Predicted mutation
evidence seq id position mutation annotation gene description
JC CP000731 6,552 +TCTCCAGGCACTTGTGCATATTCTGAAA intergenic (+1069/‑419) cadX → / → USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 65520 (0.000)406 (0.900)
+TCTCCAGGCACTTGTGCATATTCTGAAA
139/224 0.2 100% intergenic (+1069/‑419) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator
?CP000731 6553 = 0 (0.000)intergenic (+1070/‑418) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

Only 100 of 530 total aligned reads displayed.

ACACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACCGC  >  CP000731/6413‑6693
                                                                                                                                            |                                                                                                                                            
tttcatgccatatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaa                                                                                                                                              <  2:137098‑M2/1‑1 (MQ=255)
 tgcattccatatttgtctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaAt                                                                                                                                             <  1:463586‑M2/2‑1 (MQ=255)
   cattccatatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATcc                                                                                                                                           >  1:857424‑M2/138‑141 (MQ=255)
      tccatatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCAcc                                                                                                                                        <  2:702153‑M2/7‑1 (MQ=255)
        catatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTg                                                                                                                                      <  1:300439‑M2/9‑1 (MQ=255)
          tatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTa                                                                                                                                    <  2:253444‑M2/11‑1 (MQ=255)
            tttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTAtg                                                                                                                                  <  2:802804‑M2/13‑1 (MQ=255)
             ttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTAtgt                                                                                                                                 <  2:349837‑M2/14‑1 (MQ=255)
                  tagttcaaaaattgataatgctgcagtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCAc                                                                                                                            <  2:958465‑M2/19‑1 (MQ=255)
                   agttcaaaaattgataatgctgccgtaaaaccggctgtgccatatgccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACg                                                                                                                           >  2:1303730‑M2/122‑141 (MQ=255)
                     ttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagaatttaagagagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGcc                                                                                                                         <  1:645020‑M2/22‑1 (MQ=255)
                      tcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCa                                                                                                                        >  1:10020‑M2/119‑141 (MQ=255)
                      tcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCa                                                                                                                        >  1:884571‑M2/119‑141 (MQ=255)
                      tcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCa                                                                                                                        >  1:1375267‑M2/119‑141 (MQ=255)
                      tcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCa                                                                                                                        >  1:18106‑M2/119‑141 (MQ=255)
                       caagaatggataatgctgctgtaaatccggctgtgccatataccatagactctttaatagacatgtcttggggactaggaacaatccaccctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCaa                                                                                                                       <  2:1099093‑M2/24‑1 (MQ=255)
                       caaaaattgataatgctgccgtaaaaccggctgtgccatataccacagactctttgagatacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACTCCaa                                                                                                                       <  1:932042‑M2/24‑1 (MQ=255)
                       caaaaattgataatgcggccgtacaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctcaaggccattgcgcatatcctgacaATCCACCTGTATGTGTCACGCCaa                                                                                                                       <  2:123042‑M2/24‑1 (MQ=255)
                        aaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAc                                                                                                                      >  1:955837‑M2/117‑141 (MQ=255)
                        aaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAc                                                                                                                      <  1:1212188‑M2/25‑1 (MQ=255)
                          aaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACATGTATGTGTAACGCCAacac                                                                                                                    >  1:974518‑M2/115‑140 (MQ=255)
                           aattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAcatc                                                                                                                   <  1:421540‑M2/28‑1 (MQ=255)
                               gataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATaa                                                                                                               >  1:233285‑M2/110‑141 (MQ=255)
                                  aatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCa                                                                                                            <  2:1354704‑M2/35‑1 (MQ=255)
                                      ctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttatgcatattctgaaaATCCACCTGTATGTGTCACTCCAACATCATAACCAGTaa                                                                                                        <  1:360556‑M2/39‑1 (MQ=255)
                                           gtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCCCCTGTATGTGTCACGCCAACATCATAACCAGTAACTAAt                                                                                                   <  2:460335‑M2/44‑1 (MQ=255)
                                           gtaaaaccggctgccccatataacatagactctttaatagacatttctttgggaataggaacaatccactctccaggcacttgtgcatattctgacaCTCCACCTGTATGTGTCACGCCAACATCATAACCAGTATCTAAt                                                                                                   <  2:597841‑M2/44‑1 (MQ=255)
                                             aaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATAc                                                                                                 <  1:119585‑M2/46‑1 (MQ=255)
                                             aaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATAc                                                                                                 <  2:205785‑M2/46‑1 (MQ=255)
                                              aaaccggctgtgccatataccatagactctttaatagacatttcttgggggataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACa                                                                                                >  1:385076‑M2/95‑141 (MQ=255)
                                              aaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACa                                                                                                >  2:935712‑M2/95‑141 (MQ=255)
                                                   ggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATc                                                                                           <  2:426819‑M2/52‑1 (MQ=255)
                                                    gctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCg                                                                                          <  2:882453‑M2/53‑1 (MQ=255)
                                                    gctgtgccatataccatagacgctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCCCCTCTGTGGCTGACGCCGACATCATAACCAGTAACTAATACATTATCg                                                                                          >  1:706637‑M2/89‑141 (MQ=255)
                                                                accatagtctctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAAc                                                                              <  2:1011827‑M2/65‑1 (MQ=255)
                                                                 ccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACt                                                                             >  1:564749‑M2/76‑141 (MQ=255)
                                                                 ccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTGTAAACt                                                                             >  2:274833‑M2/76‑141 (MQ=255)
                                                                     agactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATc                                                                         <  1:254032‑M2/70‑1 (MQ=255)
                                                                      gactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAAATTATCa                                                                        >  1:1051999‑M2/71‑141 (MQ=255)
                                                                       actctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAACCTTATCAt                                                                       >  2:1050148‑M2/70‑141 (MQ=255)
                                                                       actctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCAt                                                                       <  1:589588‑M2/72‑1 (MQ=255)
                                                                             taatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAAc                                                                 <  1:513143‑M2/78‑1 (MQ=255)
                                                                               atagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTACCTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACtt                                                               >  1:541750‑M2/62‑141 (MQ=255)
                                                                               atagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACtt                                                               >  1:670854‑M2/62‑141 (MQ=255)
                                                                                 agacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGa                                                             >  1:907670‑M2/60‑141 (MQ=255)
                                                                                     atttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCCCCAATATTTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCCTCTTTAAACTTATCATTCGAACTTGATTca                                                         <  1:1349767‑M2/86‑1 (MQ=255)
                                                                                     atttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCCTACTAACTGTATTca                                                         <  2:1331165‑M2/86‑1 (MQ=255)
                                                                                      tttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACTAGTAACTATTTCATTATCGCTTTCTTTAAACTTATCATTCGAACTTGATTcaa                                                        <  2:288298‑M2/87‑1 (MQ=255)
                                                                                       ttcttggggaataggaacaatcccctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTcaac                                                       >  1:1080741‑M2/54‑141 (MQ=255)
                                                                                          ttggggaataggaacaatccgctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTTGAACTTgattaaaaact                                                    >  1:436031‑M2/51‑137 (MQ=255)
                                                                                           tggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATa                                                   >  1:752284‑M2/50‑141 (MQ=255)
                                                                                            ggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAc                                                  >  1:291363‑M2/49‑141 (MQ=255)
                                                                                            ggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAc                                                  >  2:726174‑M2/49‑141 (MQ=255)
                                                                                             gggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAcc                                                 <  1:1219997‑M2/94‑1 (MQ=255)
                                                                                             gggaataggaacaatccactctccaggcacttgtccatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAcc                                                 <  2:544255‑M2/94‑1 (MQ=255)
                                                                                              ggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCt                                                <  1:497787‑M2/95‑1 (MQ=255)
                                                                                                aataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATGCGAACTTGATTCAACAATACCTGc                                              <  1:999856‑M2/97‑1 (MQ=255)
                                                                                                 ataggaacaatccactctccaggcacttgtggttattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAACCTTATCATTCGAACTTGATTCAACAATACCTGCa                                             >  2:905706‑M2/44‑141 (MQ=255)
                                                                                                  taggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCaa                                            <  1:1131803‑M2/99‑1 (MQ=255)
                                                                                                   aggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCaaa                                           <  2:174974‑M2/100‑1 (MQ=255)
                                                                                                    ggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCaaaa                                          <  2:221398‑M2/101‑1 (MQ=255)
                                                                                                    ggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCaaaa                                          >  2:764509‑M2/41‑141 (MQ=255)
                                                                                                    ggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCaaaa                                          <  1:332324‑M2/101‑1 (MQ=255)
                                                                                                       acaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCt                                       <  1:1327976‑M2/104‑1 (MQ=255)
                                                                                                        caatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCta                                      <  1:380479‑M2/105‑1 (MQ=255)
                                                                                                         aatccgctctccaggcactggtgcatattctgaaaATCCACCTGTATGTGTCTCGCCAACATCATAACCAGTAACTATTACGTGATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtat                                     <  2:119115‑M2/106‑1 (MQ=255)
                                                                                                          atccactctcccggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtata                                    <  2:1250507‑M2/107‑1 (MQ=255)
                                                                                                          atccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtata                                    >  1:609418‑M2/35‑141 (MQ=255)
                                                                                                          atccactctccaggcacttgtccatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtata                                    <  1:765664‑M2/107‑1 (MQ=255)
                                                                                                           tccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAc                                   <  1:808512‑M2/108‑1 (MQ=255)
                                                                                                            ccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATCCACTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAcc                                  >  1:316465‑M2/33‑141 (MQ=255)
                                                                                                             cactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCa                                 >  1:780845‑M2/32‑141 (MQ=255)
                                                                                                              actctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAACATCTATACcaa                                >  2:843226‑M2/31‑140 (MQ=255)
                                                                                                              actctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAg                                >  1:1168883‑M2/31‑141 (MQ=255)
                                                                                                               ctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAgg                               <  1:734629‑M2/112‑1 (MQ=255)
                                                                                                                     cggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCAt                         <  2:1029066‑M2/118‑1 (MQ=255)
                                                                                                                     aggcacttgtgcatattctgaaaATCCACCTGTATGTGTTACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCAt                         <  2:368886‑M2/118‑1 (MQ=255)
                                                                                                                     aggcacttgtgcatattctaaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCAt                         <  2:52734‑M2/118‑1 (MQ=255)
                                                                                                                       gcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTTACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAg                       >  1:823681‑M2/22‑141 (MQ=255)
                                                                                                                       gcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAg                       >  2:1271813‑M2/22‑141 (MQ=255)
                                                                                                                        cacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAgg                      <  1:208692‑M2/121‑1 (MQ=255)
                                                                                                                        cacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAgg                      <  1:152895‑M2/121‑1 (MQ=255)
                                                                                                                              ctcatatgctgaaaATCCACCTGTATGTGTCACGCGAACCTCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCACTCGAACTTGATTCAACACTACCTGCAAAATCTATACCAGGAATCATAGGATAAtc                <  2:18756‑M2/127‑1 (MQ=255)
                                                                                                                               gcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAAtct               <  2:418874‑M2/128‑1 (MQ=255)
                                                                                                                                 atattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATctct             <  1:1117023‑M2/130‑1 (MQ=255)
                                                                                                                                  tattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTa            >  2:860527‑M2/11‑141 (MQ=255)
                                                                                                                                   attctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTaa           <  2:488251‑M2/132‑1 (MQ=255)
                                                                                                                                   attctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTaa           >  2:739284‑M2/10‑141 (MQ=255)
                                                                                                                                    ttctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAt          <  1:1283273‑M2/133‑1 (MQ=255)
                                                                                                                                     tctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAtt         <  2:1159357‑M2/134‑1 (MQ=255)
                                                                                                                                      ctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCCGCAAAATCTATACCAGGAATCATAGGATAACCTCTAATTa        >  2:318281‑M2/7‑141 (MQ=255)
                                                                                                                                      cagaaaATCCACCTGTACTTCTCACTCCACCATCATAACCAGTACCTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAGCTATACCAGGAATCATAGGATAATCTCTAATTa        <  2:404312‑M2/135‑1 (MQ=255)
                                                                                                                                       tgaaaATCCACCTGTATGTGTCACTCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTac       <  2:1125663‑M2/136‑1 (MQ=255)
                                                                                                                                       tgaaaATCCACCTGTATGTGTCACGTCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCCGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTac       <  2:62007‑M2/136‑1 (MQ=255)
                                                                                                                                       tgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTac       <  1:445626‑M2/136‑1 (MQ=255)
                                                                                                                                       tgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTac       >  1:1031316‑M2/6‑141 (MQ=255)
                                                                                                                                       tgaaaATCCACCTGTATGTGTCACGCCAACATAATAACCAGTAACTAATACATTGTCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAACTCTATACCAGGAATCATAGGGTAATCTCTAATtag       >  1:272689‑M2/6‑140 (MQ=255)
                                                                                                                                        gaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATtacc      >  2:657932‑M2/5‑140 (MQ=255)
                                                                                                                                         aaaATTCACCTTTATGTGTCACGACAACATCATCACTAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTacac     <  2:148302‑M2/138‑1 (MQ=255)
                                                                                                                                         aaaATCCACCTGTATGTGGCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACACTACCTGCAAAATCTAGACCAGGAATCATAGGATAATCTCTAATTacac     <  1:521739‑M2/138‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
ACACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACCGC  >  CP000731/6413‑6693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.