| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,362,249 | A→T | 5.8% | intergenic (‑181/+37) | USA300TCH1516_01271 ← / ← lysP_1 | hypothetical protein/Lysine‑specific permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,362,249 | 0 | A | T | 5.8% | 761.5 / 24.6 | 223 | intergenic (‑181/+37) | USA300TCH1516_01271/lysP_1 | hypothetical protein/Lysine‑specific permease |
| Reads supporting (aligned to +/- strand): ref base A (136/73); new base T (7/6); total (144/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
AATATAAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCTTTA > USA300TCH1516_ALE/1362159‑1362338 | aaTATAAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCta < 1:2931607/91‑1 (MQ=255)aaTATAAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCta > 1:1236226/1‑91 (MQ=255) atatAAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATCAAAAAGCGGCAAATGCtat > 2:1779250/1‑91 (MQ=255) ataAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAGATGCTTTAg < 2:2108499/91‑1 (MQ=255) ataAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAg < 1:2228468/91‑1 (MQ=255) taAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGa > 1:1006220/1‑91 (MQ=255) taAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGa > 1:1696879/1‑91 (MQ=255) aaaCAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGAt < 1:390301/91‑1 (MQ=255) aaCAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATa > 1:16561/1‑91 (MQ=255) aCAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATaa > 1:3587693/1‑91 (MQ=255) aGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATc < 2:1721778/91‑1 (MQ=255) gAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCt > 2:1518154/1‑91 (MQ=255) aaTACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTa < 2:2045588/91‑1 (MQ=255) aaTACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTa > 1:1289295/1‑91 (MQ=255) tACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTaaa < 2:402571/91‑1 (MQ=255) aCTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAg < 2:649615/91‑1 (MQ=255) aCTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAg > 1:1084685/1‑91 (MQ=255) cTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGc > 1:2853872/1‑91 (MQ=255) tAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCa < 1:948056/91‑1 (MQ=255) tAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCa > 2:1422707/1‑91 (MQ=255) tAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCa > 1:2743845/1‑91 (MQ=255) aGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCAt < 2:2276934/91‑1 (MQ=255) aGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCAt > 1:2984944/1‑91 (MQ=255) gTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAGATGCTTTAGATTATCTATAGCAtt < 2:633879/91‑2 (MQ=37) ttAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAGATGCTTTAGATTATCTATAGCAttt < 1:3401480/91‑3 (MQ=37) ttAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCt < 2:471845/91‑1 (MQ=255) tAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTg > 2:2803868/1‑91 (MQ=255) aaTACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGc > 2:2482431/1‑91 (MQ=255) atatACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGcc < 1:3496356/91‑1 (MQ=255) cacTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTa > 1:2480578/1‑91 (MQ=255) acTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTAt < 1:1754084/91‑1 (MQ=255) cTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATg > 2:3638003/1‑91 (MQ=255) tttATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATga > 1:789358/1‑91 (MQ=255) tttATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATga > 1:144792/1‑91 (MQ=255) ttATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATgag < 1:3458671/91‑1 (MQ=255) ataCTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGaa < 2:851468/91‑1 (MQ=255) cTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAattt > 2:1220056/1‑91 (MQ=255) cTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAattt > 2:2160610/1‑91 (MQ=255) tAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAattta < 2:1827310/91‑1 (MQ=255) tAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAattta < 1:407948/91‑1 (MQ=255) tAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAattta > 1:640457/1‑91 (MQ=255) gAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAatttatt > 1:307741/1‑91 (MQ=255) gAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAatttatt > 2:2341439/1‑91 (MQ=255) aGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAatttatttattt < 1:2327810/91‑1 (MQ=255) gATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTAtttt < 2:3567382/91‑1 (MQ=255) atatTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTAttttt > 1:1259360/1‑91 (MQ=255) tatTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTg < 1:100712/91‑1 (MQ=255) atTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGa > 2:2819855/1‑91 (MQ=255) atTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGa > 1:3838457/1‑91 (MQ=255) atTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGa > 2:2738061/1‑91 (MQ=255) atTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGa > 2:2735850/1‑91 (MQ=255) tAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGAtt < 1:72181/91‑1 (MQ=255) tAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGAtt < 1:3647816/91‑1 (MQ=255) aaGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGt > 2:2048484/1‑91 (MQ=255) aGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTc > 2:2300048/1‑91 (MQ=255) gTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCa > 1:230658/1‑91 (MQ=255) gTATATCTGCTGTACACCTGTAGGAAGCGGCAAATGCTATAGATAATCTGAAGCATCTGTCGTATGAGAATTTATTTATTTTTGATTGTCa < 2:2955273/91‑1 (MQ=255) tataTCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCAt < 1:2362351/91‑1 (MQ=255) tataTCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCAt < 1:488327/91‑1 (MQ=255) atatCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATa < 1:1482032/91‑1 (MQ=255) atatCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATa < 2:483489/91‑1 (MQ=255) tatCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATaa > 2:1266352/1‑91 (MQ=255) atCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAAt < 1:2092915/91‑1 (MQ=255) tCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATc > 1:767355/1‑91 (MQ=255) tGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCgt > 2:3033030/1‑91 (MQ=255) tGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCgt > 2:2878645/1‑91 (MQ=255) cTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCgtgt > 1:1719141/1‑91 (MQ=255) tttACACCATTAAAAAGCGGCAAATGCTATAGGTAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGtgtg < 1:3301162/91‑1 (MQ=255) tttACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGtgtg < 2:1310704/91‑1 (MQ=255) tttACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGtgtg < 2:1189216/91‑1 (MQ=255) tACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGt > 2:3666030/1‑91 (MQ=255) acacCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCAAAATCGTGTGGtt > 2:3232219/1‑91 (MQ=255) acacCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAA‑TTATTTATTTTTGATTGTCATAATCGTGTGGttt > 1:460026/1‑91 (MQ=255) cacCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGttt > 2:1490017/1‑91 (MQ=255) acCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGtttt > 2:100520/1‑91 (MQ=255) aTTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTaaa > 2:669099/1‑91 (MQ=255) aTTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTaaa > 1:1619695/1‑91 (MQ=255) ttAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaat > 1:1902114/1‑91 (MQ=255) aaaaaGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaatta > 1:2042706/1‑91 (MQ=255) aaaGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaattaat < 1:3557605/91‑1 (MQ=255) aaaGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaattaat < 1:682921/91‑1 (MQ=255) aaGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaattaatt > 2:2662818/1‑91 (MQ=255) aaGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAaattaatt > 2:3702802/1‑91 (MQ=255) aGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTg < 2:2410860/91‑1 (MQ=255) aGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTg < 1:3232219/91‑1 (MQ=255) gCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCGTAATCGTGTGGTTTTAAATTAATTGt > 1:1036587/1‑91 (MQ=255) gCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGt > 2:3308369/1‑91 (MQ=255) gCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGt > 1:237531/1‑91 (MQ=255) cGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGtt > 1:3190660/1‑91 (MQ=255) ggCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGttt > 2:1092983/1‑91 (MQ=255) cAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCt > 1:268453/1‑91 (MQ=255) agaTGCTTTAGATTATCTATAGCATTTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTa > 1:466537/3‑91 (MQ=37) agaTGCTTTAGATTATCTATAGCATTTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTa > 2:768959/3‑91 (MQ=37) aaaTGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTa > 1:1140974/1‑91 (MQ=255) gaTGCTTTAGATTATCTATAGCATTTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTTATTGTTTCTAg > 2:3193275/2‑91 (MQ=37) aTGCTTTAGATTATCTATAGCATTTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGc > 2:1320183/1‑91 (MQ=38) tGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCt > 1:214251/1‑91 (MQ=255) gCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCtt < 1:840752/91‑1 (MQ=255) tataGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCTTTa < 1:708314/91‑1 (MQ=255) tataGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCTTTa < 2:886480/91‑1 (MQ=255) | AATATAAACAGAATACTAGTTAATACACTTTATACTAGAAAAAGATATTAAAGTATATCTGCTTTACACCATTAAAAAGCGGCAAATGCTATAGATAATCTAAAGCATCTGCCGTATGAGAATTTATTTATTTTTGATTGTCATAATCGTGTGGTTTTAAATTAATTGTTTCTAGCTTTA > USA300TCH1516_ALE/1362159‑1362338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |