| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 109,964 | T→A | 7.2% | intergenic (+43/‑178) | plc → / → USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 109,964 | 0 | T | A | 7.2% | 815.2 / 38.1 | 245 | intergenic (+43/‑178) | plc/USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (139/88); new base A (9/9); total (148/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.03e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
CCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTTG > USA300TCH1516_ALE/109874‑110054 | ccTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGAt < 1:1019218/91‑1 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt > 1:889946/1‑91 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt < 2:903297/91‑1 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt > 2:3474287/1‑91 (MQ=255) ggATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCt < 1:2240531/91‑1 (MQ=255) gATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTa > 2:1049376/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:1272728/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 2:3759735/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:505676/91‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:984693/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 2:1475743/91‑1 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 2:2928537/1‑91 (MQ=255) atgatgATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatt < 2:3135759/91‑1 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 2:3125838/1‑91 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta < 2:2479685/91‑1 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 1:1476541/1‑91 (MQ=255) gatgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattat > 1:2251700/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGCTTCAATAATGATAATAAGACGAGTA‑TGGAAATAGTTAGATTCTAATTATTTTc > 1:3611363/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc < 1:140665/91‑1 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:2185604/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:2185703/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTAGTTTc > 1:3233958/1‑91 (MQ=255) atCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCa < 1:563804/91‑1 (MQ=25) tCGTCAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 1:3060188/1‑91 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCat < 2:2019299/91‑2 (MQ=25) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 1:1464661/1‑91 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 2:2086757/1‑91 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATGCAATAATGATAGTAAGACGAGTA‑TGAAAATAATTAGAATCTAACTATTTTCata < 2:2707098/91‑3 (MQ=37) cGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCacta < 2:584030/91‑1 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:1918363/1‑91 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:2430708/1‑91 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg < 1:3026992/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGtc < 1:2886124/91‑2 (MQ=18) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt < 2:354977/91‑1 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGtct < 2:3687486/91‑3 (MQ=17) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:1289615/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATATTGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:3442348/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 2:3439924/1‑91 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 2:551104/91‑1 (MQ=255) aaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttttt < 2:1099650/91‑1 (MQ=255) aaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttttt > 1:787583/1‑91 (MQ=255) aTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTa > 1:3510075/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:3687795/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:3170837/1‑91 (MQ=255) tagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAtttt < 2:1577444/91‑1 (MQ=255) tagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAtttt > 1:343353/1‑91 (MQ=255) atagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaa > 1:1366190/1‑91 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 2:2268597/91‑1 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 2:2345717/91‑1 (MQ=255) ataaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAg < 2:2339483/91‑1 (MQ=255) aataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaa < 1:2645579/91‑1 (MQ=255) ataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaat > 1:2732356/1‑91 (MQ=255) taaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaata < 2:1222115/91‑1 (MQ=255) aaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaataa > 2:3069551/1‑91 (MQ=255) aGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTaataat > 2:2027631/1‑91 (MQ=255) gATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:1730196/1‑91 (MQ=255) aTTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTca > 1:202786/1‑91 (MQ=255) tCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaac > 2:2934064/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat < 2:2834566/91‑1 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:2325943/1‑91 (MQ=255) aatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAatat > 1:2088495/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 2:1292758/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 2:1976804/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 2:406091/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:2261654/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAATAAtatta > 2:3437344/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta > 2:2456411/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta < 1:10469/91‑1 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta < 1:3470479/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:3592554/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 2:2844137/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:207422/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 2:2749666/1‑91 (MQ=255) ttAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAt > 1:3714006/1‑91 (MQ=255) ttAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAt > 2:3879592/1‑91 (MQ=255) aaGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTg > 2:2134357/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa > 1:938853/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa > 1:1873257/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATCATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTACAAATTGaa > 2:3379483/1‑91 (MQ=255) aCGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:2557722/1‑91 (MQ=18) aCGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc < 2:3510075/91‑1 (MQ=255) cGAGTAGTGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:649012/1‑91 (MQ=25) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 2:2189661/91‑1 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa > 2:1381102/1‑91 (MQ=255) gTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:957360/1‑67 (MQ=255) gTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAt > 1:1753041/1‑91 (MQ=255) agtGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:3344496/3‑91 (MQ=37) agtGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 2:3789586/3‑91 (MQ=25) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 2:319548/1‑91 (MQ=255) gAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtt > 1:3796188/1‑91 (MQ=255) aaaaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgttt < 2:194533/91‑1 (MQ=255) aaaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttg > 2:1250468/1‑91 (MQ=255) aaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttgt < 1:2928537/91‑1 (MQ=255) aaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttgt > 1:28980/1‑91 (MQ=255) ttAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAt > 2:3394178/1‑91 (MQ=255) ttAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGTAAATAAGTAATAATTCAACAATATTATAAATTGTACAGTTTGTTTGTGAAAt > 2:2640056/1‑91 (MQ=255) aGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAttt > 1:2396314/1‑91 (MQ=255) aGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAAGAATTCAACAATATTATAAATTGAACAGATGGTTTGTGAAAttt > 1:3877018/1‑91 (MQ=255) ttCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTTg < 1:714191/91‑1 (MQ=255) ttCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTTg > 1:2150211/1‑91 (MQ=255) | CCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTTG > USA300TCH1516_ALE/109874‑110054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |