Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000731 81 N→G intergenic (–/‑151) – / → repA –/replication protein A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000731810NG99.5% 691.3 / NA 207intergenic (–/‑151)–/repA–/replication protein A
Reads supporting (aligned to +/- strand):  ref base N (0/0);  major base G (118/87);  minor base T (0/1);  total (119/88)
Fisher's exact test for biased strand distribution p-value = 4.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 209 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATG  >  CP000731/1‑214
                                                                                                                                     |                                                                                                                                     
tatcaagggtttataaacccttgataaagctttattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                                                                                                                      >  2:154612‑M1/54‑135 (MQ=255)
tatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACCGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                                                                                                                      >  1:439046‑M1/54‑135 (MQ=255)
 atcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                                                                                     <  2:400112‑M1/83‑1 (MQ=255)
 atcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                                                                                     <  1:211251‑M1/83‑1 (MQ=255)
 atcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                                                                                     <  1:19749‑M1/83‑1 (MQ=255)
     agggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTg                                                                                                                                 <  1:148007‑M1/87‑1 (MQ=255)
      gggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                                                                                                                <  1:106486‑M1/88‑1 (MQ=255)
      gggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                                                                                                                <  2:171295‑M1/88‑1 (MQ=255)
        gtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGttt                                                                                                                              <  2:10621‑M1/90‑1 (MQ=255)
        gtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGttt                                                                                                                              >  1:203483‑M1/46‑135 (MQ=255)
         tttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGttta                                                                                                                             >  1:540203‑M1/45‑135 (MQ=255)
          ttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAGTAGTCGGGGTTTGGTAATAAATCGTTTAGAAACTGtttat                                                                                                                            >  1:168814‑M1/44‑135 (MQ=255)
            ataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAAAAAAAACCCCAACTACTGGTAATAGTGGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattt                                                                                                                          <  1:629568‑M1/94‑1 (MQ=255)
               aacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTCGAAACTGTTTATTtata                                                                                                                       <  2:377080‑M1/97‑1 (MQ=255)
               aacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtata                                                                                                                       <  1:631641‑M1/97‑1 (MQ=255)
               aacccttgataaagctatattttaccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtata                                                                                                                       <  1:305449‑M1/97‑1 (MQ=255)
                acccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtatat                                                                                                                      >  1:56002‑M1/38‑135 (MQ=255)
                  ccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATaa                                                                                                                    <  2:517599‑M1/100‑1 (MQ=255)
                   cttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAt                                                                                                                   >  1:356687‑M1/35‑135 (MQ=255)
                   cttgataaacctatattttcccttttataagtttATGTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAt                                                                                                                   >  2:304397‑M1/35‑135 (MQ=255)
                    ttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAtt                                                                                                                  >  1:657862‑M1/34‑135 (MQ=255)
                      gataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAtttt                                                                                                                <  2:421174‑M1/104‑1 (MQ=255)
                          aagatatattttcccttttataagtttATTTAAAGTGCTATAATATACTTAATATAACAAAAACCCCAACTACTGGTAATATTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGAt                                                                                                            <  2:462402‑M1/108‑1 (MQ=255)
                             ctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACt                                                                                                         <  2:404229‑M1/111‑1 (MQ=255)
                               atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATTGCAAAGACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTg                                                                                                       >  1:615183‑M1/23‑135 (MQ=255)
                               atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTTGTGATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTg                                                                                                       >  1:60567‑M1/23‑135 (MQ=255)
                               atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTg                                                                                                       >  1:591189‑M1/23‑135 (MQ=255)
                                 attttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGta                                                                                                     <  1:10906‑M1/115‑1 (MQ=255)
                                 attttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGta                                                                                                     <  2:570989‑M1/115‑1 (MQ=255)
                                    ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTTCTGGTAATAGTCGGGGTTTGGTAATAAATCGTTTAGATTCTGTTTATTTTTATATTTTTCGATACTTGtatta                                                                                                  >  1:158953‑M1/18‑135 (MQ=255)
                                    ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtatta                                                                                                  <  1:76713‑M1/118‑1 (MQ=255)
                                      cccttttttaattttATTTAAAGTGCTATAATTAACTTAATATAACAAAAACCCCATCTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAATCTGTTTATTTATATAATTTTCGATTCTTGTATtata                                                                                                >  2:264021‑M1/16‑135 (MQ=255)
                                        cttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtatata                                                                                              >  1:339784‑M1/14‑135 (MQ=255)
                                         ttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATaa                                                                                             >  1:548104‑M1/13‑135 (MQ=255)
                                         ttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGAGACTTGTATTATATaa                                                                                             >  1:427661‑M1/13‑135 (MQ=255)
                                            tataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGa                                                                                          <  1:315563‑M1/126‑1 (MQ=255)
                                             ggaattttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaa                                                                                         >  2:468119‑M1/9‑135 (MQ=255)
                                                agtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataa                                                                                      <  2:680893‑M1/130‑1 (MQ=255)
                                                 gtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataat                                                                                     <  1:134576‑M1/131‑1 (MQ=255)
                                                  tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAataata                                                                                    <  2:89445‑M1/132‑1 (MQ=255)
                                                   ttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAatat                                                                                   >  2:33047‑M1/3‑135 (MQ=255)
                                                     aTTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATCATGCGCGATACTTGTATTATATAATGAATAATATCt                                                                                 <  2:591353/135‑1 (MQ=255)
                                                     aTTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCt                                                                                 >  1:89961/1‑135 (MQ=255)
                                                       ttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTa                                                                               >  2:561148/1‑135 (MQ=255)
                                                       ttAAAGCGCTATAATAAACTTAATATAACAAACACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTa                                                                               <  1:406723/135‑1 (MQ=255)
                                                         aaaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGt                                                                             <  1:1454/135‑1 (MQ=255)
                                                           aGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTTGACTTCAAGTTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGc                                                                           <  1:448996/135‑1 (MQ=255)
                                                            gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCa                                                                          <  2:133965/135‑1 (MQ=255)
                                                              gCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTTTTATAGAATGAATAATATCTTAGTGCAAg                                                                        <  1:272463/135‑1 (MQ=255)
                                                              gCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAg                                                                        <  1:495385/135‑1 (MQ=255)
                                                                tataATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCa                                                                      <  2:120385/135‑1 (MQ=255)
                                                                tataATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCa                                                                      <  1:511095/135‑1 (MQ=255)
                                                                 ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAc                                                                     <  2:193513/135‑1 (MQ=255)
                                                                 ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAc                                                                     >  2:275999/1‑135 (MQ=255)
                                                                  tactaaACTTAATATAACACAAACCCCCACTACTGGTAATCGTACGGGTTTGATCATGAAAGGTTTAGAAACAGTCTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAcc                                                                    <  2:110380/132‑1 (MQ=255)
                                                                    ttttaCTTATTATAATAAAAACATCAATTGGTGGAAAAAATCGGGGTTTTAATATTAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATAAAATGAATAATATCTTAGTGCAAGCACCTa                                                                  >  1:129993/5‑135 (MQ=255)
                                                                    ataaACTTAATATAAGAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATTAATAATATCTTAGTGCAAGCAccga                                                                  >  2:80696/1‑133 (MQ=255)
                                                                    ataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTa                                                                  >  2:127723/1‑135 (MQ=255)
                                                                    ataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGACGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAACACCTa                                                                  >  1:562340/1‑135 (MQ=255)
                                                                     taaACTTAATATAACAAAAACCCTAACTACTGGGAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACAGTTTATTTATATAATTTTCGATAATTGTATTATATAATGAATAATATCTTAGGCCAAACACCTaa                                                                 >  2:255613/1‑135 (MQ=255)
                                                                     taaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCTAGCGCCTaa                                                                 <  2:439287/135‑1 (MQ=255)
                                                                     taaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCGaa                                                                 <  1:173097/135‑1 (MQ=255)
                                                                     taaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGAAAGCACCTaa                                                                 <  2:646249/135‑1 (MQ=255)
                                                                      aaaCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaaa                                                                >  2:299697/1‑135 (MQ=255)
                                                                           tAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCAtt                                                           <  2:19749/135‑1 (MQ=255)
                                                                             atctaACAAAAACCCCAACTACTGGAAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaa                                                         >  1:390240/4‑135 (MQ=255)
                                                                              tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTCAGTGCAAGGACCTAAATCATtaaa                                                        >  2:605757/1‑135 (MQ=255)
                                                                                  aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaataaa                                                    <  1:182516/135‑1 (MQ=255)
                                                                                    aaaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATg                                                  >  1:644435/1‑135 (MQ=255)
                                                                                    aaaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATg                                                  >  1:675916/1‑135 (MQ=255)
                                                                                     aaaaCCCCTACTACTGGTAATAGTCGGGGTTCGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTAGATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGt                                                 <  1:399224/135‑1 (MQ=255)
                                                                                     aaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGTTACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGt                                                 >  2:245346/1‑135 (MQ=255)
                                                                                        aCCCCAACTACTGGTAATAGTCGGGAATTGATAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTaaa                                              >  1:572784/1‑135 (MQ=255)
                                                                                          cccAACTACGGGTAATGGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTAGATACTTGTATTATATAGTGAATAATATCTTAGTGCAAGCACCTAAATCCATAAATAAATGTAAAGc                                            >  2:411922/1‑135 (MQ=255)
                                                                                            cAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCta                                          >  1:545761/1‑135 (MQ=255)
                                                                                             aaCTTCTGGTAATAGTAGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaa                                         >  1:288213/1‑135 (MQ=255)
                                                                                              actactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaa                                        >  1:374848/1‑135 (MQ=255)
                                                                                              actactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAACCACCTAAATAATTAAATAAATGTAAAACtaat                                        >  2:495053/1‑134 (MQ=255)
                                                                                                tactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaata                                      >  1:499875/1‑135 (MQ=255)
                                                                                                tactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaata                                      >  1:326605/1‑135 (MQ=255)
                                                                                                tactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGAACCTAAATCATCAAATAAATGTAAAGAtaaata                                      >  2:540143/1‑135 (MQ=255)
                                                                                                 actGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTTAAGCtaaataa                                     >  1:482020/1‑135 (MQ=255)
                                                                                                 actGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaataa                                     <  1:142462/135‑1 (MQ=255)
                                                                                                 actGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaataa                                     >  2:335412/1‑135 (MQ=255)
                                                                                                 actGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaataa                                     >  1:232063/1‑135 (MQ=255)
                                                                                                  ctGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaataaa                                    <  2:447834/135‑1 (MQ=255)
                                                                                                    ggTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTCAATCATTAAATAAATGTAAAACTACATaaaaa                                  >  2:207829/1‑135 (MQ=255)
                                                                                                    accagtAGTTGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATaaaaa                                  >  1:552085/6‑135 (MQ=255)
                                                                                                       aaTAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGt                               >  1:417139/1‑135 (MQ=255)
                                                                                                           gTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACATTtta                           >  1:346825/1‑135 (MQ=255)
                                                                                                            tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGAAAGCACCTACATCATTACATACACGTAACGCTAAATACAATCCTTttat                          <  2:31069/135‑1 (MQ=255)
                                                                                                                ggTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTttattatt                      >  2:372638/1‑133 (MQ=255)
                                                                                                                ggTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAACAACTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTttattaac                      >  2:391137/1‑133 (MQ=255)
                                                                                                                    tGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGATTTATTACCTCtt                  >  2:317401/1‑135 (MQ=255)
                                                                                                                     ggTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTa                 <  1:184869/135‑1 (MQ=255)
                                                                                                                       taataaAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAcc               >  1:154227/1‑135 (MQ=255)
                                                                                                                            aaaCGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTTTTACCAAACt          <  1:475237/135‑1 (MQ=255)
                                                                                                                             aaCGTTTATAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTAACTCTTACCAAACTa         <  1:577906/135‑1 (MQ=255)
                                                                                                                                    aaaaACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATg  >  2:352895/1‑135 (MQ=255)
                                                                                                                                    aGAAACTGTTTATTTATATAATTTTCGAAACAAATATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATg  >  1:102090/1‑135 (MQ=255)
                                                                                                                                     |                                                                                                                                     
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATG  >  CP000731/1‑214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑