| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 419,955 | C→T | 7.7% | intergenic (+173/+93) | rpsR → / ← USA300HOU_RS01950 | 30S ribosomal protein S18/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 419,955 | 0 | C | T | 7.7% | 715.1 / 31.9 | 221 | intergenic (+173/+93) | rpsR/USA300HOU_RS01950 | 30S ribosomal protein S18/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (100/104); new base T (15/2); total (115/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 228 total aligned reads displayed.
ATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTAGATA > USA300TCH1516_ALE/419865‑420045 | atgatgTGAATGTTTTGTGTTCGGAGTTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTAc < 1:3599269/91‑1 (MQ=255) tgatgTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACg > 1:1024036/1‑91 (MQ=255) tgatgTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACg < 1:3658082/91‑1 (MQ=255) tgatgTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACg > 1:966537/1‑91 (MQ=255) gtgAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCAtt > 2:3774046/1‑91 (MQ=255) tgAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCATAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCAttt < 2:2990437/91‑1 (MQ=255) tgAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCAttt < 2:1577218/91‑1 (MQ=255) gAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCAtttt < 2:1993122/91‑1 (MQ=255) aaTGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTta > 1:2060790/1‑91 (MQ=255) aaTGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTta < 1:1492078/91‑1 (MQ=255) tGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTtaaa < 2:1249037/91‑1 (MQ=255) gTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTtattt < 1:451293/91‑4 (MQ=255) gTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTtaaat > 1:2387186/1‑91 (MQ=255) ttttGTGTTAGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTtattta < 2:3340096/91‑5 (MQ=255) tttGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTtaaataa > 1:11291/1‑91 (MQ=255) gtgtTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAAt > 2:3292558/1‑91 (MQ=255) gtgtTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAAt > 2:936453/1‑91 (MQ=255) tgtTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATg < 2:1540755/91‑1 (MQ=255) tgctCGGCATTTGCACAAAGATATGTTTATATTGAAAAAATAATATGAATTAAAAAAAAAAAAAAAAGAACTACGCATTTTAAATAAAATg < 2:1542021/88‑1 (MQ=255) ttCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTATGCATTTTATTTAAAATGcg < 1:2270597/91‑2 (MQ=38) cGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTATTTAAAATGcgta < 1:706570/91‑4 (MQ=255) ggAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAg < 1:1565701/91‑1 (MQ=255) aTTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGctc < 1:290617/91‑1 (MQ=255) aTTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGctc < 2:2764986/91‑1 (MQ=255) aTTTGCACAAAGATATGTTGATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGctc < 2:912536/91‑1 (MQ=255) tGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCtcttc < 1:1721418/91‑1 (MQ=255) tGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCtcttc > 2:800129/1‑91 (MQ=255) gCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCtcttct < 2:2884212/91‑1 (MQ=255) gCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCtcttct < 1:1463245/91‑1 (MQ=255) cacaAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTcttctt < 1:526215/91‑1 (MQ=255) acaAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCttt > 2:3280251/1‑91 (MQ=255) aGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCt > 1:276972/1‑91 (MQ=255) aGATATGTTTATATTGCAAAAACAATACGAATTTCGATGCATACTCAAAGAACTACGCATTTTAAATAAAATACATAGCTCTTCTTTTTcc > 2:2202368/1‑90 (MQ=255) tatGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGc < 1:2737950/91‑1 (MQ=255) tatGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGc < 2:3072418/91‑1 (MQ=255) atGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCa > 2:2561189/1‑91 (MQ=255) atGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCa > 2:538084/1‑91 (MQ=255) atGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCa < 1:554080/91‑1 (MQ=255) tGTTTATATTGCCAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCAt > 1:2969273/1‑91 (MQ=255) gTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATa > 1:1812641/1‑91 (MQ=255) tttATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATAc > 1:1876635/1‑91 (MQ=255) tttATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATAc > 2:1952076/1‑91 (MQ=255) tttATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATAc < 1:626672/91‑1 (MQ=255) tttATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATAc < 1:1270050/91‑1 (MQ=255) atatTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGaa < 1:2281122/91‑1 (MQ=255) gCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTaaa > 1:2570405/1‑91 (MQ=255) gCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTaaa > 2:462409/1‑91 (MQ=255) cAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTaaaa > 1:3456574/1‑91 (MQ=255) cAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTaaaa > 2:1133741/1‑91 (MQ=255) aaaTAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATaa < 2:635286/91‑1 (MQ=255) aataatATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAAc < 2:731709/91‑1 (MQ=255) aataatATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAAc < 1:3149263/91‑1 (MQ=255) aataatATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAAc < 2:600661/91‑1 (MQ=255) atatGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTcgc > 1:3534952/1‑91 (MQ=255) atatGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTcgc < 1:2557464/91‑1 (MQ=255) tatGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTcgcg > 1:1438406/1‑91 (MQ=255) atGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCga > 2:1044239/1‑91 (MQ=255) atGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCga > 2:856943/1‑91 (MQ=255) aaTATAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAAGAACTCGCGAGAc < 1:3001129/91‑1 (MQ=255) aTTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGAcc > 1:1811260/1‑91 (MQ=255) aTTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGAcc > 2:2428402/1‑91 (MQ=255) tttAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCgaga < 1:2547630/88‑1 (MQ=255) tttAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCgaga > 2:2547630/1‑88 (MQ=255) tttAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCt < 1:2095263/91‑1 (MQ=255) ttAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCta < 2:189799/91‑1 (MQ=255) gATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATaa < 1:782419/91‑1 (MQ=255) aTGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAg < 2:645666/91‑1 (MQ=255) tGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGt < 2:309792/91‑1 (MQ=255) tGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGt < 2:614620/91‑1 (MQ=255) tGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGt > 2:3026900/1‑91 (MQ=255) tGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGt > 1:1638152/1‑91 (MQ=255) cATAAATAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGtct > 1:3015079/1‑91 (MQ=255) cATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGtct < 2:3529846/91‑1 (MQ=255) aTAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTcgcg < 1:59523/76‑1 (MQ=255) aTAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGtctc < 2:922765/91‑1 (MQ=255) tAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTctct < 1:385855/91‑1 (MQ=255) tAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTctct < 2:2900764/91‑1 (MQ=255) aaaaagaaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTctct > 1:490005/2‑91 (MQ=14) aaaaagaaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTctct > 2:3521828/2‑91 (MQ=14) aaaagaaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCtt > 2:2196781/1‑91 (MQ=17) aaaaaaaGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCtt < 2:1788690/91‑1 (MQ=255) aaaaaaGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCttt < 1:3447531/91‑1 (MQ=255) gaaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGCATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCt > 1:1493460/2‑91 (MQ=18) gaaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCt > 1:1533188/2‑91 (MQ=21) aaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTc > 1:1159846/1‑91 (MQ=18) aaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTTTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTc > 1:1159881/1‑91 (MQ=18) aaGAGCTATGCATTTTATTTAAAATGCGTAGTTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTc > 1:1376987/1‑91 (MQ=21) aaGAGCTATGCATTTTATTTAAAATGCGTAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGCGACCTATAAGTCTCTTTCCTc > 2:3660004/1‑91 (MQ=25) aaGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTc > 2:1118061/1‑91 (MQ=255) aaGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTc > 1:806001/1‑91 (MQ=255) gAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGtc > 1:3200539/1‑80 (MQ=255) gAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGtc < 2:3200539/80‑1 (MQ=255) gAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCAc > 1:1419505/1‑91 (MQ=255) aaCTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACt < 2:2535930/91‑1 (MQ=255) aaCTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACt < 1:3292558/91‑1 (MQ=255) aCTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTa > 1:506399/1‑91 (MQ=255) cTACGCATTTTAAATAAAATGCATAGTTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTAg > 2:2219298/1‑91 (MQ=255) aCGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCCTACGAATTAAAATAACTCGCGAGACCGATAAGTCTCTTTCCTCACTaact > 2:3603747/1‑88 (MQ=255) cGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTAGATa > 1:2126060/1‑91 (MQ=255) cGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTAGATa > 1:2126198/1‑91 (MQ=255) | ATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAACTACGCATTTTAAATAAAATGCATAGCTCTTCTTTTTCTTGCATACGAATTAAAATAACTCGCGAGACCTATAAGTCTCTTTCCTCACTAGATA > USA300TCH1516_ALE/419865‑420045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |