQ=255) ttAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTcc > 2:1291217/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 1:2607304/1‑91 (MQ=255) cATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGAct > 2:1856627/1‑91 (MQ=255) aTACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGActc < 1:3297641/91‑1 (MQ=255) aTACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGActc < 2:1972868/91‑1 (MQ=255) tACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGActct > 1:2623302/1‑91 (MQ=255) cTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTg < 1:1427435/91‑1 (MQ=255) tAAGAGTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTgg < 2:3569031/91‑1 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 2:1367004/1‑91 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 1:1158487/1‑91 (MQ=255) aaGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGa > 1:3085584/1‑91 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 2:2138056/91‑1 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 1:2126401/91‑1 (MQ=255) aGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAt < 2:3543353/91‑1 (MQ=255) aaatAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtt > 2:563238/4‑91 (MQ=17) aatAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt > 2:2673880/3‑91 (MQ=17) aTTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAttt < 1:2812970/91‑1 (MQ=255) ttAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt < 2:2300456/91‑1 (MQ=255) atAGCTATGAAAAAATCTATCGTC‑ATAGATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGAtttt > 1:536936/2‑91 (MQ=17) cTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAAt > 1:3652431/1‑91 (MQ=255) tATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATc < 1:1072397/91‑1 (MQ=255) aTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATcc > 2:903309/1‑91 (MQ=255) aTGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATcc > 1:264917/1‑91 (MQ=255) tGAAGAAATCTAT‑GACGNTAGATNTTTTCATAGCTATTTTTTANAGTTATAGAGAGGAGNAGACTGTCCAGACTCTTGGATTTTAAATNCg < 2:1020852/91‑1 (MQ=17) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:838269/91‑1 (MQ=255) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:2493558/91‑1 (MQ=255) tGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCg < 1:838508/91‑1 (MQ=255) gaagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGt > 1:100186/1‑91 (MQ=255) aagaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATACGTa < 2:1099938/91‑1 (MQ=255) agaaATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaa < 2:3629105/91‑1 (MQ=255) agaaATCTAT‑GACGATAGATTTTCTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaa < 2:3613280/91‑1 (MQ=255) tCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaa > 1:3484791/1‑91 (MQ=255) cTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaaa > 1:3397792/1‑91 (MQ=255) tAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTaaaaaaaaa < 1:932701/91‑2 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 2:3050412/1‑91 (MQ=255) aT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACa > 2:3881373/1‑91 (MQ=255) t‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACaa > 1:3729901/1‑91 (MQ=255) gACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAg < 2:1644069/91‑1 (MQ=255) gACAATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAATAAACAAg > 2:3441415/1‑91 (MQ=255) aTAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAg > 1:1102760/1‑91 (MQ=255) gATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCtt < 1:1869136/91‑1 (MQ=255) gATTTCTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCtt > 1:2281050/1‑91 (MQ=255) tttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTAc < 1:2285997/91‑1 (MQ=255) ttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGTCTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTAct < 2:2996764/91‑1 (MQ=255) ttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTAct < 1:1371029/91‑1 (MQ=255) ttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTAct > 1:2300844/1‑91 (MQ=255) ttttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTAct > 2:1814459/1‑91 (MQ=255) tttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTActc > 2:52751/1‑91 (MQ=255) tttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTActc < 2:3320425/91‑1 (MQ=255) tttCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGCCCAGACTCTTGGATTTTAAATCCGTACAAAAAACAAGTCAGCTTTActc > 2:2944941/1‑91 (MQ=255) | CAGTATAGTTCCGTGTATTTGATTATAAGAAATTATGAGGATATTAAACATACTAAGATTAGCTATGAAGAAATCTAT‑GACGATAGATTTTTTCATAGCTATTTTTTATAGTTATAGAGAGGAGTAGACTGTCCAGACTCTTGGATTTTAAATCCGTAAAAAAAACAAGTCAGCTTTACTC > USA300TCH1516_ALE/77894‑78074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |