| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,962,395 | A→G | 5.3% | intergenic (‑284/+188) | USA300TCH1516_01825 ← / ← ydeN | tRNA‑Met/Putative hydrolase YdeN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,962,395 | 0 | A | G | 5.3% | 613.6 / 16.1 | 189 | intergenic (‑284/+188) | USA300TCH1516_01825/ydeN | tRNA‑Met/Putative hydrolase YdeN |
| Reads supporting (aligned to +/- strand): ref base A (90/89); new base G (2/8); total (92/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
Only 100 of 197 total aligned reads displayed.
GTAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAC > USA300TCH1516_ALE/1962305‑1962485 | aaaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGt < 1:268842/91‑1 (MQ=255) aaaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGt < 1:1890670/91‑1 (MQ=255) aaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGtt < 2:2201795/91‑1 (MQ=255) aaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGtt < 2:3404331/91‑1 (MQ=255) aaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGtt < 2:2612272/91‑1 (MQ=255) cGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTa > 1:828448/1‑91 (MQ=255) gCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTAc < 1:2814113/91‑1 (MQ=255) cttcttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACa > 2:901923/1‑91 (MQ=255) cttcttATTCCCTTTTATCATATAAGTGTCCAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACa > 2:353186/1‑91 (MQ=255) ttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGc < 1:53073/91‑1 (MQ=255) tATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGcc < 1:3237667/91‑1 (MQ=255) aTTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGCGTTGTAAACTTTATAACTCCt < 1:3649058/91‑1 (MQ=37) cTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATAcc < 1:889376/91‑1 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGCGTTGTAAACTTTATAACTCCTATACCt < 1:1662840/91‑1 (MQ=21) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt < 1:78930/91‑1 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt > 2:895722/1‑91 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt < 1:3353749/91‑1 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt > 2:2458140/1‑91 (MQ=255) tttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCtt > 1:2440161/1‑91 (MQ=255) aTCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTg < 1:2282680/91‑1 (MQ=255) tCATATAAGTGTCTAGTAGTTGTCAGGAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa < 2:3361844/91‑1 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa < 2:3066117/91‑1 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa < 2:3242570/91‑1 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGCTATAAAGTTTACAACGCCTATACCTTCTGa < 1:353186/91‑1 (MQ=255) cATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa > 2:1581162/1‑91 (MQ=255) cATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa < 2:2512491/91‑1 (MQ=255) atatAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaaa < 2:153670/91‑1 (MQ=255) taAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAg < 2:828448/91‑1 (MQ=255) taAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAg < 1:3212753/91‑1 (MQ=255) aaGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGa < 1:3597221/91‑1 (MQ=255) aGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGaa < 1:2622879/91‑1 (MQ=255) gtgtCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGaaa < 1:2774549/91‑1 (MQ=255) gtgtCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGaaa < 1:2145355/91‑1 (MQ=255) tgtCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAAt > 1:952559/1‑91 (MQ=255) tCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATta > 2:804315/1‑91 (MQ=255) tCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATta > 2:2364201/1‑91 (MQ=255) tCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATta > 1:3562682/1‑91 (MQ=255) tCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATAAAAAATAAAAAAGAAATta < 2:2953024/91‑1 (MQ=255) tAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATtata > 2:1951822/1‑91 (MQ=255) tAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATtata < 1:2066158/91‑1 (MQ=255) tAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATtata > 2:2765016/1‑91 (MQ=255) tAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATtata < 1:1863584/91‑1 (MQ=255) gTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGc > 2:2677903/1‑91 (MQ=255) tGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCtt > 2:950256/1‑91 (MQ=255) tGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAACTATAAAAGCtt > 1:3518585/1‑91 (MQ=255) tCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGt > 1:3008052/1‑91 (MQ=255) tCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGt < 1:1365889/91‑1 (MQ=255) tCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGt > 1:990765/1‑91 (MQ=255) tCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGt > 1:701314/1‑91 (MQ=255) cATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGtt > 1:1502897/1‑91 (MQ=255) cATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGtt > 2:3192152/1‑91 (MQ=255) cATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGtt < 2:1844425/91‑1 (MQ=255) aTAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTa > 2:1815436/1‑91 (MQ=255) aaaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTaca < 1:486326/91‑1 (MQ=255) aaaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTaca > 2:121856/1‑91 (MQ=255) aaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTacac > 1:713870/1‑91 (MQ=255) aaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTacac < 1:1481430/91‑1 (MQ=255) aTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACAcc < 2:518108/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 2:1601477/91‑1 (MQ=255) aGTGTAAAAGCAAATAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 2:413356/91‑1 (MQ=255) gtgtTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCa < 1:392930/91‑1 (MQ=255) ttAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCatat > 1:380075/1‑91 (MQ=255) ttAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCatat > 1:380665/1‑91 (MQ=255) ttAAAGCATTTAAAAAGGTATAGGAGATATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCatat > 1:380317/1‑91 (MQ=255) aaGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCt > 1:1568998/1‑91 (MQ=255) aGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCtt < 1:1789238/91‑1 (MQ=255) tttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcag > 1:112804/1‑91 (MQ=255) tttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcag > 1:1289455/1‑91 (MQ=255) ttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagt > 1:2907889/1‑91 (MQ=255) ttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagt > 2:930280/1‑91 (MQ=255) aaaaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtcag > 1:3127184/1‑91 (MQ=255) aaaaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtcag > 2:3750265/1‑91 (MQ=255) aaaaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagacag > 1:3127555/1‑91 (MQ=255) aaaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGc < 1:1183217/91‑1 (MQ=255) aaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtc > 1:1996088/1‑87 (MQ=255) aaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtc < 2:1996088/87‑1 (MQ=255) aGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGa > 2:2322971/1‑91 (MQ=255) ggTATAGGCGTTGTAAACTTTATAACTCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGAc > 2:3476947/1‑91 (MQ=25) ggTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGAc > 2:874322/1‑91 (MQ=255) ggTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGAc > 2:3285803/1‑91 (MQ=255) ggTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGAc < 2:1468994/91‑1 (MQ=255) gTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACt > 2:3010806/1‑91 (MQ=255) gTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACt < 2:1050931/91‑1 (MQ=255) tataGGCGTTGTAAACTTTATAACTCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTa > 1:2220092/1‑91 (MQ=25) tataGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTa < 2:3656443/91‑1 (MQ=255) taGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTAcc > 1:2106271/1‑91 (MQ=255) taGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTAcc > 2:2648817/1‑91 (MQ=255) taGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTAcc < 1:2861512/91‑1 (MQ=255) aGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCa > 1:3374009/1‑91 (MQ=255) ggAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCaa > 1:384042/1‑91 (MQ=255) ggAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCaa > 1:2495970/1‑91 (MQ=255) ggAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCaa > 1:3454837/1‑91 (MQ=255) gAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAat < 2:444321/91‑1 (MQ=255) gAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAat < 2:662365/91‑1 (MQ=255) gAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAat < 1:1011914/91‑1 (MQ=255) gTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAatat < 2:3790804/91‑1 (MQ=255) ttATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAAtata < 1:1743905/91‑1 (MQ=255) ataAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAc < 2:2802262/91‑1 (MQ=255) ataAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAc < 2:2802130/91‑1 (MQ=255) ataAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAc > 1:1353575/1‑91 (MQ=255) | GTAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAC > USA300TCH1516_ALE/1962305‑1962485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |