Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	887131	887220	90	2 [1]	[1] 2	USA300HOU_RS04350	Organic hydroperoxide resistance protein‑like protein

ATATTGCCAGAAATTTCAATCACGAATAGAAAAAATAACCAACCAAAAATTTTTGGTTGGCAAATTTGAATTTTATGTGAATTTTATTAATAACGTTGAATAATCTCTTTAAGTTAATGCTAATCTACAACATTTACATTTAAATCGACAT  >  USA300TCH1516_ALE/886990‑887140                                                                                                                                             |           atatTGCCAGAAATTTCAATCACGAATAGAAAAAATAACCAACCAAAAATTTTTGGTTGGCAAATTTGAATTTTATGTGAATTTTATTAATAACGTTGAATAATCTCTTTAAGTTAATGCTAATCTACAacatttacattt            <  1:53819/141‑1 (MQ=255)           aaaTTTCAATCACGAATAGAAAAAATAACCAACCAAAAATTTTTGGTTGGCAAATTTGAATTTTATGTGAATTTTATTAATAACGTTGAATAATCTCTTTAAGTTAATGCTAATCTACAACATTTACATTTAAATCGACAt  <  1:11211/141‑1 (MQ=255)                                                                                                                                             |           ATATTGCCAGAAATTTCAATCACGAATAGAAAAAATAACCAACCAAAAATTTTTGGTTGGCAAATTTGAATTTTATGTGAATTTTATTAATAACGTTGAATAATCTCTTTAAGTTAATGCTAATCTACAACATTTACATTTAAATCGACAT  >  USA300TCH1516_ALE/886990‑887140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑