| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 171,072 | A→T | 6.4% | intergenic (+421/‑29) | USA300HOU_RS07235 → / → adhE | hypothetical protein/Aldehyde‑alcohol dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 171,072 | 0 | A | T | 6.4% | 631.2 / 22.3 | 188 | intergenic (+421/‑29) | USA300HOU_RS07235/adhE | hypothetical protein/Aldehyde‑alcohol dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (67/109); new base T (8/4); total (75/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 210 total aligned reads displayed.
TATTTGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTATGAT > USA300TCH1516_ALE/170982‑171162 | tatTTGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAaataa > 2:1028134/1‑91 (MQ=255)tatTTGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAaataa < 2:162503/91‑1 (MQ=255)tatTTGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAaataa < 2:2076406/91‑1 (MQ=255) tttGTTCAAATAATATTCGAAATTAAACTTTTTTTTATTTAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAAtt > 2:1832353/1‑91 (MQ=255) tttGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAAtt < 2:1855844/91‑1 (MQ=255) ttGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTc < 1:266868/91‑1 (MQ=255) tGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAATTATTTca < 2:1042444/91‑1 (MQ=255) tGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTca > 1:1086435/1‑91 (MQ=255) tGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTca > 1:2556048/1‑91 (MQ=255) ttCAAATAATACTCGAAATTAAAGTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGATATGTACTATAATGTTTGTGAAATAATTcaca < 2:2961322/91‑1 (MQ=255) tCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACaa > 2:2042650/1‑91 (MQ=255) tCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACaa < 1:676737/91‑1 (MQ=255) tCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACaa < 1:2995359/91‑1 (MQ=255) tCAAACAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAATTATTTCACaa < 2:3148150/91‑1 (MQ=255) aaaTAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAg < 2:3564996/91‑1 (MQ=255) aataatATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTcac < 2:2425895/86‑1 (MQ=255) aataatATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTcac > 1:2425895/1‑86 (MQ=255) ataataTTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGta < 2:2735191/91‑1 (MQ=255) aataTTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGtata < 2:788540/91‑1 (MQ=255) tatTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATaaa < 2:962108/91‑1 (MQ=255) tatTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATaaa < 1:1118074/91‑1 (MQ=255) atTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAg < 2:2333075/91‑1 (MQ=255) atTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAg < 2:91824/91‑1 (MQ=255) atTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAg < 1:2494122/91‑1 (MQ=255) ttCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAgg < 2:1337945/91‑1 (MQ=255) ttCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAgg > 1:642487/1‑91 (MQ=255) tCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGa > 1:2226588/1‑91 (MQ=255) tCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGa < 2:2614366/91‑1 (MQ=255) cGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAg < 1:1684287/91‑1 (MQ=255) cGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAg < 1:3528588/91‑1 (MQ=255) cGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAg < 1:1875071/91‑1 (MQ=255) aTTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGt > 1:1652282/1‑91 (MQ=255) aTTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGt < 1:3377132/91‑1 (MQ=255) tAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTg < 1:806509/91‑1 (MQ=255) aaaCTTTTTTTTTTATTTTTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGt > 2:1250533/1‑91 (MQ=255) aaaCTTTTTTGTATCGGCTTTGCTTTATATCCTGAGAGAGATGTACTATAATGGTTGTGAGATAATTCACAAAGTATAACGGAGTGGTTGt < 2:2187838/91‑1 (MQ=255) aaCTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGta < 1:1832530/91‑1 (MQ=255) aaCTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGta < 1:889232/91‑1 (MQ=255) aCTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGtat < 2:1436488/91‑1 (MQ=255) cTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGtata > 2:617889/1‑91 (MQ=255) ttttttGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTatat > 1:3812639/1‑91 (MQ=255) ttttGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGt < 1:1423207/91‑1 (MQ=255) ttttGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGt < 2:3628631/91‑1 (MQ=255) tGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAATTATAAAGGAGTGGTTGTATATGTTaa < 2:2454680/91‑1 (MQ=255) taGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACtat > 1:2022854/1‑91 (MQ=255) gAATTTTCTTTATATCCTGAGAGACATGTACTATAAAGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATAc < 2:1534395/91‑1 (MQ=255) aTTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCt < 1:2508579/91‑1 (MQ=255) tttATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGaaaaa < 1:2547084/91‑1 (MQ=255) ttATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAg < 1:461472/91‑1 (MQ=255) tataTCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGa > 1:1373219/1‑91 (MQ=255) tataTCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGa < 1:2379532/91‑1 (MQ=255) atatCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGaa < 2:1063674/91‑1 (MQ=255) tatCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGaaa > 1:1706486/1‑91 (MQ=255) atCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACATGAAAAAGaaaa < 2:2292332/91‑1 (MQ=255) ccTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATc > 1:3234828/1‑91 (MQ=255) tGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGt < 2:2824400/91‑1 (MQ=255) gagagaCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTg < 2:806958/91‑1 (MQ=255) agagaCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTgg > 2:573366/1‑91 (MQ=255) agagaCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTgg > 1:976876/1‑91 (MQ=255) agagaCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTgg > 2:573318/1‑91 (MQ=255) gagaCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGa < 2:3328000/91‑1 (MQ=255) aCATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCg < 2:1676374/91‑1 (MQ=255) cATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGa > 1:3420065/1‑91 (MQ=255) cATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGCTAACTATACCTGAAAAAGAAAATCGTGGATCGa > 1:3181180/1‑91 (MQ=255) aaTGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGa < 2:2527033/90‑1 (MQ=255) aTGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGaa > 2:1264551/1‑91 (MQ=255) tGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGaaa < 1:617889/91‑1 (MQ=255) cTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAAc < 2:1360587/91‑1 (MQ=255) cTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAAc < 1:260117/91‑1 (MQ=255) cTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAAc < 1:1286518/91‑1 (MQ=255) cTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAAc < 1:939238/91‑1 (MQ=255) taATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaag < 1:2876814/91‑1 (MQ=255) taATGGTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaag < 2:2877244/91‑1 (MQ=255) aaTGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaaga > 1:2681305/1‑91 (MQ=255) aaTGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaaga > 2:1207783/1‑91 (MQ=255) aaTGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaaga < 2:3005913/91‑1 (MQ=255) aTGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaagaa < 1:1028134/91‑1 (MQ=255) tGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACaagaag < 1:2232358/91‑1 (MQ=255) tttGTGAATTATTTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTg > 2:1142586/1‑91 (MQ=255) tttGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTg < 1:1985693/91‑1 (MQ=255) ttGTGAATTATTTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAACTCGTGGATCGAACGAACAAGAAGTgg > 2:188275/1‑91 (MQ=255) ttGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTgg > 2:532730/1‑91 (MQ=255) tgtgAATTATTTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGc > 2:2265536/1‑91 (MQ=255) tgtgAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTg < 2:485850/89‑1 (MQ=255) tgtgAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGc < 1:2172122/91‑1 (MQ=255) tgtgAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGc < 1:2646749/91‑1 (MQ=255) tgtgAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATAGTGGATCGAAAGAACAAGAAGTGGc > 1:3628446/1‑91 (MQ=255) tgtgAAACAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACTAGAAGTGGc < 1:1950881/91‑1 (MQ=255) tgAATTATTTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCaa > 1:2179439/1‑91 (MQ=255) tgAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCaa > 1:1140398/1‑91 (MQ=255) gAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAAt < 2:3265387/91‑1 (MQ=255) gAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAAt < 1:1526523/91‑1 (MQ=255) aaaTAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAAtt < 1:833420/91‑1 (MQ=255) aaaTAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAAtt > 1:2687961/1‑91 (MQ=255) aataatTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTa > 1:722652/1‑91 (MQ=255) aataatTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTa < 1:1795292/91‑1 (MQ=255) ataatTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTAt < 2:2388799/91‑1 (MQ=255) taatTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTAtg > 2:931630/1‑91 (MQ=255) aatTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTAtga < 2:2204265/91‑1 (MQ=255) atTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTAtgat > 1:1134748/1‑91 (MQ=255) | TATTTGTTCAAATAATATTCGAAATTAAACTTTTTTGTATAGAATTTTCTTTATATCCTGAGAGACATGTACTATAATGTTTGTGAAATAATTCACAAAGTATAAAGGAGTGGTTGTATATGTTAACTATACCTGAAAAAGAAAATCGTGGATCGAAAGAACAAGAAGTGGCAATTATGAT > USA300TCH1516_ALE/170982‑171162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |