Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	706952	707045	94	2 [1]	[1] 2	mntB	Manganese transport system membrane protein MntB

TGGTACAAATCTGTCGTAGTGTTTATTAAGCTAATAATAATAATCCCCGAAGCTAAGAAAGCGGTAAAACTAATTCCAATAGCGGCGTCAGGTTTCGTTTTACTACTAGATGTGATATAACCGATAAAAATACTTGCGATCATACCAGTTATAAG  >  USA300TCH1516_ALE/706811‑706965                                                                                                                                             |               tGGTACAAATCTGTCGTAGTGTTTATTAAGCTAATAATAATAATCCCCGAAGCTAAGAAAGCGGTAAAACTAATTCCAATAGCGGCGTCAGGTTTCGTTTTACTACTAGATGTGATATAACCGATAAAAATACTTGCGATc                >  1:62172/1‑141 (MQ=255)               cGTAGTGTTTATTAAGCTAATAATAATAATCCCCGAAGCTAAGAAAGCGGTAAAACTAATTCCAATAGCGGCGTCAGGTTTCGTTTTACTACTAGATGTGATATAACCGATAAAAATACTTGCGATCATACCAGTTATAAg  >  2:4920/1‑141 (MQ=255)                                                                                                                                             |               TGGTACAAATCTGTCGTAGTGTTTATTAAGCTAATAATAATAATCCCCGAAGCTAAGAAAGCGGTAAAACTAATTCCAATAGCGGCGTCAGGTTTCGTTTTACTACTAGATGTGATATAACCGATAAAAATACTTGCGATCATACCAGTTATAAG  >  USA300TCH1516_ALE/706811‑706965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑