Predicted mutation
evidence seq id position mutation annotation gene description
JC CP000731 6,552 +TCTCCAGGCACTTGTGCATATTCTGAAA intergenic (+1069/‑419) cadX → / → USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 65521 (0.000)195 (1.030)
+TCTCCAGGCACTTGTGCATATTCTGAAA
100/212 0.2 99.6% intergenic (+1069/‑419) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator
?CP000731 6553 = 1 (0.000)intergenic (+1070/‑418) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

Only 100 of 299 total aligned reads displayed.

AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6420‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  >  CP000731/6553‑6685
                                                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                     
  ttctAGGTTGTGATTTGATATTCATTCCATCTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTC                                                                                                                                                               <  2:400354/131‑1
   TTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTTTTGGGGATTAGGAACAATCAACTCTCC                                                                                                                                                              <  1:245306/135‑1
     CAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATACTGCCGTAAAACCGGCTGTGCCATATACCATATACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCGAG                                                                                                                                                            >  2:62910/1‑135
      AGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTTTTGGGGAATAGGAACAATCCACTCTCCAGG                                                                                                                                                           <  1:272470/135‑1
       GGTGGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGC                                                                                                                                                          <  1:227493/135‑1
        GTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGTTTTGCCGCAATCCACTCTCCAGGCA                                                                                                                                                         <  1:670086/135‑1
        GTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCA                                                                                                                                                         <  1:414402/135‑1
         TTGTGACTTGATATCCTTTCCATTTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCAC                                                                                                                                                        <  2:527215/135‑1
            TGATTTTATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTG                                                                                                                                                     <  2:522109/135‑1
            TGATTTGATATTCATTCCATTTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTG                                                                                                                                                     <  2:87072/135‑1
            TGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTG                                                                                                                                                     >  1:649295/1‑135
            TGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAAAAATCCACTCTCCAGGCACTTG                                                                                                                                                     >  2:32957/1‑135
                 TGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCAT                                                                                                                                                >  1:78411/1‑135
                   attTTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATATGAACAATTCACTCTTCATGCACTTGTGCATAT                                                                                                                                              <  1:525799/132‑1
                     ATTCATCCCATATTTTTCTAGTTCAATAATTGAGAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGTAACAATCCACTCTCCAGGCACTTGTGCATATTC                                                                                                                                            <  2:118973/135‑1
                            CCATATTTTTCTGGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAAT                                                                                                                                     <  2:163321/135‑1
                            CCAGATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAAT                                                                                                                                     <  2:467313/135‑1
                               TATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCA                                                                                                                                  >  1:106712/1‑135
                                    TTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGT                                                                                                                             <  2:651727/135‑1
                                       TAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATG                                                                                                                          >  2:233299/1‑135
                                       TAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCGGTATG                                                                                                                          >  2:66955/1‑135
                                        atttttAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGT                                                                                                                         >  2:340235/7‑135
                                             AAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTCTAAGAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTTTGAAAATCCACCTGTATGTGTCAC                                                                                                                    <  1:265903/135‑1
                                               AAATTGATAATGCTTCCGTAAAACCAGCTGTGCTATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTTTCCAGGCGCTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGC                                                                                                                  <  1:350223/135‑1
                                               AAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTCTGTGGCACGC                                                                                                                  >  2:610384/1‑135
                                               AAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGC                                                                                                                  <  1:583191/135‑1
                                                   TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAAC                                                                                                              <  1:501261/135‑1
                                                    GATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAACAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAGCA                                                                                                             >  2:154901/1‑135
                                                     ATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCCCTTGTGCATATTCTGAAACTCCACCTGTATGTGTCACGCCAACAT                                                                                                            >  2:273705/1‑135
                                                     ATAATGCTGCCGTAAAACCGGCTGTGCCATATACAATAGACTTGTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACAT                                                                                                            <  1:92126/135‑1
                                                       AATGCTGCCGTAAAACCGGCTGTGCCATATACGATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCAGTAGGTTTCACGCCAACATCA                                                                                                          >  2:472268/1‑135
                                                         TGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                        <  1:67621/135‑1
                                                          GCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCTCCTGTATGTGTCACGCCAACATCATAA                                                                                                       <  1:300501/135‑1
                                                          GCTGCCCGAAAACCGGCTTGGCCATATACGATAGACTCTTTAACAGACATTTCTTGGTGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAA                                                                                                       <  2:176916/135‑1
                                                               CGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGT                                                                                                  >  1:479843/1‑135
                                                                  AAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAAC                                                                                               >  2:547746/1‑135
                                                                   agACCGACTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACT                                                                                              <  2:48328/133‑1
                                                                    AACAGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCTCTTGTTTGTGTCACGTTAACATCATAACCAGTAACTA                                                                                             <  1:36274/135‑1
                                                                     ACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGTCAACATCATAACCAGTAACTAA                                                                                            <  1:666254/135‑1
                                                                     ACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAAAAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAA                                                                                            >  1:201670/1‑135
                                                                       CGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATA                                                                                          >  1:651329/1‑135
                                                                        GGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATAC                                                                                         >  2:541872/1‑135
                                                                          CTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCCCGCCAACATCATAACCAGTAACTAATACAg                                                                                       >  2:202835/1‑134
                                                                            GTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCAACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTA                                                                                     >  1:70767/1‑135
                                                                            GTGCCATATACCATAGACACTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCANCCTNANAACCAGTAACTACTACATTA                                                                                     >  1:285916/1‑135
                                                                             TGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTAT                                                                                    >  1:384647/1‑135
                                                                                 ATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCC                                                                                >  2:56493/1‑135
                                                                                     cCCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCT                                                                            <  2:666360/134‑1
                                                                                             CTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTAACGCCTTCTTTAAACTT                                                                    >  2:143485/1‑135
                                                                                             CTCTTTAATAGACATTTCTAGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACATGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTT                                                                    >  2:242142/1‑135
                                                                                                TTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATC                                                                 <  2:455892/135‑1
                                                                                                TTTAATAGACATTTATTGGGGAATATGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATCACCAGTAACTAATACATTATCGCTTTCTTTAAACTTATC                                                                 <  1:348933/135‑1
                                                                                                    ATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATTCATTATCGTCTTCTTTAAACTTATCATTC                                                             <  1:388412/135‑1
                                                                                                        ACATTTCTTGGGGAATAGGAACAATCCACTAACCAGACACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAAC                                                         >  1:255633/1‑135
                                                                                                         CATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                        <  2:106712/135‑1
                                                                                                         CATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                        >  1:595706/1‑135
                                                                                                          ATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTT                                                       >  2:656809/1‑135
                                                                                                           TTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAATCAGTAATTAATACATTATCGTTTTTTTTAAACTTATCATTCGAACTTG                                                      <  1:260728/135‑1
                                                                                                           TTTCTTGGGGAATAGGAACAATCCAATCACCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATAATTCGAACTTG                                                      >  1:373518/1‑135
                                                                                                            TTCTTGGGGAATAGGAACAAACCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGA                                                     >  1:636485/1‑135
                                                                                                                TGGGGAATAGGAACAACTCACTCTCCAGGCACTTGTTCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCACAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCA                                                 <  2:505181/135‑1
                                                                                                                 GGGGAATAGGAACAATCCACTCTACAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAA                                                >  1:367266/1‑135
                                                                                                                  GGGACTAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATGATTCGAACTTGTTTCAAC                                               >  1:322828/1‑135
                                                                                                                  GGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATCACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAC                                               >  2:281394/1‑135
                                                                                                                   GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAGCTTGATTCAACA                                              >  2:444824/1‑135
                                                                                                                   GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACA                                              <  1:622754/135‑1
                                                                                                                   GGAATAGGAACAAGCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTGAACTTATCATTCGAACTTGATTCAACA                                              <  1:441195/135‑1
                                                                                                                    GAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCAGAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAA                                             <  2:92236/135‑1
                                                                                                                     AATTGGAACAATCCACTCTCCAGGCACTTGTACATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAAT                                            >  1:169399/1‑135
                                                                                                                     AATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAAT                                            >  1:422548/1‑135
                                                                                                                          GAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTG                                       <  1:192744/135‑1
                                                                                                                            ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTACACTTATCATTCGAACTTGATTCAACAATACCTGCA                                     <  2:591672/135‑1
                                                                                                                                TCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGTCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAT                                 <  1:32957/135‑1
                                                                                                                                TCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAT                                 >  1:135639/1‑135
                                                                                                                                TCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAT                                 >  1:463728/1‑135
                                                                                                                                 CCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCAGAATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATC                                >  1:489361/1‑135
                                                                                                                                  CACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCT                               <  2:452010/135‑1
                                                                                                                                    CTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTAT                             <  2:301884/135‑1
                                                                                                                                      CTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAC                           >  1:309549/1‑135
                                                                                                                                      CTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCAATCGAACTTGATTCAACCATACCTGCAAAATCTAAAC                           >  2:230106/1‑135
                                                                                                                                       cCCAGGCCCGTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAAAATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACC                          <  2:427442/134‑1
                                                                                                                                       TCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACa                          >  1:185602/1‑134
                                                                                                                                       TCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAGGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTGAGACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACC                          >  2:634760/1‑135
                                                                                                                                         CAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTCATCCCGCCACTGCTGCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAG                        >  1:453951/1‑135
                                                                                                                                             CACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTGACTAATACATTATCGCCTTCTTTAAACTTATCATACGAACTTGATGCAACAATACCTGCAAAATCTATACCAGGAAT                    <  2:386349/135‑1
                                                                                                                                             CACTTGTGCATATTATTAAAATCCACCTGTATCTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAAT                    <  2:266241/135‑1
                                                                                                                                              ACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCCCTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTTAACAATACTTGCAAAATCTATACCAGGAATC                   <  1:658753/135‑1
                                                                                                                                              ACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCACCAATAACTGCAACATCTATACCAGGAATC                   >  2:355357/1‑135
                                                                                                                                              ACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACTATTCCTGCAAAATCTATACCAGGAATC                   <  1:107689/135‑1
                                                                                                                                                       TATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCCTAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATCCCTGCCAAATCTATACCAGGAATCATGGGATAA          >  1:56607/1‑135
                                                                                                                                                         TTCTGAAAATTCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATTCCTTCAAAATTTATATTATGAATCATAGGATAAgc        <  1:511290/135‑3
                                                                                                                                                          TCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCT       <  1:547746/135‑1
                                                                                                                                                            gGAAAATCCACCCGTATGTGTCACGCCCACATCAGACGCGGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATATCAGGAATCATAGGATAATCTCT     <  1:610384/134‑1
                                                                                                                                                            TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCT     >  2:73509/1‑135
                                                                                                                                                            TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCT     <  2:83003/135‑1
                                                                                                                                                            TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAAAATACCTGCAAAATCTATACCAGGAATCATAGGATAAACTCT     <  2:372141/135‑1
                                                                                                                                                            TGAAAATCCACCGGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCT     >  2:597312/1‑135
                                                                                                                                                               tAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCCTTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  <  2:132881/134‑1
                                                                                                                                                               AAATCCACCTGTATGTGTCACGCAAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  <  2:34731/135‑1
                                                                                                                                                               AAACCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  <  2:196090/135‑1
                                                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                     
AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6420‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  >  CP000731/6553‑6685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.