| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,145,549 | T→G | 5.6% | intergenic (+83/‑278) | USA300HOU_RS10945 → / → USA300HOU_RS10950 | hypothetical protein/2‑oxoglutaramate amidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,145,549 | 0 | T | G | 5.6% | 636.6 / 21.8 | 190 | intergenic (+83/‑278) | USA300HOU_RS10945/USA300HOU_RS10950 | hypothetical protein/2‑oxoglutaramate amidase |
| Reads supporting (aligned to +/- strand): ref base T (88/91); new base G (7/4); total (95/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 211 total aligned reads displayed.
AAAAATAATCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAG > USA300TCH1516_ALE/2145459‑2145639 | aaaaTAATCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCgctg > 1:1459520/1‑91 (MQ=255) aataatCAATATATTGTTAGGAATGGTACAGAAATGATAAAGGATCATTAGTTATGCATTATGTAGTAGTTCTTACACATTAGCCgctgct < 2:530457/91‑1 (MQ=255) aataatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCgctgct < 1:2111770/91‑1 (MQ=255) ataatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTGCACATTAGCAGCGGCTa < 2:1523034/91‑1 (MQ=37) ataatCAATATATTATTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTa > 2:3294386/1‑91 (MQ=255) taatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTaa > 2:21006/1‑91 (MQ=255) aatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAt < 1:3837015/91‑1 (MQ=255) aatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCAGCGGCTAAt < 2:2634052/91‑1 (MQ=255) aatCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCAGCGGCTAAt < 1:2197738/91‑1 (MQ=255) atCAATATATTGTTAGGAATGGGACAGAAATGATAAATAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtg > 1:3280380/1‑91 (MQ=255) atCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtg < 2:1833754/91‑1 (MQ=255) atCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtg < 2:1931415/91‑1 (MQ=255) atCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtg > 2:19578/1‑91 (MQ=255) atCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtg < 2:3543165/91‑1 (MQ=255) tCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtgt > 1:399099/1‑91 (MQ=255) cAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtgtg > 2:2105093/1‑91 (MQ=255) cAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtgtg > 2:2011164/1‑91 (MQ=255) cAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAAtgtg > 2:2217555/1‑91 (MQ=255) atatatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCa > 1:1872839/1‑91 (MQ=255) atatatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCa > 2:615506/1‑91 (MQ=255) atatatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCa > 1:1830181/1‑91 (MQ=255) tatatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCAc < 1:2598427/91‑1 (MQ=255) atatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACt < 2:1428914/91‑1 (MQ=255) atatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACt < 1:947560/91‑1 (MQ=255) atatTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACt < 1:104405/91‑1 (MQ=255) atTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTa < 2:2165996/91‑1 (MQ=255) ttGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTaa < 2:2034037/91‑1 (MQ=255) tGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAg < 2:2661692/91‑1 (MQ=255) gTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGa < 2:3685337/91‑1 (MQ=255) tAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAAt > 2:1056873/1‑91 (MQ=255) aGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATa < 2:624766/91‑1 (MQ=255) aGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATa < 1:1833961/91‑1 (MQ=255) gAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAgg > 1:1680562/1‑91 (MQ=255) aaTGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGa > 2:3105031/1‑91 (MQ=255) aTGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACt > 1:1269566/1‑79 (MQ=255) aTGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGaa < 1:728528/91‑1 (MQ=255) ggACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATAc > 1:943639/1‑91 (MQ=255) ggACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATAc > 1:3238498/1‑91 (MQ=255) ggACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATAc < 1:311914/91‑1 (MQ=255) gACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACa < 1:1962982/91‑1 (MQ=255) aCAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACAt < 2:2807120/91‑1 (MQ=255) aGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGa > 2:2733180/1‑91 (MQ=255) gAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAg < 1:1587733/91‑1 (MQ=255) gAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAg > 2:346978/1‑91 (MQ=255) aaaTGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGt < 1:3857777/91‑1 (MQ=255) aaaTGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGt < 1:3072619/91‑1 (MQ=255) aaTGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTa < 1:1893201/91‑1 (MQ=255) tGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGTACTTAAGAATAGGAATACATGAGtttt < 2:837401/91‑4 (MQ=255) tGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTaaa > 2:2695026/1‑91 (MQ=255) gATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTgaaa > 1:3129171/1‑91 (MQ=255) gATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTaaaa > 2:1880176/1‑91 (MQ=255) aTAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCgctgct < 1:3285015/55‑1 (MQ=255) aTAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCgctgct > 2:3284994/1‑55 (MQ=255) aGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCAt > 2:743218/1‑91 (MQ=255) aGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCAt > 2:1399591/1‑91 (MQ=255) gAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATg < 2:1563782/91‑1 (MQ=255) aTCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGta < 2:2344267/91‑1 (MQ=255) tCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGtat < 2:336011/91‑1 (MQ=255) aTTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATaa > 2:17929/1‑91 (MQ=255) aTTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATaa > 1:2340502/1‑91 (MQ=255) ttAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAg > 1:2792592/1‑91 (MQ=255) tAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAGTGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGa < 1:3080282/91‑1 (MQ=255) tAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGa < 1:1129988/91‑1 (MQ=255) tAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGa > 1:2375701/1‑91 (MQ=255) gTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGaaa < 1:3282712/91‑1 (MQ=255) tttCATTAGGAGGTAGTTCTTAAACATTAGCCGCGGGTAATGTGCACTTAGAAGTAGGAGTACTGGAGTAAAATTCGTGTATAAGAAATAc < 2:2687225/90‑1 (MQ=9) aTTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATAc > 1:1713218/1‑91 (MQ=255) aTTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAACGTGCACTTAAGAATAGGAATACATGAGTAAACCTCATGTATAAGAAATAc > 2:3196955/1‑91 (MQ=255) ttCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACt < 2:868042/91‑1 (MQ=255) tATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAAttt > 1:83519/1‑91 (MQ=255) tATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAAttt > 1:2086462/1‑91 (MQ=255) aTGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGTATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTc > 2:2333595/1‑91 (MQ=255) tGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCt < 1:2958132/91‑1 (MQ=255) tGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCt > 1:3726014/1‑91 (MQ=255) gtagtaGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTa > 1:3385733/1‑91 (MQ=255) agtagtTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTaaa < 1:466403/91‑1 (MQ=255) agtagtTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATAAGTAAAACTCATGTATAAGAAATACTAATTTCTaac > 2:3841086/1‑90 (MQ=255) gtagtTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAg < 1:1782638/91‑1 (MQ=255) gtagtTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAg < 2:1821608/91‑1 (MQ=255) agtTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGaa > 2:1229247/1‑91 (MQ=255) ttCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGaaaa < 1:894776/91‑1 (MQ=255) cTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAg < 1:2570045/91‑1 (MQ=255) ttACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGt > 2:2837727/1‑91 (MQ=255) tACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTa > 1:1232647/1‑91 (MQ=255) gcacaTTAGCAGCGGCTAATGTGTACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTAt > 1:792101/2‑91 (MQ=14) acaTTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTAttt < 2:1508535/91‑1 (MQ=255) acaTTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTAttt < 1:2858072/91‑1 (MQ=255) caTTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTc > 2:721280/1‑91 (MQ=255) caTTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTc > 1:979834/1‑91 (MQ=255) aTTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCt > 2:161477/1‑91 (MQ=255) aTTAGCAGCGGCTAATGTGTACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCt > 1:3587528/1‑91 (MQ=11) ttAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCtt > 1:3325883/1‑91 (MQ=255) tAGCAGCGGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCttt > 2:3188964/1‑91 (MQ=255) ccGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATg > 2:1793728/1‑91 (MQ=255) cGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGt > 2:1308800/1‑91 (MQ=255) cGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGt < 1:1297127/91‑1 (MQ=255) gctgctAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGtt > 2:2549577/1‑91 (MQ=255) gctgctAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGtt > 1:321338/1‑91 (MQ=255) gctgctAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGtt > 2:3249714/1‑91 (MQ=255) tgctAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTag > 1:430373/1‑91 (MQ=255) | AAAAATAATCAATATATTGTTAGGAATGGGACAGAAATGATAAAGAATCATTAGTTATTCATTATGTAGTAGTTCTTACACATTAGCCGCTGCTAATGTGCACTTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAG > USA300TCH1516_ALE/2145459‑2145639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |