| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,447,045 | T→A | 6.1% | I64F (ATC→TTC) | cobT ← | Aerobic cobaltochelatase subunit CobT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,447,045 | 0 | T | A | 6.1% | 779.5 / 30.1 | 230 | I64F (ATC→TTC) | cobT | Aerobic cobaltochelatase subunit CobT |
| Reads supporting (aligned to +/- strand): ref base T (109/107); new base A (11/3); total (120/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.32e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
Only 100 of 238 total aligned reads displayed.
CTTGTACTACTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACTTGTGT > USA300TCH1516_ALE/1446955‑1447135 | cTTGTACTACTCCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGat < 2:2593164/91‑1 (MQ=255) ttGTACTACTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGata < 1:2514016/91‑1 (MQ=255) tGTACTACTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATATCGaaat < 1:2886531/91‑1 (MQ=255) gTACTACTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATg > 1:408253/1‑91 (MQ=255) tactacTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATgg < 1:3540031/91‑1 (MQ=255) actactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGc < 1:111659/91‑1 (MQ=255) actactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGc < 2:64702/91‑1 (MQ=255) actactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATATCGAAATGGc < 1:69033/91‑1 (MQ=255) tactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCtt < 2:10330/91‑1 (MQ=255) tactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCtt < 2:1430392/91‑1 (MQ=255) tactTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCtt < 2:2613250/91‑1 (MQ=255) actTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTg < 1:2760317/91‑1 (MQ=255) actTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTg > 2:229047/1‑91 (MQ=255) ttCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGt < 2:204312/91‑1 (MQ=255) tCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATCTCGATATGGCTTGGTc > 2:2983091/1‑91 (MQ=255) aTTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGa < 1:3212613/91‑1 (MQ=255) tttACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTcaca < 1:792741/91‑4 (MQ=255) tACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGAtgt < 1:1620920/91‑1 (MQ=255) aCAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGAtgtg < 2:831869/91‑1 (MQ=255) aCAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGAtgtg < 2:378727/91‑1 (MQ=255) cAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGa > 2:3694684/1‑91 (MQ=255) aaTTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGAc > 2:1464705/1‑91 (MQ=255) aTTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGAcc > 2:1130185/1‑91 (MQ=255) tttGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCGGCCATTTCGATATGGCTTGGTCGATGTGACCa < 2:3810666/91‑1 (MQ=255) tttGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCa < 1:3694384/91‑1 (MQ=255) ttGTACATCCATCATATGATAACCGTAAGGAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCaa < 1:3114696/91‑1 (MQ=255) ttGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCaa < 2:2097129/91‑1 (MQ=255) tGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCaaa > 2:3547475/1‑91 (MQ=255) gTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCaaaa < 1:1607183/91‑1 (MQ=255) tACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAAc > 1:1222799/1‑91 (MQ=255) tACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAAc < 2:1201751/91‑1 (MQ=255) aCATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAAcc > 2:3652413/1‑91 (MQ=255) catccatcATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCa > 2:2105587/1‑91 (MQ=255) atccatcATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCaa > 2:1709239/1‑91 (MQ=255) atcatATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCg < 1:1710477/91‑1 (MQ=255) tcatATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGt > 1:2167527/1‑91 (MQ=255) tGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCa < 1:3846697/91‑1 (MQ=255) tGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCa < 1:3846888/91‑1 (MQ=255) gATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCaa < 2:2923492/91‑1 (MQ=255) aTAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCaaa > 2:1231390/1‑91 (MQ=255) tAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCaaaa > 1:516542/1‑91 (MQ=255) aaCCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAAc > 2:2065192/1‑91 (MQ=255) ccGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAt < 2:1421525/91‑1 (MQ=255) ccGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAt < 1:1102295/91‑1 (MQ=255) gTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAttt < 1:1454780/91‑1 (MQ=255) gTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAttt < 1:3359447/91‑1 (MQ=255) gTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAtt > 2:2451327/1‑90 (MQ=255) aaGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTg < 1:194824/91‑1 (MQ=255) agcagcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGa < 1:2000580/91‑1 (MQ=255) agcagcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGa > 2:2820252/1‑91 (MQ=255) agcagcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGa > 2:3381451/1‑91 (MQ=255) agcagcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGa < 2:1545836/91‑1 (MQ=255) gcagcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGaa > 2:3152747/1‑91 (MQ=255) agcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACa < 1:3783216/91‑1 (MQ=255) gcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAg > 1:2059779/1‑91 (MQ=255) gcTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAg > 2:3096836/1‑91 (MQ=255) cTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAgg > 1:1411478/1‑91 (MQ=255) taacatatcaTCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGa < 1:2445567/91‑1 (MQ=255) taacataacaTCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGa < 2:3282115/91‑1 (MQ=255) taacataacaTCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGa > 1:3632285/1‑91 (MQ=255) aacataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGAt < 1:1801852/91‑1 (MQ=255) aacataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGAt > 1:2998650/1‑91 (MQ=255) acataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGAtt < 2:1978857/91‑1 (MQ=255) ataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACAtt < 1:1556513/77‑1 (MQ=255) ataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATtat > 2:3781230/1‑91 (MQ=255) ataacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATtat > 2:5561/1‑91 (MQ=255) taacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATtata > 2:240648/1‑91 (MQ=255) taacatCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATtata > 1:2116223/1‑91 (MQ=255) catCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTa > 1:1256171/1‑91 (MQ=255) atCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGGaa < 1:739875/91‑1 (MQ=255) tCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAg < 2:2746333/91‑1 (MQ=255) cTGTTTTTAAACCAGCCATTTCGATATTGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAgg < 2:1618278/91‑1 (MQ=255) gTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGa < 2:516542/91‑1 (MQ=255) tttttAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGaa > 2:582594/1‑91 (MQ=255) ttttAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAAt < 1:837500/91‑1 (MQ=255) ttAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAAttt < 2:1950288/91‑1 (MQ=255) ttAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAAttt < 2:3216429/91‑1 (MQ=255) aaCCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTg < 2:46195/91‑1 (MQ=255) ccaaGCCATATCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTgg > 1:935706/4‑91 (MQ=255) aCCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTgg < 2:1827112/91‑1 (MQ=255) aCCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTgg > 1:2747957/1‑91 (MQ=255) ccAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGa > 2:3706976/1‑91 (MQ=255) cAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAAGCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTCTGGAt > 1:3612747/1‑91 (MQ=255) cAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAt > 1:886723/1‑91 (MQ=255) cAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAt > 1:2274701/1‑91 (MQ=255) gCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAttt > 1:3390498/1‑91 (MQ=255) gCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAttt > 1:3176562/1‑91 (MQ=255) gCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAttt > 2:1768854/1‑91 (MQ=255) ccATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAtttt > 1:2247556/1‑91 (MQ=255) ccATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAtttt < 1:397287/91‑1 (MQ=255) ccATATCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGAtttt > 1:3529899/1‑91 (MQ=255) cATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTa > 1:2745425/1‑91 (MQ=255) cATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTa > 2:2206841/1‑91 (MQ=255) cATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTa > 1:1234857/1‑91 (MQ=255) tttCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAAc > 2:460417/1‑91 (MQ=255) tatCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAAc > 1:1066243/3‑91 (MQ=255) atCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACt > 1:2487798/2‑91 (MQ=255) tCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACtt < 1:1786886/91‑1 (MQ=255) tCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACtt > 1:28636/1‑91 (MQ=255) tCGAAATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACtt > 2:2172222/1‑91 (MQ=255) | CTTGTACTACTTCATTTACAATTTGTACATCCATCATATGATAACCGTAAGCAGCTAACATAACATCTGTTTTTAAACCAGCCATTTCGATATGGCTTGGTCGATGTGACCAAAACCAACTCGTAATCAAAACATTTTGAACAGGATTATAGTAAGGGAATTTTTGGATTTTAACTTGTGT > USA300TCH1516_ALE/1446955‑1447135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |