| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,563,759 | A→G | 10.7% | intergenic (+24/‑114) | cycA_2 → / → nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,563,759 | 0 | A | G | 10.7% | 631.3 / 47.7 | 223 | intergenic (+24/‑114) | cycA_2/nhaK_2 | D‑serine/D‑alanine/glycine transporter/Sodium, potassium, lithium and rubidium/H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base A (113/86); new base G (3/21); total (116/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 227 total aligned reads displayed.
TGCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACT > USA300TCH1516_ALE/2563669‑2563849 | gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg < 1:2891572/91‑1 (MQ=255) gCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAg > 1:2431101/1‑91 (MQ=255) cTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGt < 2:74653/91‑1 (MQ=255) tGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGtt < 1:1486061/91‑1 (MQ=255) gAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTc > 2:375737/1‑91 (MQ=255) gAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTc > 2:1446127/1‑91 (MQ=255) aaaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCaa < 2:1692387/91‑1 (MQ=255) aaGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAAc > 1:1417984/1‑91 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:1175655/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 1:3477/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAAct < 2:1258887/91‑2 (MQ=255) aGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAAcc < 2:92671/91‑1 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActg < 2:38660/91‑3 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActg < 1:2504498/91‑3 (MQ=255) gCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActg < 1:2621783/91‑3 (MQ=255) cTCGCGTATGAACAGCGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAActga < 2:1620515/91‑4 (MQ=255) cTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGa > 1:370545/1‑91 (MQ=255) tCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAACTGAt < 2:1801726/91‑1 (MQ=255) tCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGAt > 1:450339/1‑91 (MQ=255) cgcgTATGAACAACGACAAAATGACAGCGGTCGTTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATa > 2:3801712/1‑91 (MQ=255) cgcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATa > 2:341708/1‑91 (MQ=255) gcgTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCGGTTGAACTGATAc < 2:2275380/91‑1 (MQ=39) tATGAACAACGACAAAGTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTag < 2:1591624/91‑1 (MQ=255) tATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTag < 2:3231550/91‑1 (MQ=255) aTGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTaga < 1:200815/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag < 1:3112932/91‑1 (MQ=255) tGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTagag > 1:664569/1‑91 (MQ=255) gAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGt > 2:2194668/1‑91 (MQ=255) gAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGt > 2:18794/1‑91 (MQ=255) aacaacGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtt > 2:534709/1‑91 (MQ=255) acGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttttt < 1:2530398/91‑1 (MQ=255) acGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGtttttt < 1:346554/91‑1 (MQ=255) aCAAAATGACATCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGa < 1:3518887/91‑1 (MQ=255) aCAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGa > 1:2048220/1‑91 (MQ=255) cAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGaa < 2:2573584/91‑1 (MQ=255) aaTGACCGCTGTCATTTCAGATATGACAATCCATAATTTAAACATCTCGCTCTAGTATCAGTTCAACAGATACTAGAGTCTTTTTGAAAAt > 2:2966920/1‑91 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATa > 1:2413025/1‑91 (MQ=255) aTGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATa > 1:111475/1‑91 (MQ=255) aCAGCGGTCATTACAGACATTACAATCAATAATTAAAACATCTCACTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACt < 1:3295356/91‑1 (MQ=255) cAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACtt < 2:1470731/91‑1 (MQ=255) cgctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 2:3697781/5‑91 (MQ=255) cgctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 1:357793/5‑91 (MQ=255) cgctgTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 1:1351391/5‑91 (MQ=255) aGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 2:3668833/1‑91 (MQ=255) aGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTc > 1:598979/1‑91 (MQ=255) cGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAt < 1:1076641/91‑1 (MQ=255) ggTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAtt > 1:1775884/1‑91 (MQ=255) ggTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAtt > 1:1274311/1‑91 (MQ=255) tCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCAtttt > 2:772259/1‑91 (MQ=255) cATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTa < 2:2538835/91‑1 (MQ=255) aTTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTAt > 2:1481071/1‑91 (MQ=255) tttCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATc < 1:1059098/91‑1 (MQ=255) tttCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATc < 1:3381024/91‑1 (MQ=255) tttCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATc > 1:2138558/1‑91 (MQ=255) tCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCaa < 1:876043/91‑1 (MQ=255) tCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCaa < 2:72149/91‑1 (MQ=255) tCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCaa < 1:2591392/91‑1 (MQ=255) cAGATATGACAATCAATACTTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAat > 1:1338574/1‑91 (MQ=255) cAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAat > 1:587985/1‑91 (MQ=255) aGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAata < 2:609184/91‑1 (MQ=255) gATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAatat > 1:1887363/1‑91 (MQ=255) atGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATc < 1:1680506/91‑1 (MQ=255) tGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCt < 2:2545906/91‑1 (MQ=255) tGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCt < 2:3586530/91‑1 (MQ=255) caatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATg < 2:3287835/91‑1 (MQ=255) aagccaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATTAATATATCTATg < 1:2997747/87‑1 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt > 2:1744943/1‑91 (MQ=255) aatcaatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGt < 1:752582/91‑1 (MQ=255) caatAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCAt > 1:1376346/1‑91 (MQ=255) ataatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTa < 1:959141/91‑1 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg < 1:2227695/91‑1 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg > 2:3331035/1‑91 (MQ=255) aatTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATg < 1:1582397/91‑1 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc > 2:1132680/1‑91 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc > 1:536503/1‑91 (MQ=255) atTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGc < 2:1412187/91‑1 (MQ=255) ttAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCt > 1:3332718/1‑91 (MQ=255) tAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCtt < 1:692589/91‑1 (MQ=255) tAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCtt > 2:1959176/1‑91 (MQ=255) cATCTCGCTCTAGTATCAGTTCAACCGATACTATAGATATTTTCAAAATAACTTCATTTTATCAATATACCTCTGTCATTATGCCTTaaac > 2:815072/1‑90 (MQ=255) cATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaaaa < 2:2242072/91‑1 (MQ=255) cATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTaaaa < 2:509900/91‑1 (MQ=255) aTCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAg < 2:492758/91‑1 (MQ=255) tctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGt > 1:3871259/1‑91 (MQ=255) tctcGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGt > 1:2642676/1‑91 (MQ=255) tcGCTCTAGTATCAGTTCAACCGTTACTAGAGTTTTTTTGAAAATAACTTCATTTTATCGATATATCTATGTCATTATGCCTTAAAAGTGa < 2:2960029/91‑1 (MQ=255) cGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGa < 2:242230/90‑1 (MQ=255) cGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGAt < 2:3824084/91‑1 (MQ=255) gCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATa < 1:1585635/91‑1 (MQ=255) tctAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATaaa < 2:1332774/91‑1 (MQ=255) ctAGTATCGGTTGAACTGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATaaaa > 1:3493928/1‑91 (MQ=38) ctAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATc > 1:3338932/1‑54 (MQ=255) gTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAatat > 2:2286530/1‑91 (MQ=255) gTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAatat < 2:1244620/91‑1 (MQ=255) gTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAatat > 2:2042375/1‑91 (MQ=255) tATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATAtt > 2:739962/1‑91 (MQ=255) aTCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTa > 2:1770518/1‑91 (MQ=255) tCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTaa > 2:2677953/1‑91 (MQ=255) cAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAAc > 1:3073633/1‑91 (MQ=255) aGTTCATCCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACt < 2:961655/91‑1 (MQ=255) | TGCTGAAAAGCTCGCGTATGAACAACGACAAAATGACAGCGGTCATTTCAGATATGACAATCAATAATTTAAACATCTCGCTCTAGTATCAGTTCAACCGATACTAGAGTTTTTTTGAAAATAACTTCATTTTATCAATATATCTATGTCATTATGCCTTAAAAGTGATAAAATATTAACT > USA300TCH1516_ALE/2563669‑2563849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |