| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 109,958 | G→A | 7.4% | intergenic (+37/‑184) | plc → / → USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 109,958 | 0 | G | A | 7.4% | 801.1 / 33.8 | 244 | intergenic (+37/‑184) | plc/USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (138/88); new base A (8/10); total (146/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
ACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAA > USA300TCH1516_ALE/109868‑110048 | aCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAg < 2:590314/91‑1 (MQ=255) cGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGt > 2:1716265/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt > 2:3281183/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt > 1:1222115/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt > 1:2794383/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt < 1:1580453/91‑1 (MQ=255) ccTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGAt > 1:3421090/1‑91 (MQ=255) ccTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGAt < 1:1019218/91‑1 (MQ=255) tGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTc > 2:2657241/1‑91 (MQ=255) tGGATATGATGATATCGTAAGTGAAATCATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTc > 2:813613/1‑91 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt > 1:889946/1‑91 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt < 1:2240531/91‑1 (MQ=255) gATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTa > 2:1049376/1‑91 (MQ=255) gATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTa > 2:3485449/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:197668/91‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 2:2286862/91‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 2:1122688/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:82214/91‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:505676/91‑1 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat < 2:1354152/91‑1 (MQ=255) atgatgATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatt < 2:3135759/91‑1 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 2:3459880/1‑91 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAATTAGAATCTaacta < 2:1788702/91‑4 (MQ=39) gatgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattat > 1:2251700/1‑91 (MQ=255) tgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAATTAGAATCTAACTAttt < 1:1741823/91‑1 (MQ=38) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGCTTCAATAATGATAATAAGACGAGTA‑TGGAAATAGTTAGATTCTAATTATTTTc > 1:3611363/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:2185703/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:2185604/1‑91 (MQ=255) tatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCa > 2:1030744/1‑91 (MQ=255) atCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCa < 1:563921/91‑1 (MQ=25) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCat < 2:981106/91‑2 (MQ=25) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 1:1464661/1‑91 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact < 2:3323073/91‑1 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAAGAGTTAGATTCTAATTATTTTCact > 2:3600026/1‑91 (MQ=255) cGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTGAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCacta > 2:3417765/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac < 1:2086622/91‑1 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc < 1:761959/91‑1 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:2430708/1‑91 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGtc < 1:2886124/91‑2 (MQ=18) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt < 2:352106/91‑1 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:3483792/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:3442096/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 2:3439882/1‑91 (MQ=255) aTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTa > 2:400597/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:3687795/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:3170895/1‑91 (MQ=255) tagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAtttt < 1:3466911/91‑1 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTa < 2:2897098/56‑1 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTa > 1:2897098/1‑56 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:1283020/1‑91 (MQ=255) atagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaa > 1:1366190/1‑91 (MQ=255) gTAATAAATAAGGATTCAATAATGATATTAAGACGGGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAAt > 2:1275124/1‑91 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 2:2346258/91‑1 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 1:2067066/91‑1 (MQ=255) ataaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAg < 2:2339483/91‑1 (MQ=255) aaataaGGATTCAATAATGCTATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGta > 2:1228587/1‑91 (MQ=255) aataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaa > 2:3128958/1‑91 (MQ=255) taaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaata > 1:2471739/1‑91 (MQ=255) aaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaataa < 2:1464661/91‑1 (MQ=255) aaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaataa > 2:3069551/1‑91 (MQ=255) aGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTaataat > 2:2027631/1‑91 (MQ=255) ggATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAAtt < 1:1299028/91‑1 (MQ=255) ttCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaa > 1:944400/1‑91 (MQ=255) tCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaac > 2:2933603/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:2325943/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat < 2:2834566/91‑1 (MQ=255) taatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAata < 1:190063/91‑1 (MQ=255) aatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAatat < 1:3246116/91‑1 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 2:1976804/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:2261654/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta > 2:2456411/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta < 1:10469/91‑1 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta < 1:2091880/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAATATAAGTAATAATTCAACAATATTATaaa > 2:3790383/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 2:2749666/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 2:2844137/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:3592554/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2952339/1‑91 (MQ=255) tAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAtt > 2:2078086/1‑91 (MQ=255) aaaaCGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTg > 2:2013453/4‑91 (MQ=17) aaGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTg > 2:2134357/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa > 1:1872787/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACACGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 2:147880/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 2:565645/91‑1 (MQ=255) aCGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc < 2:2505083/91‑1 (MQ=255) cGAGTAGTGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:649012/1‑91 (MQ=25) cGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACa < 1:3750243/91‑1 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa > 1:2657712/1‑91 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa > 1:2907329/1‑91 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa < 2:504737/91‑1 (MQ=255) gTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:957360/1‑67 (MQ=255) agtGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 2:3789574/3‑91 (MQ=25) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 1:2598789/1‑91 (MQ=255) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 1:3047/1‑91 (MQ=255) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTCGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 1:3078476/1‑91 (MQ=255) gAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtt > 1:3796665/1‑91 (MQ=255) aaaaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgttt < 2:2179898/91‑1 (MQ=255) aaaTAGTTAGATTCTAGTTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttg < 2:3706291/91‑1 (MQ=255) tAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGa > 1:1415994/1‑91 (MQ=255) gTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaaa > 2:3008841/1‑91 (MQ=255) | ACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAA > USA300TCH1516_ALE/109868‑110048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |