Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	866020	866077	58	2 [1]	[1] 2	rnr	Ribonuclease R

ACTCAAGTTGTTGGTACGTATAGTGAAGCTAGACATTTTGGCTTTGTTATTCCGGATGATAAACGTATTATGCAAGATATTTTCATTCCTAAAGGTCAAAGTTTAGGCGCAGTCGATGGTCATAAGGTACTTGTACAAATTACTAAGTATGCTGATGGTTCAGATAATCCAGAAGGACAT  >  USA300TCH1516_ALE/865879‑866058                                                                                                                                             |                                        aCTCAAGTTGTTGGTACNTATAGTGAAGCTAGACATTTTGGCTTTGTTATTACGGATGATAAACGTATTATGCAAGATATTTTCATTCCTAAAGGTCAAAGTTTAGGCGCAGTCGATGGTCATAAGGTACTTGTACAAAtt                                         <  1:46903/141‑1 (MQ=255)                                        ggCTTTGTTATTCCGGATGATAAACGTATTATGCAAGATATTTTCATTCCTAAAGGTCAAAGTTTAGGCGCAGTCGATGGTCATAAGGTACTTGTACAAATTACTAAGTATGCTGATGGTTCAGATAATCCAGAAGGACat  >  1:10310/1‑141 (MQ=255)                                                                                                                                             |                                        ACTCAAGTTGTTGGTACGTATAGTGAAGCTAGACATTTTGGCTTTGTTATTCCGGATGATAAACGTATTATGCAAGATATTTTCATTCCTAAAGGTCAAAGTTTAGGCGCAGTCGATGGTCATAAGGTACTTGTACAAATTACTAAGTATGCTGATGGTTCAGATAATCCAGAAGGACAT  >  USA300TCH1516_ALE/865879‑866058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑