| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 168,350 | A→T | 12.6% | intergenic (+317/+31) | yfkN_1 → / ← USA300TCH1516_00148 | Trifunctional nucleotide phosphoesterase protein YfkN/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 168,350 | 0 | A | T | 12.6% | 716.5 / 76.5 | 237 | intergenic (+317/+31) | yfkN_1/USA300TCH1516_00148 | Trifunctional nucleotide phosphoesterase protein YfkN/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (100/107); new base T (7/23); total (107/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.08e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
ACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTGTA > USA300TCH1516_ALE/168260‑168440 | aCTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGaaaa < 1:270333/91‑1 (MQ=255) tctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGa < 1:2606811/91‑1 (MQ=255) tctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGa > 2:146603/1‑91 (MQ=255) ctTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGat > 1:644858/1‑91 (MQ=255) tttAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGatc > 2:768083/1‑91 (MQ=255) tAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATAGTTAAACCTCGAGCTGAAAAGatcat > 1:3619000/1‑91 (MQ=255) aaGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGatcatc > 2:2581850/1‑91 (MQ=255) aGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGAtcatca > 2:1397559/1‑91 (MQ=255) gATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAtt > 2:1705298/1‑91 (MQ=255) gATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAtt < 1:3696987/91‑1 (MQ=255) gATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGatgatcttt < 1:1257351/91‑4 (MQ=38) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt > 2:3011718/1‑91 (MQ=255) aTTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCAttt < 1:1509025/91‑1 (MQ=255) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTc > 2:1480903/1‑91 (MQ=255) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTc < 1:1668340/91‑1 (MQ=38) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTc < 1:1873767/91‑1 (MQ=37) ttATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAACTGAAATGATGATCTTTTc < 2:1019492/91‑1 (MQ=37) ttATGTTAAGGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTc < 1:3721691/91‑1 (MQ=255) aTGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACTAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAg > 1:1561057/1‑91 (MQ=255) aTGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAg > 2:268696/1‑91 (MQ=255) gTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGtt < 1:2850737/91‑1 (MQ=255) ttAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTc < 1:202627/91‑1 (MQ=255) tAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCg < 1:56403/91‑1 (MQ=255) tAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCAGAAAAGATCATGATTTCAGTTCg > 2:2958569/1‑91 (MQ=255) aaTGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGa > 2:2810523/1‑91 (MQ=255) tGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAgg < 2:2021986/91‑1 (MQ=255) gAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGt > 2:2886482/1‑91 (MQ=255) aaaaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtt > 2:3132258/1‑91 (MQ=255) aaaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttt > 2:3334393/1‑91 (MQ=255) aaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttt > 2:3845083/1‑91 (MQ=255) aaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttt > 1:1043633/1‑91 (MQ=255) aaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttt < 2:3534314/91‑1 (MQ=255) aaTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttt > 1:1991919/1‑91 (MQ=255) agagagAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 2:3270034/89‑1 (MQ=255) aTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 2:664026/91‑1 (MQ=255) aTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 2:364183/91‑1 (MQ=255) aTAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt > 2:845214/1‑91 (MQ=255) tAGAGAATATAATATAACGAATCTATATAAAGAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGtttttt < 2:1005416/91‑1 (MQ=255) agagAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTtttta > 1:3264109/1‑91 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt > 1:1424088/1‑91 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt < 1:3476990/91‑1 (MQ=255) gaATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttattt > 2:2860066/1‑91 (MQ=255) aatataatatAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttatttt > 1:941707/1‑91 (MQ=255) atataatataACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTttttatttta < 1:1634384/91‑1 (MQ=255) tataatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTtttattttat < 2:2264384/91‑1 (MQ=255) ataatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATc > 1:1489390/1‑91 (MQ=255) aatataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCct > 1:1744867/1‑91 (MQ=255) tataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCctct < 1:1616304/91‑1 (MQ=255) ataaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCtt > 1:3535213/1‑91 (MQ=255) aaCGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTg < 1:945610/91‑1 (MQ=255) cGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTa < 2:272710/91‑1 (MQ=255) gAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTAt < 2:2036821/91‑1 (MQ=255) aTCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATgg < 1:1879915/91‑1 (MQ=255) tCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATggg > 1:293887/1‑91 (MQ=255) tatataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTa < 1:838027/91‑1 (MQ=255) tatataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTa < 1:1958354/91‑1 (MQ=255) tataAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTAtt > 1:1351091/1‑91 (MQ=255) ataaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCtttt < 2:2471270/91‑1 (MQ=255) taaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTa > 1:3596815/1‑91 (MQ=255) aaGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTAc < 2:2340691/91‑1 (MQ=255) aGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACt < 2:2240696/91‑1 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 2:477290/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 2:1136470/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 1:2073560/1‑91 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg < 1:3790298/91‑1 (MQ=255) gCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTg > 2:3362425/1‑91 (MQ=255) cACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGa < 2:1088794/91‑1 (MQ=255) cACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGa < 2:1089005/91‑1 (MQ=255) aCCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGaa > 2:1371604/1‑91 (MQ=255) aCCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGaa < 1:2145229/91‑1 (MQ=255) cAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAt > 1:1758269/1‑91 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 2:1902397/91‑1 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 1:3874688/91‑1 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt > 2:3732170/1‑91 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt < 1:1239339/91‑1 (MQ=255) aaTATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAAtt > 1:2346987/1‑91 (MQ=255) atTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttttt < 1:1082109/47‑1 (MQ=255) atTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGt < 1:523069/91‑1 (MQ=255) atTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGt < 1:41219/91‑1 (MQ=255) ttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt < 2:941707/91‑1 (MQ=255) ttAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt < 1:1589464/91‑1 (MQ=255) aaaaaCCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGttt > 2:1536106/3‑91 (MQ=21) aaaaCCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGtttt > 1:294553/2‑91 (MQ=21) aaaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTc < 1:81015/91‑1 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTcc > 2:733234/1‑91 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTcc > 1:562911/1‑91 (MQ=255) aaCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCCTTTACTTGAAATTTGTTTTcc > 1:324210/1‑91 (MQ=255) aCCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGttt < 1:73463/39‑1 (MQ=255) aCCTCGAACTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCt > 1:1955187/1‑91 (MQ=21) cTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGt < 1:2312174/91‑1 (MQ=255) tCGTGCTGATATGTTCATTTTTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGTGTTTTCTTTTACTTGAAATTTGTTTTCCTGtt < 2:2015140/91‑1 (MQ=255) cgaacTGAAATGATGATCTTTTCAGCTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGttt > 1:381483/5‑91 (MQ=25) cGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGttt < 2:515402/91‑1 (MQ=255) gAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTAt < 1:2512659/91‑1 (MQ=255) gAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTAt > 1:2197221/1‑91 (MQ=255) aaaaGATCATCATTTCAGTTCGAGGTTTTTTCTTTTATCCTCTTTGTATGGGTATTCGTTTACTTGAAATTTGTTTTCCTGTTTTTTTAtt > 1:3441771/1‑91 (MQ=255) aaaGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTg > 2:2311010/1‑91 (MQ=255) aaaGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTg > 2:1787055/1‑91 (MQ=255) aGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTGTa < 1:2431547/91‑1 (MQ=255) aGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTCTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTGTa > 2:3190592/1‑91 (MQ=255) | ACTCTTTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAAGGCACCAATATTTAAACCTCGAGCTGAAAAGATCATCATTTCAGTTCGAGGTTTTTTATTTTATCCTCTTTGTATGGGTATTCTTTTACTTGAAATTTGTTTTCCTGTTTTTTTATTGTA > USA300TCH1516_ALE/168260‑168440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |