| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 168,343 | G→A | 11.8% | intergenic (+310/+38) | yfkN_1 → / ← USA300TCH1516_00148 | Trifunctional nucleotide phosphoesterase protein YfkN/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 168,343 | 0 | G | A | 11.8% | 710.2 / 61.6 | 245 | intergenic (+310/+38) | yfkN_1/USA300TCH1516_00148 | Trifunctional nucleotide phosphoesterase protein YfkN/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (103/113); new base A (7/22); total (110/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 247 total aligned reads displayed.
ATTTAAAACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTT > USA300TCH1516_ALE/168253‑168430 | ttAAAACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCt < 1:1008810/91‑1 (MQ=255) tAAAACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTg > 2:1522321/1‑91 (MQ=255) aaaaCTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGa > 1:1928778/1‑91 (MQ=255) aaaCTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGaa < 2:3821934/91‑1 (MQ=255) aaCTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGaaa < 1:2686687/91‑1 (MQ=255) tctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATGAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGa < 1:3259981/91‑1 (MQ=255) tctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGa < 1:2606811/91‑1 (MQ=255) tctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGa < 1:112193/91‑1 (MQ=255) ctTTAAGGATTATGTTAATGAAAATAGAGAATATAATCTAACGAATCTATATAAATAAGGCACCACTATTTAAACCTCGAGCTGAGAAGat > 1:3604754/1‑91 (MQ=255) ctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGat > 2:2627246/1‑91 (MQ=255) tttAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGatc > 2:2819072/1‑91 (MQ=255) tttAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGatc < 1:3733720/91‑1 (MQ=255) aaGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGatcatc > 2:2581850/1‑91 (MQ=255) gATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAtt > 2:1705298/1‑91 (MQ=255) gATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGatgatcttt < 1:1257351/91‑4 (MQ=38) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt < 1:1509025/91‑1 (MQ=255) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt < 1:3502724/91‑1 (MQ=255) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt > 2:1734529/1‑91 (MQ=255) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt > 2:3011718/1‑91 (MQ=255) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCtttt < 2:1095413/91‑1 (MQ=38) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCtttt < 2:845288/91‑1 (MQ=38) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTc < 1:1873767/91‑1 (MQ=37) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTc < 2:1926896/91‑1 (MQ=38) ttATGTTAAGGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTc < 1:3721691/91‑1 (MQ=255) tATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCa < 2:508079/91‑1 (MQ=255) tATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCa < 1:696509/91‑1 (MQ=255) tATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTCa < 2:3857547/91‑1 (MQ=37) aTGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACTAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAg > 1:1561057/1‑91 (MQ=255) aTGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTCAg < 1:1044630/91‑1 (MQ=37) gTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGtt < 1:2850737/91‑1 (MQ=255) ttAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTc < 1:202627/91‑1 (MQ=255) tAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCg < 1:56403/91‑1 (MQ=255) tAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCAGAAAAGATCATGATTTCAGTTCg > 2:2958569/1‑91 (MQ=255) tAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCACGAGCTGAAAAGATCATCATTTCAGTTCg > 1:3110739/1‑91 (MQ=255) aTGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAg < 1:2384597/91‑1 (MQ=255) aTGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCCCGAGCTGAAAAGATCATCATTTCAGTTCGAg > 1:2509394/1‑91 (MQ=255) tGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTGAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAgg < 1:3276551/91‑1 (MQ=255) aaaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttt > 2:3334393/1‑91 (MQ=255) aaaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGttt < 1:927436/91‑1 (MQ=21) aaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttt < 2:3534314/91‑1 (MQ=255) agagagAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 2:3270034/89‑1 (MQ=255) aTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAg < 2:1242611/79‑1 (MQ=255) aTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 2:364183/91‑1 (MQ=255) gagaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttat > 1:272710/1‑91 (MQ=255) agaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttatt > 1:2081499/1‑91 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt > 2:2860066/1‑91 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt > 1:1424088/1‑91 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt < 2:605988/91‑1 (MQ=255) ataatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATc > 1:1489390/1‑91 (MQ=255) taatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATcc < 2:2728671/91‑1 (MQ=255) aatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCct < 1:415861/91‑1 (MQ=255) tataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCctct > 2:686463/1‑91 (MQ=255) tataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCctct < 1:1996409/91‑1 (MQ=255) ataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCtt > 1:3535213/1‑91 (MQ=255) aaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTg < 1:945379/91‑1 (MQ=255) cGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTa > 1:2340691/1‑91 (MQ=255) cGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTa < 2:2060376/91‑1 (MQ=255) gAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTAt < 2:2036627/91‑1 (MQ=255) gAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTAt > 2:2899368/1‑91 (MQ=255) aTCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATgg < 1:1879915/91‑1 (MQ=255) tCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATggg > 1:293887/1‑91 (MQ=255) tCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATggg < 1:3821328/91‑1 (MQ=255) tatataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTa < 2:2718622/91‑1 (MQ=255) atataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTAt > 1:3635882/1‑91 (MQ=255) tataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTAtt > 1:1351091/1‑91 (MQ=255) ataaataaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTc > 1:1645289/1‑91 (MQ=255) taaataaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCt > 2:3156291/1‑91 (MQ=255) aaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTAc < 2:2340691/91‑1 (MQ=255) aGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACt < 2:2240816/91‑1 (MQ=255) ggCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACtt > 2:1477288/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 2:3362425/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 1:1619125/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 2:2021308/1‑91 (MQ=255) cACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGa < 2:3087359/91‑1 (MQ=255) cACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGa < 2:1088960/91‑1 (MQ=255) aCCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGaa < 1:2145229/91‑1 (MQ=255) aCCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGaa > 2:1371604/1‑91 (MQ=255) ccAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGaaa < 1:1705298/91‑1 (MQ=255) cAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAt > 1:1758269/1‑91 (MQ=255) cAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTCTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAt > 2:151692/1‑91 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt > 2:3730550/1‑91 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 1:1239339/91‑1 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 2:1902397/91‑1 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 1:3874688/91‑1 (MQ=255) atTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGt < 1:523069/91‑1 (MQ=255) tttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGtt > 2:101023/1‑91 (MQ=255) ttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt < 1:1589464/91‑1 (MQ=255) ttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt < 2:2277329/91‑1 (MQ=255) ttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt > 2:1042926/1‑91 (MQ=255) aaaaCCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGtttt > 1:294553/2‑91 (MQ=21) aaaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTc < 2:1452253/91‑1 (MQ=255) aaaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTc < 1:81015/91‑1 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTcc > 1:562912/1‑91 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTcc < 1:1970487/91‑1 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTcc > 2:237856/1‑91 (MQ=255) aCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttt < 1:73463/39‑1 (MQ=255) aCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttt > 2:73463/1‑39 (MQ=255) aCCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCt > 1:1955646/1‑91 (MQ=21) tCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGtt > 1:2306385/1‑91 (MQ=255) cGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGttt > 2:80959/1‑91 (MQ=255) | ATTTAAAACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTT > USA300TCH1516_ALE/168253‑168430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |