| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 253,984 | G→T | 7.6% | intergenic (+197/+165) | asbF → / ← USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 253,984 | 0 | G | T | 7.6% | 769.9 / 37.7 | 225 | intergenic (+197/+165) | asbF/USA300HOU_RS01125 | 3‑dehydroshikimate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (122/85); new base T (9/8); total (132/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 242 total aligned reads displayed.
AAGTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCT > USA300TCH1516_ALE/253894‑254074 | aaGTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAagag < 1:1004751/91‑1 (MQ=255)aaGTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAagag > 2:3160492/1‑91 (MQ=255) aGTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGt > 1:1188467/1‑91 (MQ=255) gTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGta < 2:3643049/91‑1 (MQ=255) tCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtat < 1:162087/91‑1 (MQ=255) cATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtata < 1:1044308/91‑1 (MQ=255) ttgtttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGtatata > 1:253264/1‑91 (MQ=255) gtttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAc < 2:2711482/91‑1 (MQ=255) gtttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAAc < 1:2589343/91‑1 (MQ=255) tttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATAACCATTCACAGTAACAATCCTCACCATTTAAAAGAGTATATAAcc < 1:3837431/91‑1 (MQ=255) ttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCt < 1:296192/91‑1 (MQ=255) ttgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCt > 2:1387571/1‑91 (MQ=255) tgtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtt < 2:2893625/91‑1 (MQ=255) gtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCttt > 1:1703415/1‑91 (MQ=255) gtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCttt > 1:169661/1‑91 (MQ=255) gtAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCttt > 1:397981/1‑91 (MQ=255) tAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtttt < 1:2833612/91‑1 (MQ=255) tAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCtttt < 1:2253928/91‑1 (MQ=255) aaaGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTc < 1:1020125/91‑1 (MQ=25) aaaGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:13176/1‑91 (MQ=255) aaaGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTc > 1:13012/1‑91 (MQ=255) agaatGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCaa < 1:1332870/91‑1 (MQ=25) gaagGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCAAt < 2:1525163/91‑1 (MQ=25) gaagGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAAt > 1:3009276/1‑91 (MQ=255) aagGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATa > 1:648149/1‑91 (MQ=255) ggTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGt < 1:2663702/91‑1 (MQ=255) gtgtACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGGTtatatactc < 2:1731893/79‑4 (MQ=38) gtgtACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTg > 1:2827063/1‑91 (MQ=255) tgtACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGa < 2:2455712/91‑1 (MQ=21) gtACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAg < 2:2363139/91‑1 (MQ=255) aCTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGt > 1:2669447/1‑91 (MQ=255) aCTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGt > 1:3667798/1‑91 (MQ=255) cTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGta > 1:2655875/1‑91 (MQ=255) tttATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGtat < 2:2179569/91‑1 (MQ=255) atataAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATg > 1:2287357/1‑91 (MQ=255) ataAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGat > 2:2548507/1‑91 (MQ=255) ataAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGat > 1:3357106/1‑91 (MQ=255) aaGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataa < 1:1738770/91‑1 (MQ=255) aaGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataa > 2:1762456/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:3879045/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 2:1408830/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat > 1:1569217/1‑91 (MQ=255) aGTATATAGCGATGGTCATACCCATACACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat < 1:3606606/91‑1 (MQ=255) gTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat‑a < 1:2302880/91‑1 (MQ=255) gTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGataat‑a < 1:2143309/91‑1 (MQ=255) atataGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaa > 2:200594/1‑91 (MQ=255) atataGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaa < 2:2947628/91‑1 (MQ=255) aGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaa > 1:2982922/1‑91 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaaa < 2:3376288/91‑1 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaaa > 2:480543/1‑91 (MQ=255) gCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaaa > 2:3745182/1‑91 (MQ=255) cGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAg < 1:1202849/91‑1 (MQ=255) gATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGc < 2:1017658/91‑1 (MQ=255) gATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGc < 2:109461/91‑1 (MQ=255) gATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGc < 1:1016277/91‑1 (MQ=255) tCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaa > 1:1926428/1‑83 (MQ=255) tCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑aaaaaaa < 2:1926428/83‑1 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGt > 2:1699042/1‑41 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCtgttg > 1:2561875/1‑91 (MQ=255) cATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCtgttg > 2:2721941/1‑91 (MQ=255) aTACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCtgttgt < 2:3591365/91‑1 (MQ=255) aTACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTAAGGTATATGATAAT‑AAAAAAAAGCCtgttgt < 2:2499087/91‑1 (MQ=255) aCCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTca > 1:3318778/1‑91 (MQ=255) cccATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTcac > 1:2386753/1‑91 (MQ=255) ccATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTcaca < 2:3009276/91‑1 (MQ=255) aTTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACGTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAAt < 2:3402761/91‑1 (MQ=255) ttCACAGTAACAATCCTCACCATTGAAAAGCGTATATAAACTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATg > 1:1617654/1‑91 (MQ=255) ttCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATg > 2:1789791/1‑91 (MQ=255) tCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATgg > 1:909059/1‑91 (MQ=255) acaGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTc > 2:562287/1‑91 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCa < 1:1772591/91‑1 (MQ=255) caGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCa < 1:3452079/91‑1 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCAt > 2:3207046/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCAt > 1:1140625/1‑91 (MQ=255) aGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCAt > 2:604055/1‑91 (MQ=255) aaCAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGa > 1:1894371/1‑91 (MQ=255) aTCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACg > 1:789168/1‑91 (MQ=255) aTCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACg > 1:3416523/1‑91 (MQ=255) tCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGa > 2:2261533/1‑91 (MQ=255) cTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACa > 1:2906168/1‑91 (MQ=255) tCACTATTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACAt > 2:2115872/1‑91 (MQ=21) cactaTTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATa > 1:2949565/5‑91 (MQ=21) cACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATa > 2:1488937/1‑91 (MQ=255) aCCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATAc < 1:706906/91‑1 (MQ=255) ctaTTGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt > 2:3545310/3‑91 (MQ=21) ccATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACt < 1:445324/91‑1 (MQ=255) aTTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACttt > 2:3499343/1‑91 (MQ=255) ttGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTa > 1:1227909/1‑91 (MQ=255) ttGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTa < 1:311665/91‑1 (MQ=255) tGAAAAGGTTATATACTCTTTTCAATGGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaa > 2:3274564/1‑91 (MQ=25) gAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa > 1:3022101/1‑91 (MQ=255) gAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa > 2:1848478/1‑91 (MQ=255) gAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTaaa > 2:705806/1‑91 (MQ=255) aaaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg > 1:2466619/1‑91 (MQ=255) aaaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAATAAAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAg < 2:185454/91‑1 (MQ=255) aaGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACGTACTTTAAAGGt < 1:2997203/91‑1 (MQ=255) gagTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGttt > 2:2554775/1‑91 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGttt < 2:228683/89‑1 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt < 1:138052/91‑1 (MQ=255) gTATATAACCTTTTCAATAGTGAGGTATATGAAAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCt < 2:3054561/91‑1 (MQ=255) | AAGTCATTGTTTGTAAAGAAGGTGTACTTTATATAAGTATATAGCGATGGTCATACCCATTCACAGTAACAATCCTCACCATTGAAAAGAGTATATAACCTTTTCAATAGTGAGGTATATGATAAT‑AAAAAAAAGCCTGTTGTCACAATGGTCATAGACACGACATACTTTAAAGGTTTCT > USA300TCH1516_ALE/253894‑254074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |